DK948633 |
Clone id |
TST38A01NGRL0003_N08 |
Library |
TST38 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_N08. 5' end sequence. |
Accession |
DK948633 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL4136Contig1 |
Sequence |
CGAGTCATCTCCATGGGCTCCCAGAAAAGCCATCATGTACCTCATTTGTACACCCCTTCC TGCCCAAAAACAACGCATGCCCATGTTCTCCTTCAGGAAAATTGTTGGTTGAAGGGGTGA AGTCTTTGCAAAAGCAGTGAGCATGGCTACATTTCTCTCTCATTAAGCTGGAAGACCATA AACAGGGCATGTTTAAGATCGGTTCCAGCATGTTTACAATCGGTGAACATACATAGTGTA CATAATGGGCTGCGTGCTACTGAAATATGCAAGTTCCGCTGATGAGGAGAAGCAACTTGC AGATTTGCAGGAAACTGAAGGCACAGATTTTCCAGGGAGCAATTATCAGTTTTCCGATAG GAGTCAATGGATGGCATCACAACTTGAGCTCGAGAAGACAAGAGTGAAGGATGTGATTTG GCCAGGTACCCATGACTCCGCAACGGATAAAATTGGATTGCCATACACAACAAGGCCTTT CGCCCAATGCCAAACTCTTTCTATTTACAGACAGCTTCTACAAGGGGTTCGTGTGCTTGA CATCAGAGTAGATCAAGATGGGTTTGTTTGCCATGGCATACTTACAAGCTACAAGATAGA TGTCGTAATTTGTGCTGTGAAGCAATTTTTGAATGAGACGGTGGCAGAGTTTATTATATT GGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P34024 |
Definition |
sp|P34024|PLC_LISMO 1-phosphatidylinositol phosphodiesterase OS=Listeria monocytogenes |
Align length |
101 |
Score (bit) |
57.0 |
E-value |
9.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948633|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_N08, 5' (664 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P34024|PLC_LISMO 1-phosphatidylinositol phosphodiesterase OS=... 57 9e-08 sp|P08954|PLC_BACTU 1-phosphatidylinositol phosphodiesterase OS=... 36 0.16 sp|P14262|PLC_BACCE 1-phosphatidylinositol phosphodiesterase OS=... 36 0.16 sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protei... 33 1.0 sp|O15886|PHLC_TRYCR Variant-surface-glycoprotein phospholipase ... 33 1.0 sp|P09194|PHLC_TRYBB Variant-surface-glycoprotein phospholipase ... 32 3.0 sp|Q567I4|PLCX1_DANRE Phosphatidylinositol-specific phospholipas... 31 5.2 sp|Q8C0V1|CCD79_MOUSE Coiled-coil domain-containing protein 79 O... 31 5.2 sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=... 27 8.2 sp|Q9NUJ7|PLCX1_HUMAN Phosphatidylinositol-specific phospholipas... 30 8.8
>sp|P34024|PLC_LISMO 1-phosphatidylinositol phosphodiesterase OS=Listeria monocytogenes GN=plcA PE=1 SV=1 Length = 317
Score = 57.0 bits (136), Expect = 9e-08 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = +2
Query: 365 QWMASQLELEKTRVKDVIWPGTHDSATDKIGLPYT-TRPFAQCQTLSIYRQLLQGVRVLD 541 QWM++ + T + + PGTHD+ + + +T T+P AQ QT+S+Y+QL G+R +D Sbjct: 47 QWMSALPDT--TNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYID 104
Query: 542 IRVDQDGFVCHG-ILTSYKIDVVICAVKQFLNETVAEFIIL 661 IR + + HG I + + V+ + QFL + E II+ Sbjct: 105 IRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIM 145
>sp|P08954|PLC_BACTU 1-phosphatidylinositol phosphodiesterase OS=Bacillus thuringiensis PE=1 SV=1 Length = 329
Score = 36.2 bits (82), Expect = 0.16 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Frame = +2
Query: 422 PGTHDSATDKIGLPYTTRPFAQCQTLSIYRQLLQGVRVLDIR---VDQDGFVC-HGILTS 589 PGTHDS T K+ P + + Q Q+ G R+ DIR D + V HG L Sbjct: 60 PGTHDSGTFKLQNP-IKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYL 118
Query: 590 Y-KIDVVICAVKQFLNETVAEFIIL 661 Y + I KQFL + +E II+ Sbjct: 119 YVTLHEFINEAKQFLKDNPSETIIM 143
>sp|P14262|PLC_BACCE 1-phosphatidylinositol phosphodiesterase OS=Bacillus cereus PE=1 SV=1 Length = 329
Score = 36.2 bits (82), Expect = 0.16 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Frame = +2
Query: 422 PGTHDSATDKIGLPYTTRPFAQCQTLSIYRQLLQGVRVLDIR---VDQDGFVC-HGILTS 589 PGTHDS T K+ P + + Q Q+ G R+ DIR D + V HG L Sbjct: 60 PGTHDSGTFKLQNP-IKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYL 118
Query: 590 Y-KIDVVICAVKQFLNETVAEFIIL 661 Y + I KQFL + +E II+ Sbjct: 119 YVTLHEFINEAKQFLKDNPSETIIM 143
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1 Length = 819
Score = 33.5 bits (75), Expect = 1.0 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Frame = -3
Query: 536 AHEPLVEAVCK*KEFGIGRKALLCMA-------IQFYPLRSHGYLAKSH-PSLLSSRAQV 381 ++ PL++A CK KE+ I K LL MA I Y + HG + H ++ + ++ Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 380 VMPSIDSYRKTDNCSLENLCLQ---FPANLQVASPHQRNL 270 + + N + LC PA L + RN+ Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
>sp|O15886|PHLC_TRYCR Variant-surface-glycoprotein phospholipase C OS=Trypanosoma cruzi PE=3 SV=1 Length = 380
Score = 33.5 bits (75), Expect = 1.0 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Frame = +2
Query: 479 FAQCQTLSIYRQLLQGVRVLDIRVDQDGFVCHGILT-----SYKIDVVICAVKQFLNETV 643 +++CQ +S+ QL GVR LD+RV + + T S + V+ VK FLN+ + Sbjct: 82 WSRCQWMSVRAQLNHGVRYLDMRVATNPEDASRLYTLHHQISVPLADVLEDVKAFLNDPL 141
Query: 644 A--EFIILE 664 + EFI+L+ Sbjct: 142 SADEFIVLD 150
>sp|P09194|PHLC_TRYBB Variant-surface-glycoprotein phospholipase C OS=Trypanosoma brucei brucei PE=1 SV=1 Length = 358
Score = 32.0 bits (71), Expect = 3.0 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 36/135 (26%) Frame = +2
Query: 368 WMA-SQLELEKTRVKDVIWPGTHDSATDKIGL----------------PYTT-------- 472 WM+ ++ +EK + V G H++ T I + PY T Sbjct: 12 WMSDTRSSIEKKCIGQVYMVGAHNAGTHGIQMFSPFGLDAPEKLRSLPPYVTFLLRFLTV 71
Query: 473 ---RPFAQCQTLSIYRQLLQGVRVLDIRV----DQDG--FVCHGILTSYKIDVVICAVKQ 625 + +CQ LSI + L GVR LD+R+ DQ+ + H S + V+ VK Sbjct: 72 GVSSRWGRCQNLSIRQLLDHGVRYLDLRMNISPDQENKIYTTH-FHISVPLQEVLKDVKD 130
Query: 626 FLNETVA--EFIILE 664 FL + EF+IL+ Sbjct: 131 FLTTPASANEFVILD 145
>sp|Q567I4|PLCX1_DANRE Phosphatidylinositol-specific phospholipase C X domain-containing protein 1 OS=Danio rerio GN=plcxd1 PE=2 SV=1 Length = 309
Score = 31.2 bits (69), Expect = 5.2 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 31/111 (27%) Frame = +2
Query: 422 PGTHDSAT--------------------DKIGLPYTTRP----FAQCQTLSIYRQLLQGV 529 PG+HDS T DK P RP +A Q +I QL G+ Sbjct: 29 PGSHDSMTYCLDKQSSVSNSTPRVVQVLDKY-FPCIVRPCIMKWATTQEGAISNQLDLGI 87
Query: 530 RVLDIRV-------DQDGFVCHGILTSYKIDVVICAVKQFLNETVAEFIIL 661 R LD+R+ D+ + HG+ + + + V ++L++ + E +I+ Sbjct: 88 RFLDLRIAHKIKDPDEVFYFAHGVYSLLTVKEALTEVVRWLDQHIKEVVII 138
>sp|Q8C0V1|CCD79_MOUSE Coiled-coil domain-containing protein 79 OS=Mus musculus GN=Ccdc79 PE=1 SV=1 Length = 768
Score = 31.2 bits (69), Expect = 5.2 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = -1
Query: 631 QKLLHSTNYDIYLVACKYAMANKPILIYSDVKHTNPL*KLSVNRKSLALGERPC 470 +KLL+S N+ +L +C Y + +++ ++ K+ N L K + K + L PC Sbjct: 599 RKLLNSRNFSKFLHSCAYQCVHHKVIMEAEDKYKNELRKTFICAKKILL--TPC 650
>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=2 Length = 3584
Score = 26.6 bits (57), Expect(2) = 8.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3
Query: 315 LKAQIFQGAIISFPIGVNGWHHNLSSR 395 L A + G+II F I N WHH R Sbjct: 3557 LLAGLSTGSIIVFHIDFNRWHHEYQQR 3583
Score = 21.9 bits (45), Expect(2) = 8.2 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1
Query: 169 WKTINRACLRSVPAC 213 W+T N A L + PAC Sbjct: 3527 WRTFNLAPLYAFPAC 3541
>sp|Q9NUJ7|PLCX1_HUMAN Phosphatidylinositol-specific phospholipase C X domain-containing protein 1 OS=Homo sapiens GN=PLCXD1 PE=2 SV=1 Length = 323
Score = 30.4 bits (67), Expect = 8.8 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 11/79 (13%) Frame = +2
Query: 458 LPYTTRP----FAQCQTLSIYRQLLQGVRVLDIRV-------DQDGFVCHGILTSYKIDV 604 LP TRP ++ Q L + QL GVR LD+R+ +++ H + T+ ++ Sbjct: 73 LPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVED 132
Query: 605 VICAVKQFLNETVAEFIIL 661 + + ++L E +IL Sbjct: 133 TLTEISEWLERHPREVVIL 151
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84RB9 |
Definition |
tr|Q84RB9|Q84RB9_BETVU Ki1 protein OS=Beta vulgaris |
Align length |
134 |
Score (bit) |
162.0 |
E-value |
2.0e-38 |
Report |
|