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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948200
Clone id TST38A01NGRL0002_K24
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_K24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATTGAGTTAAAGGTTCTAGCTGCGAATTAGGGTTTGAGTTGTTGCAGAGAGGCGGAGATG
GTGGCGCCGAAGCTCAGAGTTCCCGAGATCGCAGACAATCAAGATGGCTGGGGACCTCCA
GAGGCTGCGGCGGCATTGCAGAATCAACTGCAGAATGTGCCGTACGCACCCTTCTCTAAG
TCTGATCGCTTGGGGAGAGTAGCAGATTTCACAAGAGGAGGATTTCCGTCTCGTGGAGGA
GGTGGAGGAAGAGGAGGGGGCGCTCTTGCTGAATATAGCGTTTTTGATTTCGCTTATGAT
GATGCCGACGAGCTCTCCTTCCGCCTGGTTGATGGTAAGCCCCCTCCCCGTCCTCGTTTT
GGCCCTCGTTGGCGTATGCAGCAGCAGAAGCAGCTCCCTCAGCGTAAAGATGAGGAAGTG
GAGGCTCGCCGCCGGGAGGCTGAGAAGGACAAGCTCCGCCGCGACCGCTTCTACAATCAG
AACCGCAATCAACCTCGCCGTGAGGCTGCTGTATTCCGCAGCTCTGTTGATATTCAGCCC
GAGTGGACCATGCTTGACCAGATCCCCTTCACCACCTTCTCTAAGCTCAGCTTCAATGTT
GGTGAACCTGAAGACATCCTCATGTGTGGTGCCCTTGAGTACTATGACAAGACATATGAT
CGCGT
■■Homology search results ■■ -
sp_hit_id P56820
Definition sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3 subunit D OS=Arabidopsis thaliana
Align length 232
Score (bit) 129.0
E-value 1.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948200|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K24, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3...   129   1e-29
sp|Q7QBW3|EIF3D_ANOGA Eukaryotic translation initiation factor 3...    78   5e-14
sp|Q16UF8|EIF3D_AEDAE Eukaryotic translation initiation factor 3...    77   6e-14
sp|Q0ZB77|EIF3D_BOMMO Eukaryotic translation initiation factor 3...    77   8e-14
sp|Q5KMK1|EIF3D_CRYNE Eukaryotic translation initiation factor 3...    76   2e-13
sp|B4N8Z4|EI3D2_DROWI Eukaryotic translation initiation factor 3...    75   2e-13
sp|B0X6P7|EIF3D_CULQU Eukaryotic translation initiation factor 3...    73   1e-12
sp|B4K892|EI3D1_DROMO Eukaryotic translation initiation factor 3...    72   3e-12
sp|Q6AYK8|EIF3D_RAT Eukaryotic translation initiation factor 3 s...    71   6e-12
sp|O70194|EIF3D_MOUSE Eukaryotic translation initiation factor 3...    71   6e-12
sp|Q3T122|EIF3D_BOVIN Eukaryotic translation initiation factor 3...    71   6e-12
sp|B3LZN3|EI3D2_DROAN Eukaryotic translation initiation factor 3...    71   6e-12
sp|Q5R925|EIF3D_PONAB Eukaryotic translation initiation factor 3...    70   8e-12
sp|Q4R8R4|EIF3D_MACFA Eukaryotic translation initiation factor 3...    70   8e-12
sp|O15371|EIF3D_HUMAN Eukaryotic translation initiation factor 3...    70   8e-12
sp|B4LYI3|EI3D1_DROVI Eukaryotic translation initiation factor 3...    69   2e-11
sp|Q7ZTM9|EIF3D_XENLA Eukaryotic translation initiation factor 3...    69   3e-11
sp|Q295S1|EI3D2_DROPS Eukaryotic translation initiation factor 3...    69   3e-11
sp|B3LY71|EI3D1_DROAN Eukaryotic translation initiation factor 3...    69   3e-11
sp|B4NLG2|EI3D1_DROWI Eukaryotic translation initiation factor 3...    68   4e-11
sp|B4QT07|EI3D2_DROSI Eukaryotic translation initiation factor 3...    68   5e-11
sp|B4HHG8|EI3D2_DROSE Eukaryotic translation initiation factor 3...    68   5e-11
sp|B4GFS1|EI3D2_DROPE Eukaryotic translation initiation factor 3...    67   8e-11
sp|Q6TH15|EIF3D_DANRE Eukaryotic translation initiation factor 3...    67   1e-10
sp|Q6P8G0|EIF3D_XENTR Eukaryotic translation initiation factor 3...    66   1e-10
sp|Q9VGC7|EI3D2_DROME Eukaryotic translation initiation factor 3...    64   9e-10
sp|Q6C1N1|EIF3D_YARLI Eukaryotic translation initiation factor 3...    59   2e-08
sp|B4KDI2|EI3D2_DROMO Eukaryotic translation initiation factor 3...    57   9e-08
sp|Q554U9|EIF3D_DICDI Eukaryotic translation initiation factor 3...    57   1e-07
sp|A7SMR1|EIF3D_NEMVE Eukaryotic translation initiation factor 3...    56   2e-07

>sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3
           subunit D OS=Arabidopsis thaliana GN=TIF3D1 PE=2 SV=1
          Length = 591

 Score =  129 bits (324), Expect = 1e-29
 Identities = 86/232 (37%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
 Frame = +1

Query: 58  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 207
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 208 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 345
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 346 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 507
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 508 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDR 663
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDR 230


>sp|Q7QBW3|EIF3D_ANOGA Eukaryotic translation initiation factor 3
           subunit D OS=Anopheles gambiae GN=eIF3-S7 PE=3 SV=3
          Length = 584

 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
 Frame = +1

Query: 82  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 261
           P++  N+DGWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEDGWGPCELPDAFKD----IPYQPFSKSDRLGKISDWTGTAQTDKKFSNKYASQ 72

Query: 262 --ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXM--QQQKQLPQXXXXXXXXX 429
               ++Y+ F     + DE +F LVD                  +  +  +         
Sbjct: 73  FGGGSQYAYFH----EEDETTFHLVDSARIQKPPHQRGRFRGNMRNNRSGRGRGARGGVQ 128

Query: 430 XXXXXXXXXXXXXFYNQNRNQPRR------EAAVFRSSVDIQPEWTMLDQIPFTTFSKLS 591
                          +Q R   R+         +  +SV ++P+W  ++++ F   +KLS
Sbjct: 129 VGGMTTLSKSANKMRDQRRGTTRKWGMRGPPPKIRDASVTVRPDWVTIEEMDFPRLAKLS 188

Query: 592 F-NVGEPEDILMCGALEYYDKTYDR 663
             +V E EDI+ CG LEYYDKTYDR
Sbjct: 189 LPSVKEGEDIMTCGTLEYYDKTYDR 213


>sp|Q16UF8|EIF3D_AEDAE Eukaryotic translation initiation factor 3
           subunit D OS=Aedes aegypti GN=eIF3-S7 PE=3 SV=1
          Length = 619

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
 Frame = +1

Query: 82  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 261
           P++  N++GWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEEGWGPCELPDAFKD----IPYQPFSKSDRLGKISDWTGTAQTDKKYPNKYASQ 72

Query: 262 ALA--EYSVFDFAYDDADELSFRLVDG-KXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXX 432
                +Y+     Y + DE +F LVD  +               + Q  +          
Sbjct: 73  FGGGNQYAY----YHEEDETTFHLVDSARIQKQPHQRGRFRGNLRNQRGRGRGGRGGVQA 128

Query: 433 XXXXXXXXXXXXFYNQNRNQPRREAA-----VFRSSVDIQPEWTMLDQIPFTTFSKLSF- 594
                         +Q R   R+  A     +  +SV ++P+W  ++++ F   SKLS  
Sbjct: 129 GGMTTLSKNATKGRDQRRGTTRKWGARPPPKIRDASVAVRPDWVTVEEMDFPRLSKLSLP 188

Query: 595 NVGEPEDILMCGALEYYDKTYDR 663
           NV + EDI  CG LEYYDKTYDR
Sbjct: 189 NVEKGEDITTCGTLEYYDKTYDR 211


>sp|Q0ZB77|EIF3D_BOMMO Eukaryotic translation initiation factor 3
           subunit D OS=Bombyx mori GN=eIF3-S7 PE=2 SV=1
          Length = 549

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 60/203 (29%), Positives = 81/203 (39%), Gaps = 9/203 (4%)
 Frame = +1

Query: 82  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 261
           P I DN  GWGP E           +PY PFSK DRLG+++D+T                
Sbjct: 17  PIIQDNPTGWGPYEMPDQFRD----MPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQFG 72

Query: 262 ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXX 441
           A + Y+ F     D DE +F LVD              +Q+  Q  Q             
Sbjct: 73  AGSSYAYFH----DEDESTFHLVD-----------TTRVQKPYQSYQRGRARGQRGRGAR 117

Query: 442 XXXXXXXXXFYNQNRN--------QPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSF- 594
                      N+ R         Q      +  +SV ++P W  ++ + F   +KLS  
Sbjct: 118 GARTPGGMTTLNKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLP 177

Query: 595 NVGEPEDILMCGALEYYDKTYDR 663
            + E EDI+ CG LEYYDK YDR
Sbjct: 178 GIKEGEDIVSCGTLEYYDKAYDR 200


>sp|Q5KMK1|EIF3D_CRYNE Eukaryotic translation initiation factor 3
           subunit D OS=Cryptococcus neoformans GN=CNB01420 PE=3
           SV=1
          Length = 547

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 62/209 (29%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
 Frame = +1

Query: 79  VPEIADNQDG-WGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXX 255
           +P I DN DG WGP             +PYAPFSKSD++ R+AD+               
Sbjct: 6   LPPIHDNSDGSWGPSTSTLPAQFKD--IPYAPFSKSDKITRIADWHDPQAEAAAGTRTAR 63

Query: 256 XX---------ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXX 408
                        AE +VF F +D+ DE SF LVD               +  + +    
Sbjct: 64  TVQSGGRRTAYGAAEGTVFGFVHDE-DEKSFSLVDSGVRVGARGKAPIRGRSVRGVASAR 122

Query: 409 XXXXXXXXXXXXXXXXXXXX----FYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTT 576
                                   + + N+ Q  R+     SSV I PEW +L++I F  
Sbjct: 123 GARGRGGQRGGFSTRGGRGGARGGYGDWNKPQRTRD-----SSVTIGPEWEVLEEIDFNR 177

Query: 577 FSKLSFNVGEPEDILMCGALEYYDKTYDR 663
            SKLS +V +PED+   G ++ YDKT+DR
Sbjct: 178 LSKLSLSVEDPEDLASYGTVQAYDKTFDR 206


>sp|B4N8Z4|EI3D2_DROWI Eukaryotic translation initiation factor 3
           subunit D-2 OS=Drosophila willistoni GN=eIF3-S7-2 PE=3
           SV=1
          Length = 550

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 15/209 (7%)
 Frame = +1

Query: 82  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 261
           P +  N+ GWGP E           VPY PFSKSDRLG++ D+T                
Sbjct: 11  PYMQYNEHGWGPCELDVVD------VPYQPFSKSDRLGKITDWTVTQQDKKFTNKYAS-- 62

Query: 262 ALAEYSVFDFAYDDADELSFRLVDG------KXXXXXXXXXXXXMQQQKQLPQXXXXXXX 423
           +    + + + +++ DE SFRLVD       K                + +         
Sbjct: 63  SFGNNNQYAYFHEEDDE-SFRLVDSVGSKVIKPYQRGRGFRPSVHNNPRNVRNQRGRKGN 121

Query: 424 XXXXXXXXXXXXXXXFYNQNRNQPRREAAVFR--------SSVDIQPEWTMLDQIPFTTF 579
                           Y + R+  R +   +R        SSV +Q +W  + +I F   
Sbjct: 122 AMGNIMGPGLASITQRYGKGRDGRRNQGRKYRNLPARLRESSVVVQSDWVSVKEIDFPRL 181

Query: 580 SKLSF-NVGEPEDILMCGALEYYDKTYDR 663
            KLS  N+ E EDI+ CGAL+YYDK YDR
Sbjct: 182 LKLSLPNMKEGEDIVTCGALDYYDKAYDR 210


>sp|B0X6P7|EIF3D_CULQU Eukaryotic translation initiation factor 3
           subunit D OS=Culex quinquefasciatus GN=eIF3-S7 PE=3 SV=1
          Length = 612

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 56/209 (26%), Positives = 84/209 (40%), Gaps = 15/209 (7%)
 Frame = +1

Query: 82  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 261
           P++  N++GWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEEGWGPCELPDAFRD----IPYQPFSKSDRLGKISDWTGTAQTDKKYSNKYNSQ 72

Query: 262 --ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXX 435
               ++Y+     Y + DE +F LVD                  +               
Sbjct: 73  FGGGSQYAY----YHEEDETTFHLVDSARVQKPPHQRGRFRGNMR-----GNRGRGRGNR 123

Query: 436 XXXXXXXXXXXFYNQNRNQPRREAAVFR------------SSVDIQPEWTMLDQIPFTTF 579
                        N N+ + +R     +            +SV ++P+W  ++++ F   
Sbjct: 124 GGVQGGGMTNLSKNANKGRDQRRGTTRKWGNRMPPPKIRDASVAVRPDWVTIEEMDFPRL 183

Query: 580 SKLSF-NVGEPEDILMCGALEYYDKTYDR 663
           SKLS  +V E EDI  CG LEYYDK YDR
Sbjct: 184 SKLSLPSVKEGEDISTCGTLEYYDKVYDR 212


>sp|B4K892|EI3D1_DROMO Eukaryotic translation initiation factor 3
           subunit D-1 OS=Drosophila mojavensis GN=eIF3-S7-1 PE=3
           SV=1
          Length = 563

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 57/211 (27%), Positives = 79/211 (37%), Gaps = 12/211 (5%)
 Frame = +1

Query: 67  PKLRVPEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXX 246
           P    P +  N+ GWGP E           VPY PFSK+DRLG++ D+T           
Sbjct: 12  PSFEKPTVQFNEKGWGPCELPDTFKD----VPYQPFSKNDRLGKICDWTSTSNNDKKYQN 67

Query: 247 XXXXXALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXX 426
                     + + + Y + DE +F LVD                 +    +        
Sbjct: 68  KYAS-TFGTGNQYAY-YHEEDETTFHLVDTARVQKPPHQRGRFRNMRNS--RSGRGRNAR 123

Query: 427 XXXXXXXXXXXXXXFYNQNRNQPRREAA-----------VFRSSVDIQPEWTMLDQIPFT 573
                           N     PRR              +  SSV ++ +W  ++++ F 
Sbjct: 124 GGLNTHGHGMTTLNSKNVKARDPRRGVGKRFGNRGPPPKMRESSVAVRADWASIEEMDFP 183

Query: 574 TFSKLSF-NVGEPEDILMCGALEYYDKTYDR 663
              KLS  N+ E EDI  CG LEYYDKTYDR
Sbjct: 184 RLMKLSLPNIKEGEDITTCGTLEYYDKTYDR 214


>sp|Q6AYK8|EIF3D_RAT Eukaryotic translation initiation factor 3
           subunit D OS=Rattus norvegicus GN=Eif3d PE=2 SV=1
          Length = 548

 Score = 70.9 bits (172), Expect = 6e-12
 Identities = 58/214 (27%), Positives = 83/214 (38%), Gaps = 16/214 (7%)
 Frame = +1

Query: 70  KLRVPEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXX 249
           K   P I DN  GWGP             +PY PFSK DRLG+VAD+T            
Sbjct: 3   KFMTPVIQDNPSGWGP----CAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNK 58

Query: 250 XXXX--ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXX 423
                   ++Y+ F     + DE SF+LVD                 Q+ L +       
Sbjct: 59  YSSQFGGGSQYAYFH----EEDETSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNM 114

Query: 424 XXXXXXXXXXXXXXXFYNQNRNQPR-------------REAAVFRSSVDIQPEWTMLDQI 564
                             + R Q +             +      SSV+++ +W + +++
Sbjct: 115 VQFNLQTLPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEM 174

Query: 565 PFTTFSKLSF-NVGEPEDILMCGALEYYDKTYDR 663
            F    K+ +  V EP+DI  CGALEYYDK +DR
Sbjct: 175 DFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDR 208


>sp|O70194|EIF3D_MOUSE Eukaryotic translation initiation factor 3
           subunit D OS=Mus musculus GN=Eif3d PE=1 SV=2
          Length = 548

 Score = 70.9 bits (172), Expect = 6e-12
 Identities = 58/214 (27%), Positives = 83/214 (38%), Gaps = 16/214 (7%)
 Frame = +1

Query: 70  KLRVPEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXX 249
           K   P I DN  GWGP             +PY PFSK DRLG+VAD+T            
Sbjct: 3   KFMTPVIQDNPSGWGP----CAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNK 58

Query: 250 XXXX--ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXX 423
                   ++Y+ F     + DE SF+LVD                 Q+ L +       
Sbjct: 59  YSSQFGGGSQYAYFH----EEDETSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNM 114

Query: 424 XXXXXXXXXXXXXXXFYNQNRNQPR-------------REAAVFRSSVDIQPEWTMLDQI 564
                             + R Q +             +      SSV+++ +W + +++
Sbjct: 115 VQFNLQTLPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEM 174

Query: 565 PFTTFSKLSF-NVGEPEDILMCGALEYYDKTYDR 663
            F    K+ +  V EP+DI  CGALEYYDK +DR
Sbjct: 175 DFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDR 208
tr_hit_id A9S6P9
Definition tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 189
Score (bit) 164.0
E-value 6.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948200|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K24, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment) OS=Physcomit...   164   6e-39
tr|A9RBL3|A9RBL3_PHYPA Predicted protein (Fragment) OS=Physcomit...   162   2e-38
tr|B7FLT6|B7FLT6_MEDTR Putative uncharacterized protein OS=Medic...   138   4e-31
tr|Q9FKV6|Q9FKV6_ARATH Eukaryotic translation initiation factor ...   135   2e-30
tr|Q1EPJ8|Q1EPJ8_MUSAC Eukaryotic translation initiation factor ...   134   7e-30
tr|Q8VZ60|Q8VZ60_ARATH Putative translation initiation factor eI...   129   2e-28
tr|B5X0N5|B5X0N5_ARATH At4g20980 OS=Arabidopsis thaliana PE=2 SV=1    129   2e-28
tr|B6U4Q2|B6U4Q2_MAIZE Eukaryotic translation initiation factor ...   126   1e-27
tr|B4G0T3|B4G0T3_MAIZE Putative uncharacterized protein OS=Zea m...   126   1e-27
tr|B4FWK0|B4FWK0_MAIZE Putative uncharacterized protein OS=Zea m...   126   1e-27
tr|Q688X1|Q688X1_ORYSJ cDNA clone:001-031-F02, full insert seque...   117   5e-25
tr|Q0DFW6|Q0DFW6_ORYSJ Os05g0566500 protein (Fragment) OS=Oryza ...   117   5e-25
tr|A2Y7J4|A2Y7J4_ORYSI Putative uncharacterized protein OS=Oryza...   117   5e-25
tr|A9NUG7|A9NUG7_PICSI Putative uncharacterized protein OS=Picea...   104   4e-21
tr|Q9C5Y8|Q9C5Y8_ARATH Initiation factor 3d (Fragment) OS=Arabid...    94   6e-18
tr|A3BS00|A3BS00_ORYSJ Putative uncharacterized protein OS=Oryza...    88   5e-16
tr|A9SLQ4|A9SLQ4_PHYPA Predicted protein (Fragment) OS=Physcomit...    79   3e-13
tr|B3RPZ1|B3RPZ1_TRIAD Putative uncharacterized protein OS=Trich...    77   7e-13
tr|B4DTF8|B4DTF8_HUMAN cDNA FLJ53917, highly similar to Eukaryot...    75   3e-12
tr|B6LDD9|B6LDD9_BRAFL Putative uncharacterized protein OS=Branc...    75   5e-12
tr|B6L088|B6L088_BRAFL Putative uncharacterized protein OS=Branc...    75   5e-12
tr|Q5ZKM9|Q5ZKM9_CHICK Putative uncharacterized protein OS=Gallu...    70   9e-11
tr|B2R7D4|B2R7D4_HUMAN cDNA, FLJ93391, Homo sapiens eukaryotic t...    70   9e-11
tr|B0QYA5|B0QYA5_HUMAN Eukaryotic translation initiation factor ...    70   9e-11
tr|A8MWD3|A8MWD3_HUMAN Putative uncharacterized protein EIF3D OS...    70   9e-11
tr|Q4SAW6|Q4SAW6_TETNG Chromosome 3 SCAF14679, whole genome shot...    69   2e-10
tr|B0CXD3|B0CXD3_LACBS Predicted protein OS=Laccaria bicolor (st...    68   6e-10
tr|Q5DAD4|Q5DAD4_SCHJA SJCHGC06210 protein OS=Schistosoma japoni...    62   4e-08
tr|B7PYZ6|B7PYZ6_IXOSC Eukaryotic translation initiation factor ...    60   9e-08
tr|A8NJB2|A8NJB2_BRUMA Translation initiation factor 3 subunit 7...    55   3e-06

>tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_12801 PE=4 SV=1
          Length = 514

 Score =  164 bits (414), Expect = 6e-39
 Identities = 89/189 (47%), Positives = 105/189 (55%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 276
           N DGWGPP+           VPYAPF KS  LGR +D+T                     
Sbjct: 1   NTDGWGPPDENATLPSQLQNVPYAPFIKSTHLGRASDWTRNPPSRYGQNRGGD------- 53

Query: 277 SVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXXXXXXX 456
            VFD+ +D+ DE SFRLVDGK             QQ+ QLPQ                  
Sbjct: 54  GVFDYFFDEQDEESFRLVDGKPPARPKFGPRWRFQQKPQLPQRKDEEDARRKEAEKERLR 113

Query: 457 XXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGAL 636
               FYNQNRN  RRE A F+SSVDIQP+WTML+QIPF+TF+KL++ VGE ED+ +CGAL
Sbjct: 114 RDK-FYNQNRNLQRRETATFKSSVDIQPDWTMLEQIPFSTFAKLNYFVGEAEDLALCGAL 172

Query: 637 EYYDKTYDR 663
           EYYDKTYDR
Sbjct: 173 EYYDKTYDR 181


>tr|A9RBL3|A9RBL3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_22044 PE=4 SV=1
          Length = 513

 Score =  162 bits (409), Expect = 2e-38
 Identities = 87/189 (46%), Positives = 106/189 (56%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 276
           N DGWGPP+           VPYAPF KS  LGR +D+T                     
Sbjct: 1   NLDGWGPPDENATLPSQLQNVPYAPFIKSTHLGRASDWTRNPPNRFNQNRGD-------- 52

Query: 277 SVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXXXXXXX 456
            VFD+ +D+ DE SFRLVDGK             QQ+ QLPQ                  
Sbjct: 53  GVFDYFFDEQDEESFRLVDGKPPARPKFGPRWRFQQKPQLPQRKDEEDARRKEAEKERLR 112

Query: 457 XXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGAL 636
               FYNQNRN  RRE A F+SSVDIQP+WT+L+QIPF+TF+KL+++VGE ED+ +CGAL
Sbjct: 113 RDK-FYNQNRNLQRRETATFKSSVDIQPDWTILEQIPFSTFAKLNYSVGEAEDLALCGAL 171

Query: 637 EYYDKTYDR 663
           E+YDKTYDR
Sbjct: 172 EFYDKTYDR 180


>tr|B7FLT6|B7FLT6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 297

 Score =  138 bits (347), Expect = 4e-31
 Identities = 82/195 (42%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 276
           N DGWGP E           VP+APFS+SD+LGR+AD+T                  A  
Sbjct: 15  NPDGWGPLESTADNTN----VPFAPFSRSDKLGRIADWTRNFNNNNNPNRSKNPADTA-- 68

Query: 277 SVFDFAYDDA------DELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXX 438
             FDF  D +      D+ SFRLVDGK             Q+Q QLPQ            
Sbjct: 69  --FDFTSDPSFPNFAEDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKRE 126

Query: 439 XXXXXXXXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDI 618
                      Y    N       +F+SSVDIQPEW M DQIPF+TFSKLSF V EPED+
Sbjct: 127 AEKERARRDRHYQSRSNPSNHRRELFKSSVDIQPEWNMHDQIPFSTFSKLSFTVSEPEDL 186

Query: 619 LMCGALEYYDKTYDR 663
           L+CGALE YD++YDR
Sbjct: 187 LLCGALESYDRSYDR 201


>tr|Q9FKV6|Q9FKV6_ARATH Eukaryotic translation initiation factor 3
           subunit 7 OS=Arabidopsis thaliana GN=At5g44320 PE=2 SV=1
          Length = 588

 Score =  135 bits (340), Expect = 2e-30
 Identities = 88/228 (38%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
 Frame = +1

Query: 58  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX------VPYAPFSKSDRLGRVADFTXX 219
           MV     V  +  N DGWGPP+                 VP+A FS+S++LGRVAD+T  
Sbjct: 1   MVFEAFEVGTVPFNSDGWGPPDASDTSSTSVAAANLLPNVPFASFSRSEKLGRVADWTRA 60

Query: 220 XXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXXXXXX 357
                           +  ++FDF+    DE               +FRLVDGK      
Sbjct: 61  LSNPSARPHTGSKSDPS--AIFDFSAFAVDEGFGLTNSGGNADEDAAFRLVDGKPPPRPK 118

Query: 358 XXXXXXMQQ---QKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRN---QPRREAAVFR 519
                   Q   + QLPQ                       YN NRN   Q RREAA F+
Sbjct: 119 FGPKWRFNQYHNRNQLPQRRDEEVEAKKREAEKDRARRDRLYNNNRNNIHQQRREAAAFK 178

Query: 520 SSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDR 663
           SSVDIQPEW ML+QIPF+TFSKLSF V EPED+L+CG LE YD+++DR
Sbjct: 179 SSVDIQPEWNMLEQIPFSTFSKLSFTVSEPEDLLLCGGLESYDRSFDR 226


>tr|Q1EPJ8|Q1EPJ8_MUSAC Eukaryotic translation initiation factor 3
           (EIF-3), putative OS=Musa acuminata GN=MA4_25J11.34 PE=4
           SV=1
          Length = 597

 Score =  134 bits (336), Expect = 7e-30
 Identities = 86/218 (39%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXX---------VPYAPFSKSDRLGRVADFTXXXXXXXXXXXX 249
           N DGWGPPE                    +P+APFS+S++LGRVAD+T            
Sbjct: 11  NTDGWGPPESPAAPLLLSRNDGESTQPANIPFAPFSRSEKLGRVADWTRNPNFGNNAARS 70

Query: 250 XXXXALAEYSVFDFAYDD--------ADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQX 405
               A    +VFDFA D+        AD+ SFRLVDGK             QQ+ QLPQ 
Sbjct: 71  ----AGGRDAVFDFAVDESSALSGAAADDSSFRLVDGKPPPRPKFGPRWRFQQRPQLPQR 126

Query: 406 XXXXXXXXXXXXXXXXXXXXXFYNQNRNQ-----------PRREAAVFRSSVDIQPEWTM 552
                                 Y  N                R+A   +SSVDIQPEWTM
Sbjct: 127 RDEEVEARKREAEKERARRDRLYRLNHRSYASAGGHGAAGSHRDAPARKSSVDIQPEWTM 186

Query: 553 LDQIPFTTFSKLSFNVGE-PEDILMCGALEYYDKTYDR 663
           LDQIPF+TFSKLSF+V + PED+L+CGALE+YD+++DR
Sbjct: 187 LDQIPFSTFSKLSFSVPDPPEDLLVCGALEFYDRSFDR 224


>tr|Q8VZ60|Q8VZ60_ARATH Putative translation initiation factor eIF3
           OS=Arabidopsis thaliana GN=At4g20980 PE=2 SV=1
          Length = 591

 Score =  129 bits (324), Expect = 2e-28
 Identities = 86/232 (37%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
 Frame = +1

Query: 58  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 207
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 208 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 345
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 346 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 507
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 508 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDR 663
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDR 230


>tr|B5X0N5|B5X0N5_ARATH At4g20980 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 591

 Score =  129 bits (324), Expect = 2e-28
 Identities = 86/232 (37%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
 Frame = +1

Query: 58  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 207
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 208 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 345
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 346 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 507
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 508 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDR 663
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDR 230


>tr|B6U4Q2|B6U4Q2_MAIZE Eukaryotic translation initiation factor 3
           subunit 7 OS=Zea mays PE=2 SV=1
          Length = 580

 Score =  126 bits (317), Expect = 1e-27
 Identities = 83/207 (40%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 267
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 268 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 423
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 424 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 585
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 586 LSFNVG-EPEDILMCGALEYYDKTYDR 663
           LSF V  +PED+L+CGA+EYYD+TYDR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDR 210


>tr|B4G0T3|B4G0T3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 580

 Score =  126 bits (317), Expect = 1e-27
 Identities = 83/207 (40%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 267
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 268 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 423
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 424 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 585
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 586 LSFNVG-EPEDILMCGALEYYDKTYDR 663
           LSF V  +PED+L+CGA+EYYD+TYDR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDR 210


>tr|B4FWK0|B4FWK0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 580

 Score =  126 bits (317), Expect = 1e-27
 Identities = 83/207 (40%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
 Frame = +1

Query: 97  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 267
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 268 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 423
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 424 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 585
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 586 LSFNVG-EPEDILMCGALEYYDKTYDR 663
           LSF V  +PED+L+CGA+EYYD+TYDR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDR 210