DK948159 [AcEST]

DK948159
Clone id	TST38A01NGRL0002_J07
Library	TST38
Length	614
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_J07. 5' end sequence.
Accession	DK948159
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	-
Sequence	ATCAGCAGTTGGTAGTGGAAACACAGATTTCTTACCAAATTATGGAAATAACATAACAGA AAGCATTTGTCAGCATGTCAAGTGAACCCCTGCAAAGGAGGCTTCTGAAGGTGTTAGGCA TACAAGCCTGATAAAGATAAAGGATCATATGTGTTAAGAGGCGAACCCTATCTCTACGGG GTTTTGCCTCGAATCTCATAGTCATAAAGATTTACGGCTAATGGTCAAAGGTATTATTAA GGAAGAAAAGAGGTAAAGCAGCAGCAACTGTAAATAGGCAAATTCCACTTTCATTATTTA GCAGATTACTCAAAAATGCGAAGCGGATGGTATGATTTATAACAGAACCCAGGAATTCTT GTCAATAGTCTTCAGAAATATCAAGGCTGAAGCTTGAACTGCGATAGAAGTTATTTTGGA ATTACCAAGTAGGGATTGACCCACACTAGATGGGTAACTGTCTTCTAGCACCCTTACTTC CATACCCTTTTTCCCGAGGGATTATCTGCTTCAAGCAGCTTATATATGGATAGGCGGCTC TTGGGCGTTTCCTCGAGGATGTAAATTCCCCATGGAAATGATTATTGATAGTTAAAAAAA AAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK948159\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_J07, 5' (593 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6B637
Definition	tr\|A6B637\|A6B637_VIBPA Gamma-glutamyltransferase OS=Vibrio parahaemolyticus AQ3810
Align length	46
Score (bit)	33.9
E-value	7.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK948159\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_J07, 5' (593 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6B637\|A6B637_VIBPA Gamma-glutamyltransferase OS=Vibrio parah... 34 7.2 >tr\|A6B637\|A6B637_VIBPA Gamma-glutamyltransferase OS=Vibrio parahaemolyticus AQ3810 GN=ggt PE=4 SV=1 Length = 586 Score = 33.9 bits (76), Expect = 7.2 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = +2 Query: 41 YGNNITESICQHVKTPAKEASEGVRHTSLIKIKDHMCEANPIST 178 + N T++I A E S G+ H LIK KD+M ANPI+T Sbjct: 24 FANQATDAI--------APEQSTGLEHKQLIKAKDYMVTAANPIAT 61