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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948500
Clone id TST38A01NGRL0003_H17
Library
Length 670
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_H17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GATATCTCCTTAGCCAATGTGGATCAGCAGGTGAGTTTGAACGGGCCAGTCGCGAGCAGT
CGAGCACTTTGAAGGATTCCGAGAGAAGGAGAGGGGGCCCGAGAGGGAGAAGCTCGTGTT
TGTTTGCAGAAATGGCTGCCATGCAGGCGACATTGGGCGTTTCCTGCCCTTCTTCGTCTC
TATGCAAGTCGTCTTTCTTGGGGAGCGCCTCTCGTCTTTCTCGGGTGGCCTCTGCTATTG
CCCCTTCCCCTGTCCGTGCCTTCAAGGTCGAGGCAAAGAAAGGCGAATGGCTTCCCGGTC
TGGCATCCCCTGCTTACCTAGACGGAAACCTTGCTGGTGACAATGGCTTCGACCCCCTTG
GCTTGGCTGAGGATCCTGCCAACCTTAAATGGTATGTGCAAGCAGAGCTTCAAAATGGAA
GATGGGCAATGCTTGGAGTAGCTGGCATGTTGATCCCCGACCTCTTGACAAAGATTGGTA
TCATCAATGTTCCTGCATGGTATGATGCGGGCAAGGTCGAGTACTTCGCCCCCGCCTCCA
CTCTCTTTGTGATCGAATTCATCTTGTTCCACTATGTGGAGGTGAGAAGATGGCAAGACA
TCAAGTACCCTGGCAGTGTGAATGCCGATCCGTTCAACCCTAAGCTTACTCTGCCCCCTG
GCGAGGTTGG
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 137
Score (bit) 237.0
E-value 5.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948500|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_H17, 5'
         (670 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   237   5e-62
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   231   3e-60
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   173   8e-43
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   160   6e-39
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   155   2e-37
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    94   7e-19
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    94   7e-19
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    91   6e-18
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    91   6e-18
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    85   3e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    83   1e-15
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    77   6e-14
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    68   5e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   2e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   4e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    62   2e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   4e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   6e-09
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   2e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   2e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   3e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   3e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   3e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    58   4e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    58   4e-08
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    58   5e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    58   5e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    58   5e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  237 bits (604), Expect = 5e-62
 Identities = 111/137 (81%), Positives = 122/137 (89%)
 Frame = +3

Query: 258 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 437
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 438 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 617
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 166

Query: 618 VNADPFNPKLTLPPGEV 668
           VN DP   + +LP GEV
Sbjct: 167 VNQDPIFKQYSLPKGEV 183


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  231 bits (588), Expect = 3e-60
 Identities = 109/141 (77%), Positives = 120/141 (85%)
 Frame = +3

Query: 246 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 425
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 426 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 605
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 606 YPGSVNADPFNPKLTLPPGEV 668
            PGSVN DP   + +LP GEV
Sbjct: 162 NPGSVNQDPIFKQYSLPAGEV 182


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  173 bits (438), Expect = 8e-43
 Identities = 90/150 (60%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
 Frame = +3

Query: 219 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 398
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 399 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 575
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 576 VEVRRWQDIKYPGSVNADPFNPKLTLPPGE 665
           VE+RRWQDIK PGSVN DP     +LPP E
Sbjct: 132 VEIRRWQDIKNPGSVNQDPIFKSYSLPPHE 161


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  160 bits (405), Expect = 6e-39
 Identities = 81/150 (54%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
 Frame = +3

Query: 222 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 386
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 387 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 566
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 567 FHYVEVRRWQDIKYPGSVNADPF--NPKLT 650
             + E RRW DI  PG VN DP   N KLT
Sbjct: 161 IGWAEGRRWADIIKPGCVNTDPIFPNNKLT 190



 Score = 33.9 bits (76), Expect = 0.80
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 321 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 488
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  155 bits (392), Expect = 2e-37
 Identities = 73/123 (59%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +3

Query: 288 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 467
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 468 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF--NP 641
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  PG VN DP   N 
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 642 KLT 650
           KLT
Sbjct: 188 KLT 190



 Score = 33.9 bits (76), Expect = 0.80
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 321 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 488
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 94.0 bits (232), Expect = 7e-19
 Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
 Frame = +3

Query: 219 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 380
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 381 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 551
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 552 IEFILFHYVEVRRWQDIKYPGSVNADPFNP 641
            + IL  +VE +RW D   P S + +   P
Sbjct: 146 TQLILMGWVESKRWVDFFDPDSQSVEWATP 175


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 94.0 bits (232), Expect = 7e-19
 Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
 Frame = +3

Query: 213 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 386
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 387 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 527
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 528 APASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 635
           A   TLFV+E  L  + E RR+QD   PGS+    F
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 185



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +3

Query: 291 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 470
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 471 KIG 479
            +G
Sbjct: 247 GVG 249


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 90.9 bits (224), Expect = 6e-18
 Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
 Frame = +3

Query: 273 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 434
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 435 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPG 614
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPD 171

Query: 615 SVNADPFNP 641
           S + +   P
Sbjct: 172 SQSVEWATP 180


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 90.9 bits (224), Expect = 6e-18
 Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
 Frame = +3

Query: 234 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 395
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 396 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 548
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 549 VIEFILFHYVEVRRWQDIKYPGSVNADPF 635
           V+E  L  + E RR+QD   PGS+    F
Sbjct: 159 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 187



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +3

Query: 297 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 476
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 477 G 479
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +3

Query: 273 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 434
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 435 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQD 599
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 176
Score (bit) 246.0
E-value 1.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948500|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_H17, 5'
         (670 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   246   1e-63
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   244   4e-63
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   242   1e-62
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   240   5e-62
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   239   9e-62
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   239   1e-61
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   238   3e-61
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   235   2e-60
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   233   1e-59
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   233   1e-59
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   231   2e-59
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   231   3e-59
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   230   5e-59
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   228   3e-58
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   225   2e-57
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   224   5e-57
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   223   1e-56
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   219   2e-55
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   219   2e-55
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   219   2e-55
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   217   6e-55
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   215   2e-54
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   214   3e-54
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   213   1e-53
tr|B6DYZ8|B6DYZ8_LIQST Chloroplast chlorophyll a-b binding prote...   189   1e-46
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   189   2e-46
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   187   4e-46
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   187   5e-46
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   187   5e-46
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   187   5e-46

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  246 bits (627), Expect = 1e-63
 Identities = 123/176 (69%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = +3

Query: 144 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 320
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 321 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 500
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 501 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEV 668
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP   + +LPP EV
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQYSLPPNEV 181


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  244 bits (623), Expect = 4e-63
 Identities = 116/149 (77%), Positives = 130/149 (87%)
 Frame = +3

Query: 222 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 401
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 402 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 581
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 582 VRRWQDIKYPGSVNADPFNPKLTLPPGEV 668
           +RRWQDIKYPGSVN DP   + +LPP EV
Sbjct: 146 LRRWQDIKYPGSVNQDPLFKQYSLPPNEV 174


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  242 bits (618), Expect = 1e-62
 Identities = 122/176 (69%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
 Frame = +3

Query: 144 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 320
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 321 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 500
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 501 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEV 668
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP EV
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPVFKNYSLPPNEV 181


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  240 bits (613), Expect = 5e-62
 Identities = 112/141 (79%), Positives = 122/141 (86%)
 Frame = +3

Query: 246 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 425
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 426 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 605
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 606 YPGSVNADPFNPKLTLPPGEV 668
            PGSVN DP     +LPP EV
Sbjct: 162 NPGSVNQDPIFKNYSLPPNEV 182


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  239 bits (611), Expect = 9e-62
 Identities = 120/176 (68%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
 Frame = +3

Query: 144 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 320
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 321 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 500
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 501 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEV 668
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP EV
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDPIXKSYSLPPNEV 181


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  239 bits (609), Expect = 1e-61
 Identities = 112/151 (74%), Positives = 125/151 (82%)
 Frame = +3

Query: 213 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 392
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 393 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 572
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 573 YVEVRRWQDIKYPGSVNADPFNPKLTLPPGE 665
           YVE+RRWQDIK PG VN DP     +LPP E
Sbjct: 149 YVEIRRWQDIKNPGCVNQDPIFKNYSLPPNE 179


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  238 bits (607), Expect = 3e-61
 Identities = 112/141 (79%), Positives = 122/141 (86%)
 Frame = +3

Query: 246 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 425
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 426 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 605
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 606 YPGSVNADPFNPKLTLPPGEV 668
            PGSVN DP   + +LP GEV
Sbjct: 162 NPGSVNQDPIFKQYSLPKGEV 182


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  235 bits (599), Expect = 2e-60
 Identities = 110/141 (78%), Positives = 122/141 (86%)
 Frame = +3

Query: 246 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 425
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 426 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 605
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 606 YPGSVNADPFNPKLTLPPGEV 668
            PGSVN DP   + +LPP EV
Sbjct: 162 NPGSVNQDPIFKQYSLPPNEV 182


>tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 250

 Score =  233 bits (593), Expect = 1e-59
 Identities = 106/137 (77%), Positives = 120/137 (87%)
 Frame = +3

Query: 258 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 437
           +FKVEAKKGEWLPGL SP YL+G+LAGDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLG
Sbjct: 45  SFKVEAKKGEWLPGLTSPTYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 438 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 617
           VAGML+P++ T IG++NVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 105 VAGMLLPEVFTSIGLLNVPKWYDAGKSDYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 164

Query: 618 VNADPFNPKLTLPPGEV 668
           VN DP     +LPP EV
Sbjct: 165 VNQDPIFKSYSLPPNEV 181


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  233 bits (593), Expect = 1e-59
 Identities = 107/140 (76%), Positives = 120/140 (85%)
 Frame = +3

Query: 246 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 425
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 426 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 605
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 606 YPGSVNADPFNPKLTLPPGE 665
            PGSVN DP     +LPP +
Sbjct: 162 NPGSVNQDPIFKSYSLPPNK 181