BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948675|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_P03, 5'
         (437 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channe...    32   1.2  
sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY, ...    31   2.6  
sp|P0C6V4|R1A_IBVBC Replicase polyprotein 1a OS=Avian infectious...    29   7.5  
sp|P0C6V3|R1A_IBVB Replicase polyprotein 1a OS=Avian infectious ...    29   7.5  
sp|P0C6Y2|R1AB_IBVBC Replicase polyprotein 1ab OS=Avian infectio...    29   7.5  
sp|P0C6Y1|R1AB_IBVB Replicase polyprotein 1ab OS=Avian infectiou...    29   7.5  

>sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channel
           CG34123 OS=Drosophila melanogaster GN=CG34123 PE=1 SV=1
          Length = 2023

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +1

Query: 124 LNRV*ALLPSTSNALLYVFPYSHLLLWVLFYILQASINHLDWMNSAHGLAVRIV 285
           L+ V  LLP TS   L+ FP++ LL+W +    Q  +  L W +    LA  +V
Sbjct: 654 LSLVTGLLPFTSEMALFEFPFNELLIWAVLTKRQ-QMALLMWTHGEEALAKSLV 706


>sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY,
           chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1
          Length = 189

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 151 STSNALLYVFPYSHLLLWVLFYILQASINHLDWMNSAHGLAV 276
           S +  L  + P    + WVL+ ILQ +IN ++ M  + G+ V
Sbjct: 80  SDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESKGIVV 121



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 139 ALLPSTSNALLYVFPYSHLLLWVLFYILQASINHLDWMNS 258
           A   S S   L +   +  LLWVL+ ILQ ++N ++ M S
Sbjct: 148 AAASSDSRGQLLLIVVTPALLWVLYNILQPALNQINKMRS 187


>sp|P0C6V4|R1A_IBVBC Replicase polyprotein 1a OS=Avian infectious
            bronchitis virus (strain Beaudette CK) GN=1a PE=3 SV=1
          Length = 3951

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 49   YLIVRVFTGCSPFCLFCYFRLYLWPLNRV*ALLPSTSNALLYVFPYSHLLL 201
            Y+++ V   C  +   CYF LY W +N+V  L     N  + V  Y ++ L
Sbjct: 3296 YVLMAVMVNCIGWLCTCYFGLYWW-VNKVFGLTLGKYNFKVSVDQYRYMCL 3345


>sp|P0C6V3|R1A_IBVB Replicase polyprotein 1a OS=Avian infectious
            bronchitis virus (strain Beaudette) GN=1a PE=1 SV=1
          Length = 3951

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 49   YLIVRVFTGCSPFCLFCYFRLYLWPLNRV*ALLPSTSNALLYVFPYSHLLL 201
            Y+++ V   C  +   CYF LY W +N+V  L     N  + V  Y ++ L
Sbjct: 3296 YVLMAVMVNCIGWLCTCYFGLYWW-VNKVFGLTLGKYNFKVSVDQYRYMCL 3345


>sp|P0C6Y2|R1AB_IBVBC Replicase polyprotein 1ab OS=Avian infectious
            bronchitis virus (strain Beaudette CK) GN=rep PE=3 SV=1
          Length = 6629

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 49   YLIVRVFTGCSPFCLFCYFRLYLWPLNRV*ALLPSTSNALLYVFPYSHLLL 201
            Y+++ V   C  +   CYF LY W +N+V  L     N  + V  Y ++ L
Sbjct: 3296 YVLMAVMVNCIGWLCTCYFGLYWW-VNKVFGLTLGKYNFKVSVDQYRYMCL 3345


>sp|P0C6Y1|R1AB_IBVB Replicase polyprotein 1ab OS=Avian infectious
            bronchitis virus (strain Beaudette) GN=rep PE=1 SV=1
          Length = 6629

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 49   YLIVRVFTGCSPFCLFCYFRLYLWPLNRV*ALLPSTSNALLYVFPYSHLLL 201
            Y+++ V   C  +   CYF LY W +N+V  L     N  + V  Y ++ L
Sbjct: 3296 YVLMAVMVNCIGWLCTCYFGLYWW-VNKVFGLTLGKYNFKVSVDQYRYMCL 3345

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948675|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_P03, 5'
         (437 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2W139|Q2W139_MAGMM Chemotaxis response regulator protein-glu...    33   7.1  
tr|A7RL73|A7RL73_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.1  

>tr|Q2W139|Q2W139_MAGMM Chemotaxis response regulator
           protein-glutamate methylesterase OS=Magnetospirillum
           magneticum (strain AMB-1 / ATCC 700264) GN=amb3632 PE=4
           SV=1
          Length = 625

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = +1

Query: 28  PAFPTPQYLIVRVFTGCSPFCLFCYFRLYLWPLNRV*ALLPSTSNALLYV 177
           PA P   +L+V  FTG  P   F  FRL+L  L+R+   +P+ S  L Y+
Sbjct: 435 PAGPNQMFLLVADFTGHGPVAAFNVFRLHLL-LSRLPRRMPTPSALLEYL 483


>tr|A7RL73|A7RL73_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g85294 PE=4 SV=1
          Length = 430

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 228 LHQSPRLDEQCTWFGGPYCTIRGAKLSSRFHQGEKHQPKSL 350
           L ++  +D+ C   G PY T+RG +L  R H GE+    SL
Sbjct: 307 LLKTVNIDKSCPVCGKPYSTVRGLQLHLRSHTGERPYSCSL 347