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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948017
Clone id TST38A01NGRL0002_D02
Library
Length 638
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_D02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTTTATGCTCAATTTCGCGAAGAGGAGCAGGCAGCAGCAGCGTTGCAAGGATTGACGGGA
AGATTCTATGCTGGGCGGCCAATTATTGTGGACTTTTCTCCTGTAACAGACTTTAGGGAA
GCCACTTGCAGACAGTATGAGGAAAACACCTGTAACCGTGGCGGTTACTGCAATTTTATG
CATTTGAAGAAGACCAGCAGGGAAATGCGAAAGAGGTTGTTTGGAAACCACAGGAGGCAC
AGCCGCAGTCGGAGTAGAAGTCGCAGTCCGCGCAGGGAGTATGATAGGCGTGAGAAGTAT
CAGGATAATAATCTTGGTGGCTTTGGTGGGGGTGGGGGTAGAGGTTTTAGGCCGGACAGG
AATGGTGTAGATGAGCGCAGATATGATCGAGACGACCGAAGACCTCGAAGGAGAGATCAA
GATAGAGGTAACAGCCCTCATGGTGGTCGCAGAAACAGAAGCCCAGTTAGGGAGGGCAGT
GCAGAGCGTCGAGCTAAGATCGAGCAATGGAATAGAGAGCGTGAAGAACTACNACGCGGA
ACTGCTAGCAGACAGGAGCAGTGATCAGGTATGTTTGCAGATGCTATTTAGTTATTTCCT
GAAGTTCGGGCATGATTATGGACTTTTCTCCGTTGCTT
■■Homology search results ■■ -
sp_hit_id Q9ZQW8
Definition sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica
Align length 158
Score (bit) 132.0
E-value 1.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948017|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_D02, 5'
         (638 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Or...   132   1e-30
sp|Q6AUG0|U2AFB_ORYSJ Splicing factor U2af small subunit B OS=Or...   108   3e-23
sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus...    84   5e-16
sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Hom...    84   5e-16
sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos...    84   5e-16
sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit OS=Dro...    81   5e-15
sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos...    78   4e-14
sp|Q7TP17|U2AF4_RAT Splicing factor U2AF 26 kDa subunit OS=Rattu...    77   8e-14
sp|Q8BGJ9|U2AF4_MOUSE Splicing factor U2AF 26 kDa subunit OS=Mus...    77   8e-14
sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Hom...    73   1e-12
sp|Q09176|U2AF1_SCHPO Splicing factor U2AF 23 kDa subunit OS=Sch...    73   1e-12
sp|Q62377|U2AFM_MOUSE U2 small nuclear ribonucleoprotein auxilia...    49   2e-05
sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxilia...    49   2e-05
sp|Q15695|U2AFL_HUMAN U2 small nuclear ribonucleoprotein auxilia...    49   2e-05
sp|Q64707|U2AFL_MOUSE U2 small nuclear ribonucleoprotein auxilia...    49   3e-05
sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein...    43   0.002
sp|Q6BYU0|CWC24_DEBHA Pre-mRNA-splicing factor CWC24 OS=Debaryom...    33   1.2  
sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C OS...    31   4.7  
sp|Q12000|TMA46_YEAST Translation machinery-associated protein 4...    30   8.1  
sp|Q5REK4|PLAC8_PONAB Placenta-specific gene 8 protein OS=Pongo ...    30   8.1  
sp|Q9NZF1|PLAC8_HUMAN Placenta-specific gene 8 protein OS=Homo s...    30   8.1  
sp|P27606|OMCA_CHLPS Small cysteine-rich outer membrane protein ...    30   8.1  
sp|Q6DBU8|LIPH_DANRE Lipase member H OS=Danio rerio GN=liph PE=2...    30   8.1  
sp|Q9P272|K1456_HUMAN Putative methyltransferase KIAA1456 OS=Hom...    30   8.1  
sp|Q75K81|C3H36_ORYSJ Zinc finger CCCH domain-containing protein...    30   8.1  

>sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Oryza
           sativa subsp. japonica GN=U2AF35A PE=2 SV=1
          Length = 290

 Score =  132 bits (333), Expect = 1e-30
 Identities = 70/158 (44%), Positives = 85/158 (53%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           LTGR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNFMH+K+  R++RKRLFG+ 
Sbjct: 129 LTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHL 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                +  D                  +                
Sbjct: 189 HRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRS 248

Query: 412 XXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNRERE 525
                G+      R RSPVR+GS ERRA+IEQWNRERE
Sbjct: 249 SYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNRERE 286


>sp|Q6AUG0|U2AFB_ORYSJ Splicing factor U2af small subunit B OS=Oryza
           sativa subsp. japonica GN=U2AF35B PE=2 SV=1
          Length = 304

 Score =  108 bits (269), Expect = 3e-23
 Identities = 67/177 (37%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNFMH+K+  RE+R++L+G  
Sbjct: 129 LQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLYGGR 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                               ++   ++               R G               
Sbjct: 189 SRRSHGRSRSPSPRHRRGNRDR---DDFRRERDGYRGGGDGYRGGGGGGGGDGYRGGDSY 245

Query: 412 XXXXXGNSPHGGRR-----NRSPVREGSAERR-------------AKIEQWNREREE 528
                G    GG R     +    R GS  RR             AKIEQWNREREE
Sbjct: 246 RGGGGGGRRGGGSRYDRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQWNREREE 302


>sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus
           musculus GN=U2af1 PE=2 SV=4
          Length = 239

 Score = 84.3 bits (207), Expect = 5e-16
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK  SRE+R+ L+G
Sbjct: 130 LNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187


>sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Homo
           sapiens GN=U2AF1 PE=1 SV=3
          Length = 240

 Score = 84.3 bits (207), Expect = 5e-16
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK  SRE+R+ L+G
Sbjct: 130 LNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187


>sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos
           taurus GN=U2AF1 PE=2 SV=1
          Length = 237

 Score = 84.3 bits (207), Expect = 5e-16
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK  SRE+R+ L+G
Sbjct: 130 LNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187


>sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit
           OS=Drosophila melanogaster GN=U2af38 PE=1 SV=2
          Length = 264

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLF 222
           L  R++ GRP+  + SPVTDFREA CRQYE   C R G+CNFMHLK  SRE+R+ L+
Sbjct: 132 LNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188


>sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos
           taurus GN=U2AF1L4 PE=2 SV=1
          Length = 220

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 31/58 (53%), Positives = 44/58 (75%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+  SR++R++L+G
Sbjct: 130 LNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLYG 187


>sp|Q7TP17|U2AF4_RAT Splicing factor U2AF 26 kDa subunit OS=Rattus
           norvegicus GN=U2af1l4 PE=2 SV=1
          Length = 220

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+  SR +R++L+G
Sbjct: 130 LNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187


>sp|Q8BGJ9|U2AF4_MOUSE Splicing factor U2AF 26 kDa subunit OS=Mus
           musculus GN=U2af1l4 PE=1 SV=1
          Length = 220

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L  R++ G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+  SR +R++L+G
Sbjct: 130 LNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187


>sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Homo
           sapiens GN=U2AF1L4 PE=1 SV=2
          Length = 220

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFG 225
           L+ R++ G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+  S+ ++++L+G
Sbjct: 130 LSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYG 187
tr_hit_id A9NVR9
Definition tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 175
Score (bit) 154.0
E-value 6.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948017|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_D02, 5'
         (638 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea...   154   6e-36
tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome...   152   2e-35
tr|Q99L29|Q99L29_MOUSE cDNA sequence BC003883 OS=Mus musculus GN...   142   2e-32
tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment) OS=Physcomit...   142   2e-32
tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella paten...   141   3e-32
tr|Q9FMY5|Q9FMY5_ARATH U2 snRNP auxiliary factor, small subunit ...   134   5e-30
tr|B7E7L8|B7E7L8_ORYSJ cDNA clone:001-044-E06, full insert seque...   132   1e-29
tr|A2Z2M2|A2Z2M2_ORYSI Putative uncharacterized protein OS=Oryza...   132   1e-29
tr|A7QPI3|A7QPI3_VITVI Chromosome chr18 scaffold_137, whole geno...   132   2e-29
tr|Q9S709|Q9S709_ARATH T22C5.10 (At1g27650/T22C5_2) (Putative U2...   131   4e-29
tr|A8MRI1|A8MRI1_ARATH Uncharacterized protein At1g27650.2 OS=Ar...   131   4e-29
tr|Q945S0|Q945S0_ARATH U2 auxiliary factor small subunit OS=Arab...   130   5e-29
tr|Q2QKB5|Q2QKB5_WHEAT U2AF small subunit OS=Triticum aestivum P...   128   3e-28
tr|B6TRJ7|B6TRJ7_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze...   128   3e-28
tr|B6T3Q5|B6T3Q5_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze...   125   2e-27
tr|Q945S1|Q945S1_ARATH U2 auxiliary factor small subunit OS=Arab...   125   3e-27
tr|B6T7D3|B6T7D3_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze...   124   6e-27
tr|B6TCE1|B6TCE1_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze...   121   4e-26
tr|B6SY08|B6SY08_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze...   121   4e-26
tr|B4FAF4|B4FAF4_MAIZE Putative uncharacterized protein OS=Zea m...   121   4e-26
tr|Q1H8Q9|Q1H8Q9_CHERU Putative U2 snRNP auxiliary factor (Fragm...   117   6e-25
tr|A8HYQ9|A8HYQ9_CHLRE U2 snRNP auxiliary factor, small subunit ...   116   1e-24
tr|B8LNG3|B8LNG3_PICSI Putative uncharacterized protein OS=Picea...   115   2e-24
tr|B7FJE0|B7FJE0_MEDTR Putative uncharacterized protein (Fragmen...   108   2e-22
tr|B7EHH7|B7EHH7_ORYSJ cDNA clone:001-039-A01, full insert seque...   108   4e-22
tr|B8AWR4|B8AWR4_ORYSI Putative uncharacterized protein OS=Oryza...   107   8e-22
tr|B4FQ72|B4FQ72_MAIZE Putative uncharacterized protein OS=Zea m...   104   5e-21
tr|A4S893|A4S893_OSTLU Predicted protein OS=Ostreococcus lucimar...   102   2e-20
tr|A5K4K6|A5K4K6_PLAVI U2 snRNP auxiliary factor, small subunit,...   100   6e-20
tr|Q00UC9|Q00UC9_OSTTA U2 snRNP auxiliary factor, small subunit ...    97   1e-18

>tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 312

 Score =  154 bits (388), Expect = 6e-36
 Identities = 86/175 (49%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKK SRE+R+RLFG +
Sbjct: 129 LQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRRLFGRY 188

Query: 232 XXXXXXXXXXXXXXXXXXXXE--KYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXX 405
                               +   + D                DR+G             
Sbjct: 189 RRYSHSRSRSRSASPHKDHEKHRHHDDRPRHGGRGYDRRYDVDDRDGHRGRRTRSRSPGG 248

Query: 406 XXXXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNREREELXRGTASRQEQ*SG 570
                   +SP   RRNRSP+REGSAERRAKIEQWNRE+E     T +     +G
Sbjct: 249 HRRGRSRSHSP---RRNRSPIREGSAERRAKIEQWNREKEAQASSTIANHPMQNG 300


>tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021681001
           PE=4 SV=1
          Length = 317

 Score =  152 bits (384), Expect = 2e-35
 Identities = 83/159 (52%), Positives = 92/159 (57%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKK SR++R++LFG +
Sbjct: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRQLRRQLFGRN 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                 +   +             P R G               
Sbjct: 189 RRRRSRSRSRTSTWSSWSSWSTWSTWSTWSTGGRRPRSRSPARRG--------------- 233

Query: 412 XXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNREREE 528
                  SP GGRRN+SPVREGSAERRAKIEQWNRERE+
Sbjct: 234 ---GRSRSP-GGRRNKSPVREGSAERRAKIEQWNREREQ 268


>tr|Q99L29|Q99L29_MOUSE cDNA sequence BC003883 OS=Mus musculus
           GN=BC003883 PE=2 SV=1
          Length = 310

 Score =  142 bits (358), Expect = 2e-32
 Identities = 79/163 (48%), Positives = 92/163 (56%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKK SRE+R++LFG +
Sbjct: 129 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGRY 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                               + ++ +               DRN                
Sbjct: 189 --------RRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYHDKGRRPRSRSPG 240

Query: 412 XXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNREREELXRG 540
                 + P  GRR+RSPVRE S ERRAKI QWNRE+E+   G
Sbjct: 241 HRGRSRSPP--GRRDRSPVRENSEERRAKIAQWNREKEQADTG 281


>tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_25638 PE=4 SV=1
          Length = 283

 Score =  142 bits (358), Expect = 2e-32
 Identities = 82/163 (50%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L+GRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGYCNFMHLKK SRE+R++LFGN+
Sbjct: 132 LSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFGNY 191

Query: 232 ---XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXX 402
                                   +Y D +               R G            
Sbjct: 192 RRRSRSRSHSPYGRGEARGPPSPRRYGDRDF-----------YDSRRGGGRGGGGRGRGY 240

Query: 403 XXXXXXXXGNSPHGGRRNRSP-VREGSAERRAKIEQWNREREE 528
                     +P   RR RSP  REGSAERRAKI+QWNREREE
Sbjct: 241 GRRRDRSRSRTP--TRRGRSPAAREGSAERRAKIDQWNREREE 281


>tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_194373 PE=4 SV=1
          Length = 304

 Score =  141 bits (356), Expect = 3e-32
 Identities = 82/162 (50%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L+GRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGYCNFMHLKK SRE+R++LFGN+
Sbjct: 132 LSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISRELRRKLFGNY 191

Query: 232 ---XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXX 402
                                   +Y D +               R G            
Sbjct: 192 RRRSRSRSHSPYGRGEARGPPSPRRYGDRDF-----------YDSRRGGGRGGGGRGRSY 240

Query: 403 XXXXXXXXGNSPHGGRRNRSP-VREGSAERRAKIEQWNRERE 525
                     +P   RR RSP  REGSAERRAKIEQWNRERE
Sbjct: 241 GRRRDRSRSRTP--PRRGRSPGAREGSAERRAKIEQWNRERE 280


>tr|Q9FMY5|Q9FMY5_ARATH U2 snRNP auxiliary factor, small subunit
           OS=Arabidopsis thaliana GN=At5g42820 PE=2 SV=1
          Length = 283

 Score =  134 bits (337), Expect = 5e-30
 Identities = 76/162 (46%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMH+K+ SRE+R++LFG +
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRY 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                ++                  DR+G               
Sbjct: 189 RRSYRRGSRSRSRSISPRRKREHSRER------ERGDVRDRDRHG---NGKRSSDRSERH 239

Query: 412 XXXXXGNSPHGG-RRNRSP--VREGSAERRAKIEQWNREREE 528
                G   HG  +R+RSP  VREGS ERRA+IEQWNRER+E
Sbjct: 240 DRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDE 281


>tr|B7E7L8|B7E7L8_ORYSJ cDNA clone:001-044-E06, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 290

 Score =  132 bits (333), Expect = 1e-29
 Identities = 70/158 (44%), Positives = 85/158 (53%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           LTGR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNFMH+K+  R++RKRLFG+ 
Sbjct: 129 LTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHL 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                +  D                  +                
Sbjct: 189 HRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRS 248

Query: 412 XXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNRERE 525
                G+      R RSPVR+GS ERRA+IEQWNRERE
Sbjct: 249 SYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNRERE 286


>tr|A2Z2M2|A2Z2M2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31864 PE=4 SV=1
          Length = 290

 Score =  132 bits (333), Expect = 1e-29
 Identities = 70/158 (44%), Positives = 85/158 (53%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           LTGR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNFMH+K+  R++RKRLFG+ 
Sbjct: 129 LTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHL 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                +  D                  +                
Sbjct: 189 HRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRS 248

Query: 412 XXXXXGNSPHGGRRNRSPVREGSAERRAKIEQWNRERE 525
                G+      R RSPVR+GS ERRA+IEQWNRERE
Sbjct: 249 SYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNRERE 286


>tr|A7QPI3|A7QPI3_VITVI Chromosome chr18 scaffold_137, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002951001
           PE=4 SV=1
          Length = 272

 Score =  132 bits (332), Expect = 2e-29
 Identities = 74/160 (46%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K   R++R++LFG +
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                +Y+ ++               R+G               
Sbjct: 189 ------SGYGRSRSRSRSLSPRYRRDS------------DRRRSGDRGDYRGNGRRSGDK 230

Query: 412 XXXXXGNSPHGG-RRNRSPVREGSAERRAKIEQWNREREE 528
                G   HG  RR+RSPVREGS ERRA+IE WNREREE
Sbjct: 231 HGSDGGRRRHGSPRRSRSPVREGSEERRARIELWNREREE 270


>tr|Q9S709|Q9S709_ARATH T22C5.10 (At1g27650/T22C5_2) (Putative U2
           snRNP auxiliary factor protein) (T17H3.14 protein)
           OS=Arabidopsis thaliana GN=T17H3.14 PE=2 SV=1
          Length = 296

 Score =  131 bits (329), Expect = 4e-29
 Identities = 78/173 (45%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
 Frame = +1

Query: 52  LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKTSREMRKRLFGNH 231
           L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K  SRE+R++LFG +
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 232 XXXXXXXXXXXXXXXXXXXXEKYQDNNLXXXXXXXXXXXXPDRNGVXXXXXXXXXXXXXX 411
                                K +DN+              DR                 
Sbjct: 189 RRSYRRGSRSRSRSRSISPRNK-RDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSER 247

Query: 412 XXXXXGNSPHGGRRNRSPV--------REGSAERRAKIEQWNREREELXRGTA 546
                      GRR  SP         REGS ERRA+IEQWNREREE   G A
Sbjct: 248 QERDGSR----GRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA 296