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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948801
Clone id TST38A01NGRL0004_E11
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_E11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CGACGCCAATGCAGGAGAGGTTTATTACAGGCTTATGGCTGGCTACCTTTTTCAGCCATC
AGACATTACATTGGACAAGCTGCTTGCCAAGCTGTCATGTCCACTGTTGCTGTTGTGGGG
AGACTTGGATCCTTGGATGGGATCATCAAAGGTAGAGAAAATTAAAAGCTTATATGGTCC
GACATCCGTTGTGAGATTACAGGCGGGGCATTGTCCTCATGATGAAGCACCCGGGATGGT
TAATGAAGCTTTGATCAAATGGGTTTCTTCCATACAGTGATTCCGGATAAAGGCATTGGC
CGTTTAATTGTAATTATAAAGTAATTGTGTACACAAGGACATTGTCCACACATTGATTTA
CCATAATCCTGTAAAAGCCTGTGAAGTTACTAAAGGTTCCTGGCGACAAATCCACTGCAT
TGCAAAGAATTGAAGGAAGACTCCTAACCTTATTAAGTATAACATTCTGTCAAATGCCAA
CAGGATTGAATGACTACAAAGATCAGATTCCATTTCAAGTAGAGAAACATAACAAATGAA
TTTCAACTA
■■Homology search results ■■ -
sp_hit_id Q25820
Definition sp|Q25820|EFTU_PLAFA Elongation factor Tu, apicoplast OS=Plasmodium falciparum
Align length 94
Score (bit) 33.1
E-value 0.91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948801|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_E11, 5'
         (549 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q25820|EFTU_PLAFA Elongation factor Tu, apicoplast OS=Plasmod...    33   0.91 
sp|Q5NTB3|FA11_BOVIN Coagulation factor XI OS=Bos taurus GN=F11 ...    30   5.9  

>sp|Q25820|EFTU_PLAFA Elongation factor Tu, apicoplast OS=Plasmodium
           falciparum GN=tufA PE=3 SV=1
          Length = 410

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
 Frame = +3

Query: 195 DYRRGIVLMMKHPGWLMK-L*SNGFLPYSDSG*RHWPFNCNYKVIVYTRTLST--H*FTI 365
           D +RG++L   +   + K   +  ++   + G RH PFN  YK   + RT+        I
Sbjct: 298 DIKRGMILATPNKLKVYKSFIAETYILTKEEGGRHKPFNIGYKPQFFIRTVDVTGEIKNI 357

Query: 366 IL*KPVKLLKVPGDKSTALQRIEGRLLTLLSITF 467
            L + V+ + +PGDK T    ++  ++  L++ F
Sbjct: 358 YLNENVQKVAIPGDKITLHIELKHYIVLTLNMKF 391


>sp|Q5NTB3|FA11_BOVIN Coagulation factor XI OS=Bos taurus GN=F11
           PE=1 SV=1
          Length = 625

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 33  LWLATFFSHQTLHWTSCLPSXXXXXXXXGETWILGWDHQR*R 158
           L L T  ++    W  CLPS         E W+ GW +++ R
Sbjct: 484 LKLETAMNYTDSQWPICLPSKGDRNVMYTECWVTGWGYRKLR 525
tr_hit_id A9NP34
Definition tr|A9NP34|A9NP34_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 87
Score (bit) 83.6
E-value 6.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948801|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_E11, 5'
         (549 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NP34|A9NP34_PICSI Putative uncharacterized protein OS=Picea...    84   6e-15
tr|A9NVX3|A9NVX3_PICSI Putative uncharacterized protein OS=Picea...    83   8e-15
tr|Q94K11|Q94K11_ARATH Putative uncharacterized protein unannota...    75   2e-12
tr|O23227|O23227_ARATH Putative uncharacterized protein C7A10.83...    75   2e-12
tr|A7PUS8|A7PUS8_VITVI Chromosome chr4 scaffold_32, whole genome...    75   2e-12
tr|Q6YVH6|Q6YVH6_ORYSJ Os02g0705100 protein OS=Oryza sativa subs...    73   1e-11
tr|A3AAI9|A3AAI9_ORYSJ Putative uncharacterized protein OS=Oryza...    73   1e-11
tr|B4FQV2|B4FQV2_MAIZE Putative uncharacterized protein OS=Zea m...    72   1e-11
tr|A9S8D0|A9S8D0_PHYPA Predicted protein OS=Physcomitrella paten...    72   1e-11
tr|A9PI88|A9PI88_POPTR Putative uncharacterized protein OS=Popul...    71   3e-11
tr|Q0IDM8|Q0IDM8_SYNS3 Hydrolase, alpha/beta fold family protein...    47   5e-04
tr|A3Z4B1|A3Z4B1_9SYNE Putative uncharacterized protein OS=Synec...    47   9e-04
tr|A3YWZ9|A3YWZ9_9SYNE Putative uncharacterized protein OS=Synec...    47   9e-04
tr|A8I0H8|A8I0H8_CHLRE Predicted protein OS=Chlamydomonas reinha...    46   0.001
tr|Q05UD9|Q05UD9_9SYNE Putative uncharacterized protein OS=Synec...    45   0.002
tr|Q46IL4|Q46IL4_PROMT Alpha/beta superfamily hydrolase OS=Proch...    45   0.002
tr|Q3ANA1|Q3ANA1_SYNSC Putative uncharacterized protein OS=Synec...    45   0.002
tr|B0CER8|B0CER8_ACAM1 Hydrolase, alpha/beta fold family protein...    45   0.002
tr|A2C545|A2C545_PROM1 Predicted hydrolases or acyltransferases ...    45   0.002
tr|A5GQ87|A5GQ87_SYNR3 Alpha/beta hydrolase superfamily OS=Synec...    44   0.004
tr|B4VVI7|B4VVI7_9CYAN Hydrolase, alpha/beta fold family, putati...    44   0.004
tr|Q7UZQ9|Q7UZQ9_PROMP Putative uncharacterized protein OS=Proch...    44   0.006
tr|B8HXG3|B8HXG3_9CHRO Alpha/beta hydrolase fold protein OS=Cyan...    44   0.006
tr|A5GI73|A5GI73_SYNPW Alpha/beta hydrolase superfamily OS=Synec...    44   0.007
tr|A2BYY2|A2BYY2_PROM5 Predicted hydrolases or acyltransferases ...    44   0.007
tr|Q7V9S0|Q7V9S0_PROMA Alpha/beta superfamily hydrolase OS=Proch...    43   0.009
tr|Q3M8H5|Q3M8H5_ANAVT Alpha/beta hydrolase fold OS=Anabaena var...    43   0.009
tr|Q318E3|Q318E3_PROM9 Putative uncharacterized protein OS=Proch...    43   0.009
tr|A8G7A4|A8G7A4_PROM2 Predicted hydrolase or acyltransferase (A...    43   0.009
tr|A3PF89|A3PF89_PROM0 Predicted hydrolases or acyltransferases ...    43   0.009

>tr|A9NP34|A9NP34_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 40/87 (45%), Positives = 49/87 (56%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRL+  ++F PS +T                         SK EKIK +Y  
Sbjct: 295 DPNAGEVYYRLITQFMFSPSKVTLNDILEKLSCPLLLLWGDLDPWVGPSKAEKIKEIYPN 354

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKW 262
           +S+V LQAGHCPHDE P +VNEAL+ W
Sbjct: 355 SSLVHLQAGHCPHDEVPDLVNEALLNW 381


>tr|A9NVX3|A9NVX3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 39/87 (44%), Positives = 49/87 (56%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRL+  ++F PS +T                         SK EKIK +Y  
Sbjct: 295 DPNAGEVYYRLITQFMFSPSKVTLNDILEKLSCPLLLLWGDLDPWVGPSKAEKIKEIYPN 354

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKW 262
           +S++ LQAGHCPHDE P +VNEAL+ W
Sbjct: 355 SSLIHLQAGHCPHDEVPDLVNEALLNW 381


>tr|Q94K11|Q94K11_ARATH Putative uncharacterized protein unannotated
           coding sequence from BAC CIC7A10 (At4g36530)
           OS=Arabidopsis thaliana GN=At4g36530 PE=2 SV=1
          Length = 321

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 39/89 (43%), Positives = 47/89 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM  +L   S  T                         +K EKIK+ Y  
Sbjct: 218 DPNAGEVYYRLMTRFLTNQSRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSN 277

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVS 268
           +S+V LQAGHCPHDE P  VN+AL+ W+S
Sbjct: 278 SSLVHLQAGHCPHDEVPEAVNKALLDWLS 306


>tr|O23227|O23227_ARATH Putative uncharacterized protein C7A10.830
           (Putative uncharacterized protein At4g36530) (Putative
           uncharacterized protein) OS=Arabidopsis thaliana
           GN=C7A10.830 PE=2 SV=2
          Length = 378

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 39/89 (43%), Positives = 47/89 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM  +L   S  T                         +K EKIK+ Y  
Sbjct: 275 DPNAGEVYYRLMTRFLTNQSRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSN 334

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVS 268
           +S+V LQAGHCPHDE P  VN+AL+ W+S
Sbjct: 335 SSLVHLQAGHCPHDEVPEAVNKALLDWLS 363


>tr|A7PUS8|A7PUS8_VITVI Chromosome chr4 scaffold_32, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024905001
           PE=4 SV=1
          Length = 311

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 38/90 (42%), Positives = 47/90 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM  ++   S  T                         +K  +IK  Y  
Sbjct: 217 DPNAGEVYYRLMTRFMMNQSKYTLNSVLSKLSCPLLLLWGDLDPWVGPAKANRIKEFYPN 276

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSS 271
           TS+V LQAGHCPHDE P +VN ALI+W+S+
Sbjct: 277 TSLVNLQAGHCPHDEVPELVNGALIEWLSN 306


>tr|Q6YVH6|Q6YVH6_ORYSJ Os02g0705100 protein OS=Oryza sativa subsp.
           japonica GN=P0724B10.43 PE=2 SV=1
          Length = 410

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/91 (40%), Positives = 48/91 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM+ ++   S  T                         +K  +IK  Y  
Sbjct: 304 DPNAGEVYYRLMSRFMANQSRYTLDRLLGKLSCPLLLLWGDLDPWVGPAKAAQIKKFYQD 363

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSSI 274
           T+VV LQAGHCPHDEAP   N AL++W++S+
Sbjct: 364 TTVVNLQAGHCPHDEAPEQFNGALLEWLASL 394


>tr|A3AAI9|A3AAI9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007811 PE=4 SV=1
          Length = 397

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/91 (40%), Positives = 48/91 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM+ ++   S  T                         +K  +IK  Y  
Sbjct: 273 DPNAGEVYYRLMSRFMANQSRYTLDRLLGKLSCPLLLLWGDLDPWVGPAKAAQIKKFYQD 332

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSSI 274
           T+VV LQAGHCPHDEAP   N AL++W++S+
Sbjct: 333 TTVVNLQAGHCPHDEAPEQFNGALLEWLASL 363


>tr|B4FQV2|B4FQV2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 381

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 35/91 (38%), Positives = 48/91 (52%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM+ ++   S  T                         +K  +I+  Y  
Sbjct: 277 DPNAGEVYYRLMSRFMSNQSRYTLDRLLGKMSCPLLLLWGDLDPWVGPAKAARIQEFYAD 336

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSSI 274
           T+VV LQAGHCPHDEAP   N AL++W++++
Sbjct: 337 TAVVHLQAGHCPHDEAPEQANRALLEWLAAL 367


>tr|A9S8D0|A9S8D0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_125747 PE=4 SV=1
          Length = 343

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 39/90 (43%), Positives = 49/90 (54%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NA EVYYRLM   LF+ ++ T                        SSK + IK+LY  
Sbjct: 253 DPNAAEVYYRLMTRVLFKQTNQTINKLLSQLSCPMLLLWGDLDPWMGSSKCDMIKNLYPK 312

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSS 271
            S+VRLQAGHCPHDE P  VN+AL+ + +S
Sbjct: 313 ASMVRLQAGHCPHDEMPEQVNKALLDFANS 342


>tr|A9PI88|A9PI88_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 373

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 34/92 (36%), Positives = 49/92 (53%)
 Frame = +2

Query: 2   DANAGEVYYRLMAGYLFQPSDITXXXXXXXXXXXXXXXXXXXXXXXXSSKVEKIKSLYGP 181
           D NAGEVYYRLM  ++   S  T                         +K  +IK  Y  
Sbjct: 274 DPNAGEVYYRLMTRFMLNQSKYTLNSALSELRCPLLLLWGDLDPWVGPAKANRIKEFYPN 333

Query: 182 TSVVRLQAGHCPHDEAPGMVNEALIKWVSSIQ 277
           +++V L+AGHCPHDE P +VN++L+ W+SS++
Sbjct: 334 STLVNLKAGHCPHDEVPELVNKSLMDWLSSLK 365