DK948547
Clone id TST38A01NGRL0003_J17
Library
Length 681
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_J17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TTTTTGGAAGATTGGTCGAAACCCAACGACTCATGCAAAAACAAGACAATGCATGACCTA
TCTCTGCCTTACTTTTTTTTTTCCACAAAGGAACAGTAGCATGACAGACAAATCAATTGC
AAATCGATTTCAGAAAGTTGATATGGTGGATAATTGGTTTCTCCAATGCTACAAATGGTT
GGACAATGTGAGGACCACACGAAATCTCTTCCTCGTTTCACGAACTTTCGGGTGTAGGAG
GTTTCGCGAAGCTAGCTTCTCCAAGCGACAGAGACTATTTAGGCTTGCGAGCTGGATTTC
TGCCCAGCAGAGACAAACCTGTGTCAACACATAACTTATAATCTTATCAAAATACTTCGG
GATTGCTTAATTCAGTTCTTATTCATCATGTAGTTCTTCCCAATTTTCTAATTTGAAGGA
ATATCTGTAAAAGAAAAGGATTAATCGAGCATCCGGAACCATCTCTCCTCACTTATCTGT
GAAACGAAGGTTGGTATATCAGCGCTTGTTTGCCCTCCAGTTGGGGAACAGTTGGTTAAA
GAGCCCGATGCCGCGAAAGTGGCATGTTGGGTTCAACAAGCAGTTTAAGAATTTGTTTTT
CTATTCCGATCTGCATAACCGAGAATGTCTACGGTTCAAATCCGTATAGCCCTAATCTGT
TTGGAAAGAGAAAAGCTGGGT
■■Homology search results ■■ -
sp_hit_id Q05787
Definition sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase component HRD3 OS=Saccharomyces cerevisiae
Align length 55
Score (bit) 32.7
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948547|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_J17, 5'
(681 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase... 33 1.8
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa... 32 4.1
sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.... 30 9.1

>sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase
component HRD3 OS=Saccharomyces cerevisiae GN=HRD3 PE=1
SV=1
Length = 833

Score = 32.7 bits (73), Expect = 1.8
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2

Query: 458 TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 613
T+ P S K L YQR A QLGN K + K++ GFN + F K+L Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
Length = 69

Score = 31.6 bits (70), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2

Query: 542 SPMPRKWHVGFNKQFKNLFFYSDLHNREC 628
+P +K+ FN + N F DLHNR+C
Sbjct: 10 TPAKKKYDACFNDWYANKFLKGDLHNRDC 38


>sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.
(strain JA-3-3Ab) GN=dnaJ PE=3 SV=1
Length = 394

Score = 30.4 bits (67), Expect = 9.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3

Query: 192 GPHEISSSFHELSGVGGFAKLASPSDRDYLGLRAGFLPSRDKPVSTHNL 338
G +S F + +G+GGFA L ++ G G+ SR PV +L
Sbjct: 74 GAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDL 122


tr_hit_id B6ABI8
Definition tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Cryptosporidium muris RN66
Align length 34
Score (bit) 36.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948547|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_J17, 5'
(681 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Crypt... 37 1.5
tr|Q7PNY4|Q7PNY4_ANOGA Candidate odorant receptor (AGAP006666-PA... 34 9.8

>tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein
OS=Cryptosporidium muris RN66 GN=CMU_027500 PE=4 SV=1
Length = 1841

Score = 36.6 bits (83), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2

Query: 527 NSWLKSPMPRKWHVGFNKQFKNLFFYSDLHNREC 628
N WL P + W VG+NK N ++ S++ N +C
Sbjct: 1626 NGWLTHPCIKSWDVGYNKSLGNKYYNSEILNFDC 1659


>tr|Q7PNY4|Q7PNY4_ANOGA Candidate odorant receptor (AGAP006666-PA)
OS=Anopheles gambiae GN=GPROR48 PE=3 SV=1
Length = 397

Score = 33.9 bits (76), Expect = 9.8
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2

Query: 50 CMTYLCLTFFFPQRNSSMTDKSIANRFQKVDMVDNWFLQCYKWLDNVRTTRNLFLVSRTF 229
C+ LCL F+ RN S+ +IA + + + C+ +L N T N + F
Sbjct: 283 CLLMLCLMLFYITRNHSLNVINIAVLLMSIFIE----MMCFSYLGNQLTEENANISHSAF 338

Query: 230 GCRRFRE 250
CR + E
Sbjct: 339 NCRWYDE 345