DK948176 [AcEST]

DK948176
Clone id	TST38A01NGRL0002_J24
Library	TST38
Length	660
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_J24. 5' end sequence.
Accession	DK948176
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1Contig3
Sequence	TGCGGCCTCACTCAATTTTAACACTAATTTAGTGTGTAAGTCTATAATAACAAAGTATTA ATGTAGGAATATAAACTTAATTAAACATCGGAGTCAAATTTTGTACAATCTTTGAAAGAA GAGAAGAAAAAAAACTTTTCTTTCACAACAAAGTTGTGAAAAGATGTCGGACCCCCCTCT TGCTTATCTATTTACGGATGCAACGTAAAAGTGGTAATAAAAAGTAGATTTTTGAGAATA TCTTCCCAAATAGGGATTTTTGCTGGAAATCAATGTTTCCCATCCCAACCGGATTTGAGT TGTCTAAGCCACTTCTCCTTTTTCCAAATCAAATTGAATTGAATAGCAATAATTATTGCT AAATATTTTACCTGAGATACGGGTAGACTTTGGGAGTGGTTGAATAGCTACCTTGTCACA TGGAGTTGATATCATACTTTTTTTTTTCTTTCTCTGTTCCCCTTCTTCACTCAGTAAGGA TAGAGAAATAAAGGATAAATAAATAGATTTGATTGATTACCAGCCTCGCTTCAGTTTGTA GGAACTTACATTCAGCGATCGTCGCTAAATACGTACTATCTGATGCTGATTTTGACAAAT AGTTTCACATCACTTGATTGAAACGAGAGCTATTTATATATACCATACCATTTCAAAAAC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P59594
Definition	sp\|P59594\|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavirus
Align length	61
Score (bit)	30.8
E-value	6.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK948176\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_J24, 5' (660 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P59594\|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavir... 31 6.6 >sp\|P59594\|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavirus GN=S PE=1 SV=1 Length = 1255 Score = 30.8 bits (68), Expect = 6.6 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = +3 Query: 192 LRMQRKSGNKK*IFENIFPNRD---FCWKSMFPI------PTGFELSKPLLLFPNQIELN 344 L + KSGN K + E +F N+D + +K PI P+GF KP+ P I + Sbjct: 170 LDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT 229 Query: 345 S 347 + Sbjct: 230 N 230
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK948176\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_J24, 5' (660 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****