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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948104
Clone id TST38A01NGRL0002_G23
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_G23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GATAGATACAAGATGGCTGCTCTACAGATTGTGGGAAGCCTGGCGCCGGGCGCTGCTCCT
GCTCTCTCTCTTCTGCGACCCCGACGTCTATCAACTTCATCCTCTATTCTCCTTCCCCGG
CAATGGGCCCCTTCGCCCACTCGCATGGGGCTCAAAGTTGTACATACTTATGACGCCTCC
TTTGAGCTGAAGCCCGAGTGTGAAGAGATGCTCCACACTTTACTAGATTCTCCCACATTC
AGAAGGCAGGTGTCAGGGCAAGCACCTGAAACAAATACAAGCTTCGAGTATGAGTTCACT
GGCGAGCTTTTTCAACCAGTTCCTTGGAGTGTAACCACCAGACATGGCATGCCACAGGAA
TTTGAAAAGTACTTCAACCACCCGGAGTATGCCATTGTAAATGTTCCTCCAAACTTCATG
TTTAAAGCCAAGATTTTTAGGCCATCCAGATTGTGTGCTGTTTTTAAGAAAGTTGTAAGA
GAACAGCCTGAAGTCTAGTGCAGTGTTGTGGACGTGAGGCCACATACGATGCTTCGTGCA
GAATTTTTACAAGAAGCTTACTTTTTGGTGAGAATCATTGATCATTTCTCATTGGCTGGT
TATCCAATGTAGCANATGTTTGGATTTTAACCGCGACCGCACACCAATTGAAATCTGCAC
AGTTC
■■Homology search results ■■ -
sp_hit_id Q39111
Definition sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana
Align length 70
Score (bit) 31.6
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948104|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_G23, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis th...    32   3.9  
sp|Q9QZJ5|ESR1_MESAU Estrogen receptor OS=Mesocricetus auratus G...    31   5.2  
sp|Q5UQK2|YR406_MIMIV Uncharacterized protein R406 OS=Acanthamoe...    30   8.8  

>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis
           thaliana GN=20ox2 PE=2 SV=1
          Length = 378

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 16/70 (22%), Positives = 30/70 (42%)
 Frame = +1

Query: 127 APSPTRMGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGE 306
           A + T+ G  +V  +  S  L  +   ++ +  D P   +Q + + P  +  +   FTG 
Sbjct: 82  AEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGR 141

Query: 307 LFQPVPWSVT 336
               +PW  T
Sbjct: 142 FSTKLPWKET 151


>sp|Q9QZJ5|ESR1_MESAU Estrogen receptor OS=Mesocricetus auratus
           GN=ESR1 PE=2 SV=1
          Length = 595

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 66  LSSATPTSINFILYSPSPAMGPFAHSHGAQSCTYL 170
           L+S +P+ +  +L+ P P + PF H HG Q   YL
Sbjct: 99  LNSVSPSPL-MLLHPPPPQLSPFLHPHGQQVPYYL 132


>sp|Q5UQK2|YR406_MIMIV Uncharacterized protein R406 OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_R406 PE=4 SV=1
          Length = 191

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 20/62 (32%), Positives = 34/62 (54%)
 Frame = +1

Query: 184 ELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVPWSVTTRHGMPQEF 363
           E+KP+ E M  T  D+    R+ +    ET+ S EY  +G+   PVP++ T  H + ++ 
Sbjct: 24  EIKPKRELMTVTYSDAKIPERRETAWQTETDISAEY--SGKTMDPVPFTPTV-HMLKKKI 80

Query: 364 EK 369
           E+
Sbjct: 81  EE 82
tr_hit_id B1WU07
Definition tr|B1WU07|B1WU07_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142)
Align length 110
Score (bit) 121.0
E-value 4.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948104|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_G23, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1WU07|B1WU07_CYAA5 Putative uncharacterized protein OS=Cyano...   121   4e-26
tr|B4VMM1|B4VMM1_9CYAN Putative uncharacterized protein OS=Micro...   120   1e-25
tr|B2J3U0|B2J3U0_NOSP7 Putative uncharacterized protein OS=Nosto...   115   2e-24
tr|A3IH79|A3IH79_9CHRO Putative uncharacterized protein OS=Cyano...   115   2e-24
tr|B5W025|B5W025_SPIMA Putative uncharacterized protein OS=Arthr...   114   4e-24
tr|B4B1L5|B4B1L5_9CHRO Putative uncharacterized protein OS=Cyano...   114   4e-24
tr|B7KBJ8|B7KBJ8_9CHRO Putative uncharacterized protein OS=Cyano...   111   4e-23
tr|A0ZHA0|A0ZHA0_NODSP Putative uncharacterized protein OS=Nodul...   109   1e-22
tr|A0YL02|A0YL02_9CYAN Putative uncharacterized protein OS=Lyngb...   109   2e-22
tr|B0C4M2|B0C4M2_ACAM1 Putative uncharacterized protein OS=Acary...   107   7e-22
tr|B7JVS4|B7JVS4_SYNP8 Putative uncharacterized protein OS=Synec...   106   1e-21
tr|B4BVV9|B4BVV9_9CHRO Putative uncharacterized protein OS=Cyano...   106   1e-21
tr|Q7NN61|Q7NN61_GLOVI Gll0553 protein OS=Gloeobacter violaceus ...   102   2e-20
tr|A9RW07|A9RW07_PHYPA Predicted protein OS=Physcomitrella paten...    79   2e-13
tr|B4FKA0|B4FKA0_MAIZE Putative uncharacterized protein OS=Zea m...    35   3.2  
tr|A9GMD3|A9GMD3_SORC5 Potassium uptake protein, TrkH family OS=...    34   9.3  
tr|B8MEL0|B8MEL0_9EURO Polyketide synthase, putative OS=Talaromy...    34   9.3  

>tr|B1WU07|B1WU07_CYAA5 Putative uncharacterized protein
           OS=Cyanothece (strain ATCC 51142) GN=cce_2721 PE=4 SV=1
          Length = 109

 Score =  121 bits (303), Expect = 4e-26
 Identities = 56/110 (50%), Positives = 78/110 (70%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           MGLK++  +DA+F L PE +E L  LL +P F +Q+S Q   +N+    +FT  +FQPVP
Sbjct: 1   MGLKIIENFDANFILTPEAKETLFNLLKNPEFVKQISQQL--SNSKASIQFTELIFQPVP 58

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
           +S  T  GMP EFEKY +  E+ I+N+PPNFMFKAKIF+PSRLC +++ +
Sbjct: 59  YSTQTPKGMPPEFEKYHHSDEHIIINIPPNFMFKAKIFKPSRLCTIYRLI 108


>tr|B4VMM1|B4VMM1_9CYAN Putative uncharacterized protein
           OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_2018
           PE=4 SV=1
          Length = 108

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/108 (53%), Positives = 79/108 (73%)
 Frame = +1

Query: 151 LKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVPWS 330
           LK+V+ +D SF L+P+ +  L +LL+  +FR+QV+GQ        + EFT  LFQPVP+S
Sbjct: 4   LKIVNNFDGSFVLEPDAQTHLFSLLNGESFRQQVAGQLH----CQDLEFTELLFQPVPYS 59

Query: 331 VTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
             T  GMP+EFE+Y    +YAI+NVPPNFMFKAKIF PSRLCA+++K+
Sbjct: 60  EGTPKGMPREFEQYHESDDYAIINVPPNFMFKAKIFNPSRLCAIYRKI 107


>tr|B2J3U0|B2J3U0_NOSP7 Putative uncharacterized protein OS=Nostoc
           punctiforme (strain ATCC 29133 / PCC 73102)
           GN=Npun_F1908 PE=4 SV=1
          Length = 109

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/109 (52%), Positives = 73/109 (66%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           M LK+V  +D SF L+ + +E L  LL S  F  Q+  Q        + +FT  +FQPVP
Sbjct: 1   MSLKIVQNFDGSFTLEAQAQETLFNLLTSDAFLNQIRQQLQ----CEQIKFTELIFQPVP 56

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKK 471
           +S+TT  GMP EFEKY    EYAI+NVPPNFMF AKIF+PSRLCA+++K
Sbjct: 57  YSLTTTKGMPAEFEKYHESDEYAIINVPPNFMFSAKIFKPSRLCAIYQK 105


>tr|A3IH79|A3IH79_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. CCY 0110 GN=CY0110_10612 PE=4 SV=1
          Length = 109

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/110 (51%), Positives = 75/110 (68%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           MG K++  +DA+F L  E +E L  LL++  F +Q+S Q  E   S +  FT  LFQPVP
Sbjct: 1   MGFKIIENFDANFILASEAKETLFKLLNNSEFVKQISQQLSEKRISIQ--FTELLFQPVP 58

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
           +S  T  GMPQ+FEKY N  E+ I+NVPP FMFKAKIF PSRLCA+++ +
Sbjct: 59  YSSQTPKGMPQKFEKYHNSDEHIIINVPPTFMFKAKIFNPSRLCAIYRLI 108


>tr|B5W025|B5W025_SPIMA Putative uncharacterized protein
           OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_2117 PE=4 SV=1
          Length = 106

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/110 (50%), Positives = 76/110 (69%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           M LKV+  +D SF L+P+ + +L +LL S TF  Q+  Q          EFT  LFQPVP
Sbjct: 1   MKLKVIENFDGSFTLEPQAKSILFSLLTSDTFINQMRQQTEGNGV----EFTELLFQPVP 56

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
           +S+ T  GMP E E+Y++  +Y IVNVPPN+MF+AKIF+PSRLCA++++V
Sbjct: 57  YSINTPKGMPPELEEYYHSDDYIIVNVPPNYMFQAKIFKPSRLCAIYRRV 106


>tr|B4B1L5|B4B1L5_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_2802 PE=4
           SV=1
          Length = 107

 Score =  114 bits (286), Expect = 4e-24
 Identities = 58/109 (53%), Positives = 71/109 (65%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           MGLK+V  ++ASF L  E +  L  LL S  F  Q+S Q        + EFT  LFQPVP
Sbjct: 1   MGLKIVKNFEASFTLSQEAKTRLFELLQSADFLGQISQQLQGA----KIEFTELLFQPVP 56

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKK 471
           +S  T  GMP E E YFN  +Y I+NVPPNFMFKAK+F PSRLCA+++K
Sbjct: 57  YSQETPKGMPPELESYFNSEDYVIINVPPNFMFKAKVFNPSRLCAIYRK 105


>tr|B7KBJ8|B7KBJ8_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7424 GN=PCC7424_4614 PE=4 SV=1
          Length = 111

 Score =  111 bits (278), Expect = 4e-23
 Identities = 58/109 (53%), Positives = 69/109 (63%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           M LK+V  ++ASF L PE EE+L  LL+   F  Q+S Q          EFT  LFQPVP
Sbjct: 1   MNLKIVENFEASFSLSPEAEEVLFKLLEDEQFLGQISQQVKAIGV----EFTKLLFQPVP 56

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKK 471
           +S  T  GM  EFE Y    +Y I+NVPP FMFKAKIF PSRLCA++KK
Sbjct: 57  YSQKTPKGMLPEFETYHYSEDYIIINVPPQFMFKAKIFNPSRLCAIYKK 105


>tr|A0ZHA0|A0ZHA0_NODSP Putative uncharacterized protein
           OS=Nodularia spumigena CCY 9414 GN=N9414_14398 PE=4 SV=1
          Length = 124

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/111 (47%), Positives = 75/111 (67%)
 Frame = +1

Query: 142 RMGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPV 321
           +M  K++  +D+SF L+ + +E L  LL + +F +Q+  Q+       + EFT  LFQPV
Sbjct: 17  KMPFKIIQNFDSSFTLEAQAQETLFNLLKNQSFIQQIRQQSK----CEKVEFTELLFQPV 72

Query: 322 PWSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
           P+S +T  GMP E EKY    EY I+NVPPNFMF AKIF+PSRLCA+++K+
Sbjct: 73  PYSFSTPKGMPAELEKYNESDEYVIINVPPNFMFNAKIFQPSRLCAIYQKI 123


>tr|A0YL02|A0YL02_9CYAN Putative uncharacterized protein OS=Lyngbya
           sp. PCC 8106 GN=L8106_09646 PE=4 SV=1
          Length = 106

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/110 (50%), Positives = 74/110 (67%)
 Frame = +1

Query: 145 MGLKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVP 324
           M +++V  +DA F L P+ + +L  LL S +F  QVS    +       EFT  LFQP+P
Sbjct: 1   MRIRIVENFDADFILDPQVKTILFNLLTSESFLNQVS----QPVNGKAVEFTELLFQPIP 56

Query: 325 WSVTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
           +SV T  GMP+EFE+Y    +Y IVNVPPNFMF+AKIF+PSRLCA+++ V
Sbjct: 57  YSVQTPKGMPREFEQYHESEDYIIVNVPPNFMFQAKIFQPSRLCAIYRLV 106


>tr|B0C4M2|B0C4M2_ACAM1 Putative uncharacterized protein
           OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_4934
           PE=4 SV=1
          Length = 108

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/108 (47%), Positives = 73/108 (67%)
 Frame = +1

Query: 151 LKVVHTYDASFELKPECEEMLHTLLDSPTFRRQVSGQAPETNTSFEYEFTGELFQPVPWS 330
           LK++  +D SF L PE +  L  LL++  F +QV+ ++     S   EFT  +FQPVP+S
Sbjct: 4   LKIIDNFDGSFTLDPEIKAALFNLLNNEGFLQQVARESQ----SEAIEFTELIFQPVPYS 59

Query: 331 VTTRHGMPQEFEKYFNHPEYAIVNVPPNFMFKAKIFRPSRLCAVFKKV 474
             T  GMPQ FE+Y    +Y I+NVPPNFMF+AK+F PSRLCA+++++
Sbjct: 60  ANTPKGMPQLFEQYHESEDYVIINVPPNFMFQAKVFSPSRLCAIYRRI 107