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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948555
Clone id TST38A01NGRL0003_K01
Library
Length 653
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_K01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGCCGTTGTGAGCTGTCGGCCGTCTCTACACGCACGCGCGCGGGCATTCACGGCCGTCTC
CCCCCCCAACACAGAGGCATTCGCGCGCGCGCGCGCACACACACACACACACACACACAC
ACACACACACACACACACACACACACGCCTCGACATCGTCATCCCTGTGGACTCGCCATC
GTTGCTGGAAGAGCTTGTGGATGAGGATCCCCTCCTTGTATACAAATTTCTGCGGCTATT
CAGAGGCTTAAATCCATTATCCTTCGCCCCATATACATCCTCTGCTATTGGATTTATTGT
GTGTAGGTATTTCTGTTTTCAATGCTTGAGAGGGTTTCATGCTTAGACCCAGCTCTGCGA
CTATGCAATGGGCTATGAACCCACCGTGGGATCGGTCCAAGGGTGCAAGGTTGCATCACC
ATTCTAGTGATGCAGAAAGGAGACAGCGGCGGGACCACATGTGCCATTTATCGCTTGTAG
GCAGCACTCTGTGGGTGCTTCTCTTATCGTGTTTCTGGAGCGAAGTACATGGAGATCTAG
CAGCTGATGCAAATGGGCTCACAATATTCAGACAGGCAGTCGATAAGCTCAACAGGCTGC
CATGGAATGCAAGCGATGTGTGCGCATGGCCAGGTATTGTATGCCAAAATGTG
■■Homology search results ■■ -
sp_hit_id O48788
Definition sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana
Align length 65
Score (bit) 38.1
E-value 0.041
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948555|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_K01, 5'
         (653 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g2673...    38   0.041
sp|Q9FHK7|Y5516_ARATH Probable receptor kinase At5g05160 OS=Arab...    34   0.59 
sp|Q9LVI6|RLK90_ARATH Probable inactive receptor kinase RLK902 O...    33   1.7  
sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, c...    30   8.5  
sp|Q9PUU8|LECT1_CHICK Chondromodulin-1 OS=Gallus gallus GN=LECT1...    30   8.5  

>sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730
           OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1
          Length = 658

 Score = 38.1 bits (87), Expect = 0.041
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 459 MCHLSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWNASD-VCAWPG 635
           M  +S V ++L+ +LL      V+ +  A+   L  F Q +   NRL WN SD  C W G
Sbjct: 1   MASISWVLNSLFSILL--LTQRVNSESTAEKQALLTFLQQIPHENRLQWNESDSACNWVG 58

Query: 636 IVCQN 650
           + C +
Sbjct: 59  VECNS 63


>sp|Q9FHK7|Y5516_ARATH Probable receptor kinase At5g05160
           OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1
          Length = 640

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 465 HLSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWNAS-DVC-AWPGI 638
           H + V ++ + LLL+     V  DLA+D   L  F  +V    +L WN +  +C +W GI
Sbjct: 5   HTAFVAASFFFLLLAATAVLVSADLASDEQALLNFAASVPHPPKLNWNKNLSLCSSWIGI 64

Query: 639 VC 644
            C
Sbjct: 65  TC 66


>sp|Q9LVI6|RLK90_ARATH Probable inactive receptor kinase RLK902
           OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1
          Length = 647

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 459 MCHLSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWNASDV--CAWP 632
           M +LS+  S   +LLLS     + GDLAAD + L  FR AV     L W+      C W 
Sbjct: 9   MSNLSIFFS---ILLLSLPLPSI-GDLAADKSALLSFRSAVGG-RTLLWDVKQTSPCNWT 63

Query: 633 GIVC 644
           G++C
Sbjct: 64  GVLC 67


>sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase,
           chloroplastic (Fragment) OS=Vigna aconitifolia GN=PURKE
           PE=2 SV=1
          Length = 557

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 20/53 (37%), Positives = 30/53 (56%)
 Frame = +3

Query: 333 GFMLRPSSATMQWAMNPPWDRSKGARLHHHSSDAERRQRRDHMCHLSLVGSTL 491
           GF L  +   M+ AM  P     GA +H +     R+QR+  MCH+++VGS+L
Sbjct: 321 GFQL--AHQLMKRAMTIP-----GASVHWYDKPEMRKQRK--MCHITIVGSSL 364


>sp|Q9PUU8|LECT1_CHICK Chondromodulin-1 OS=Gallus gallus GN=LECT1
           PE=2 SV=1
          Length = 347

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 314 CFQCLRGFHA*TQLCDYAMGYEPTVGSVQGCKVA 415
           C +C R +    ++C+  +GY P   + QGC+ A
Sbjct: 296 CIECRRSYTQCQRICEPLLGYYPWPYNYQGCRTA 329
tr_hit_id Q6Y2W9
Definition tr|Q6Y2W9|Q6Y2W9_MAIZE Atypical receptor-like kinase MARK OS=Zea mays
Align length 42
Score (bit) 45.8
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948555|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_K01, 5'
         (653 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6Y2W9|Q6Y2W9_MAIZE Atypical receptor-like kinase MARK OS=Zea...    46   0.002
tr|B6U2I0|B6U2I0_MAIZE Atypical receptor-like kinase MARK OS=Zea...    45   0.004
tr|A7P3T8|A7P3T8_VITVI Chromosome chr1 scaffold_5, whole genome ...    39   0.28 
tr|A5AXA6|A5AXA6_VITVI Putative uncharacterized protein OS=Vitis...    39   0.28 
tr|B6SS10|B6SS10_MAIZE Receptor kinase OS=Zea mays PE=2 SV=1           39   0.36 
tr|Q9FL63|Q9FL63_ARATH Receptor-like protein kinase (At5g24100) ...    37   0.81 
tr|Q6ERW2|Q6ERW2_ORYSJ Putative receptor kinase OS=Oryza sativa ...    37   1.4  
tr|Q0J1Z3|Q0J1Z3_ORYSJ Os09g0400500 protein OS=Oryza sativa subs...    37   1.4  
tr|A7PEW8|A7PEW8_VITVI Chromosome chr11 scaffold_13, whole genom...    37   1.4  
tr|A3BYM2|A3BYM2_ORYSJ Putative uncharacterized protein OS=Oryza...    37   1.4  
tr|A2Z123|A2Z123_ORYSI Putative uncharacterized protein OS=Oryza...    37   1.4  
tr|A9RDS4|A9RDS4_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.8  
tr|Q10LW3|Q10LW3_ORYSJ Os03g0332900 protein OS=Oryza sativa subs...    36   2.3  
tr|A3AHM2|A3AHM2_ORYSJ Putative uncharacterized protein OS=Oryza...    36   2.3  
tr|B7ZZP1|B7ZZP1_MAIZE Putative uncharacterized protein OS=Zea m...    35   4.0  
tr|B7ZYR8|B7ZYR8_MAIZE Putative uncharacterized protein OS=Zea m...    35   4.0  
tr|B6SW77|B6SW77_MAIZE Receptor-kinase isolog OS=Zea mays PE=2 SV=1    35   4.0  
tr|A9TI46|A9TI46_PHYPA Predicted protein OS=Physcomitrella paten...    35   4.0  
tr|A9T5W8|A9T5W8_PHYPA Predicted protein (Fragment) OS=Physcomit...    35   4.0  
tr|Q8H811|Q8H811_ORYSJ cDNA clone:J013002E20, full insert sequen...    35   5.2  
tr|Q2LJM2|Q2LJM2_MALDO Putative receptor kinase OS=Malus domesti...    35   5.2  
tr|Q0DTV2|Q0DTV2_ORYSJ Os03g0223000 protein (Fragment) OS=Oryza ...    35   5.2  
tr|Q2R2E4|Q2R2E4_ORYSJ Leucine Rich Repeat family protein, expre...    34   6.8  
tr|A9TG65|A9TG65_PHYPA Predicted protein OS=Physcomitrella paten...    34   6.8  
tr|A3CCG5|A3CCG5_ORYSJ Putative uncharacterized protein OS=Oryza...    34   6.8  
tr|B7P9I9|B7P9I9_IXOSC Ovochymase, putative OS=Ixodes scapularis...    34   6.8  
tr|Q4WRQ0|Q4WRQ0_ASPFU Lactam utilization protein LamB OS=Asperg...    34   6.8  
tr|B0XNG5|B0XNG5_ASPFC Lactam utilization protein LamB OS=Asperg...    34   6.8  
tr|A1D1L5|A1D1L5_NEOFI Lactam utilization protein LamB OS=Neosar...    34   6.8  
tr|A2YPZ9|A2YPZ9_ORYSI Putative uncharacterized protein OS=Oryza...    34   8.9  

>tr|Q6Y2W9|Q6Y2W9_MAIZE Atypical receptor-like kinase MARK OS=Zea
           mays GN=ark PE=2 SV=1
          Length = 694

 Score = 45.8 bits (107), Expect = 0.002
 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
 Frame = +3

Query: 534 DLAADANGLTIFRQAVDKLNRLPWNASDV---CAWPGIVCQN 650
           DLA+DA  L  FR AV +  RL WNASDV   C+W G+ C+N
Sbjct: 36  DLASDARALLAFRDAVGR--RLTWNASDVAGACSWTGVSCEN 75


>tr|B6U2I0|B6U2I0_MAIZE Atypical receptor-like kinase MARK OS=Zea
           mays PE=2 SV=1
          Length = 684

 Score = 45.1 bits (105), Expect = 0.004
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
 Frame = +3

Query: 534 DLAADANGLTIFRQAVDKLNRLPWNASDV---CAWPGIVCQN 650
           DLA+DA  L  FR AV +  RL WNASDV   C+W G+ C++
Sbjct: 32  DLASDARALVAFRDAVGR--RLAWNASDVAGACSWTGVTCEH 71


>tr|A7P3T8|A7P3T8_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030574001
           PE=4 SV=1
          Length = 607

 Score = 38.9 bits (89), Expect = 0.28
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +3

Query: 495 VLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWNASDVCAWPGIVC 644
           +LLL  ++     DL++D   L  FR +V + + L WN +D C+W GI C
Sbjct: 8   LLLLFFYFPPAKPDLSSDRAALLAFRDSV-RGSTLIWNGTDTCSWEGIQC 56


>tr|A5AXA6|A5AXA6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034464 PE=4 SV=1
          Length = 969

 Score = 38.9 bits (89), Expect = 0.28
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +3

Query: 471 SLVGSTLWVLLLSCFWSEVHGD-----LAADANGLTIFRQAV-DKLNRLP-WNASDVCAW 629
           S++G  L +L L       +GD     L +D   L  F+Q + D  NRL  WN S+ C W
Sbjct: 5   SIMGFILPILYLMTIQLACNGDTHFDSLQSDREALIDFKQGLEDPNNRLSSWNGSNYCHW 64

Query: 630 PGIVCQN 650
            GI C+N
Sbjct: 65  XGITCEN 71


>tr|B6SS10|B6SS10_MAIZE Receptor kinase OS=Zea mays PE=2 SV=1
          Length = 643

 Score = 38.5 bits (88), Expect = 0.36
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +3

Query: 480 GSTLWVLLLSCFWS-----EVHGDLAADANGLTIFRQAVDKLNRLPWNASDV--CAWPGI 638
           G   +VLL +  W          DLAAD   L  FR AV +  RLPW+A+    C W G+
Sbjct: 6   GRAAYVLLAAALWCASLTPRAAPDLAADRAALLAFRDAVGQ--RLPWDAAAASPCGWRGV 63

Query: 639 VC 644
            C
Sbjct: 64  RC 65


>tr|Q9FL63|Q9FL63_ARATH Receptor-like protein kinase (At5g24100)
           OS=Arabidopsis thaliana GN=At5g24100 PE=2 SV=1
          Length = 614

 Score = 37.4 bits (85), Expect = 0.81
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 507 SCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWN-ASDVC-AWPGIVC 644
           S  +S+V GDLA D   L  F   +     L WN +S VC  WPG+ C
Sbjct: 20  SALYSQVTGDLAGDRQALLDFLNNIIHPRSLAWNTSSPVCTTWPGVTC 67


>tr|Q6ERW2|Q6ERW2_ORYSJ Putative receptor kinase OS=Oryza sativa
           subsp. japonica GN=P0435D08.38 PE=4 SV=1
          Length = 672

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 468 LSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPW--NASDVCAWPGIV 641
           + +V + LW   L    +    DLAAD   L  FR AV    RLPW  ++S  C W G+ 
Sbjct: 30  VGVVVALLWCAALIGGGAGAGQDLAADTAALLAFRDAVGP--RLPWASSSSSPCGWRGVR 87

Query: 642 C 644
           C
Sbjct: 88  C 88


>tr|Q0J1Z3|Q0J1Z3_ORYSJ Os09g0400500 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0400500 PE=2 SV=1
          Length = 648

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 468 LSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPW--NASDVCAWPGIV 641
           + +V + LW   L    +    DLAAD   L  FR AV    RLPW  ++S  C W G+ 
Sbjct: 6   VGVVVALLWCAALIGGGAGAGQDLAADTAALLAFRDAVGP--RLPWASSSSSPCGWRGVR 63

Query: 642 C 644
           C
Sbjct: 64  C 64


>tr|A7PEW8|A7PEW8_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016817001
           PE=4 SV=1
          Length = 653

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 492 WVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPWNASD-VCAWPGIVC 644
           WV+LLS     V  +   D   L  F   +   NR+ WNASD  C W G+ C
Sbjct: 18  WVVLLS---GRVSSEPTQDKQTLLAFLSQIPHENRIQWNASDSACNWVGVGC 66


>tr|A3BYM2|A3BYM2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028144 PE=4 SV=1
          Length = 612

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 468 LSLVGSTLWVLLLSCFWSEVHGDLAADANGLTIFRQAVDKLNRLPW--NASDVCAWPGIV 641
           + +V + LW   L    +    DLAAD   L  FR AV    RLPW  ++S  C W G+ 
Sbjct: 6   VGVVVALLWCAALIGGGAGAGQDLAADTAALLAFRDAVGP--RLPWASSSSSPCGWRGVR 63

Query: 642 C 644
           C
Sbjct: 64  C 64