DK948013 |
Clone id |
TST38A01NGRL0002_C22 |
Library |
TST38 |
Length |
680 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_C22. 5' end sequence. |
Accession |
DK948013 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CAAATGGTCCGCCTTGCGGAGATGCTGAAGTGGTGGCGACGTAAAGCGCTGAAGAAGGCG CACAGCTTCTCCGATGTCCGAAGCGCCAGACGTGCAGGCCGCGCTCACACCACACGCTCT TTGTCCATGCCCTCAAAGGGAGGTGGCGTTCCCGCGGGCCACCTTGCCGTCTATGTTGGC GAGGACAGACAACGCTTTGTGATCAAAACGTCCTACTTGAGCCACCCCTTGTTTAGAGCC CTTCTTAAGAAAACTGAAGAAGAGATGGGCTTCCACCACGAGGGAGCCCTTGCCATCCCT TGCCAAGTCCCCTTCTTCGAGCACATCCTTCAATTCATACACTCCTCCAAATCTCATAGC AACCATTCCCACCACCACCACCCCCTCCCTCCTCAATTTCACGACCTTCTTCGAGAGCTT CTCCACTTGTCATCCTTAGACCCCACGCACCACCTCTCGTTCTCCACCTTCGATGATGCC TCCCTTTCCCTATGTAACCTTACAAGATCTCTCTCCTCCCTTGATGTTTCCAATGCAAAT GGAATGTCACAAGTTGTGCTAGTCTAGCTCGTCTTCAACAACCTCACACCACACATTCAC ATATTTGGAAGATAAGTGTCCAAATAACAAAGACAGGTTGTTTCCCGGCGTCCACATGCG AACACTCTCGCTCGCTCGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33083 |
Definition |
sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max |
Align length |
70 |
Score (bit) |
74.3 |
E-value |
5.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5C242 |
Definition |
tr|A5C242|A5C242_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
118 |
Score (bit) |
90.1 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948013|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_C22, 5' (680 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5C242|A5C242_VITVI Putative uncharacterized protein OS=Vitis... 90 1e-16 tr|Q7XPF1|Q7XPF1_ORYSJ Os04g0608300 protein OS=Oryza sativa subs... 88 4e-16 tr|Q6YXW3|Q6YXW3_ORYSJ Auxin-induced protein-like OS=Oryza sativ... 88 4e-16 tr|Q01JE1|Q01JE1_ORYSA B0402A04.1 protein OS=Oryza sativa GN=B04... 88 4e-16 tr|A3A326|A3A326_ORYSJ Putative uncharacterized protein OS=Oryza... 88 4e-16 tr|A2XXB4|A2XXB4_ORYSI Putative uncharacterized protein OS=Oryza... 88 4e-16 tr|A9TT06|A9TT06_PHYPA Predicted protein (Fragment) OS=Physcomit... 88 6e-16 tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis... 87 1e-15 tr|A9RR63|A9RR63_PHYPA Predicted protein (Fragment) OS=Physcomit... 87 1e-15 tr|A2Z1M0|A2Z1M0_ORYSI Putative uncharacterized protein OS=Oryza... 87 1e-15 tr|Q69LJ9|Q69LJ9_ORYSJ Os09g0437400 protein OS=Oryza sativa subs... 86 2e-15 tr|B6T8W0|B6T8W0_MAIZE SAUR20-auxin-responsive SAUR family membe... 86 2e-15 tr|A7PDR4|A7PDR4_VITVI Chromosome chr11 scaffold_13, whole genom... 86 2e-15 tr|B6TR66|B6TR66_MAIZE SAUR20-auxin-responsive SAUR family membe... 86 3e-15 tr|A5ASD7|A5ASD7_VITVI Putative uncharacterized protein OS=Vitis... 85 4e-15 tr|A2X0T7|A2X0T7_ORYSI Putative uncharacterized protein OS=Oryza... 85 4e-15 tr|Q0E405|Q0E405_ORYSJ Os02g0143400 protein OS=Oryza sativa subs... 84 6e-15 tr|B8LN65|B8LN65_PICSI Putative uncharacterized protein OS=Picea... 84 6e-15 tr|A7QV31|A7QV31_VITVI Chromosome undetermined scaffold_184, who... 84 8e-15 tr|A7NSY1|A7NSY1_VITVI Chromosome chr18 scaffold_1, whole genome... 84 8e-15 tr|A5BVS9|A5BVS9_VITVI Putative uncharacterized protein OS=Vitis... 84 8e-15 tr|Q8H6T6|Q8H6T6_PHAVU Auxin-regulated protein OS=Phaseolus vulg... 84 1e-14 tr|Q8GWV6|Q8GWV6_ARATH Putative uncharacterized protein At5g2081... 84 1e-14 tr|Q2V359|Q2V359_ARATH Uncharacterized protein At5g20810.2 OS=Ar... 84 1e-14 tr|Q9M249|Q9M249_ARATH Putative uncharacterized protein F7M19_13... 83 1e-14 tr|Q8LE18|Q8LE18_ARATH Putative uncharacterized protein OS=Arabi... 83 1e-14 tr|A0MF00|A0MF00_ARATH Putative uncharacterized protein (Fragmen... 83 1e-14 tr|Q9M712|Q9M712_MAIZE Putative uncharacterized protein saur1 OS... 83 2e-14 tr|A9S8Y6|A9S8Y6_PHYPA Predicted protein (Fragment) OS=Physcomit... 82 2e-14 tr|A9REB9|A9REB9_PHYPA Predicted protein (Fragment) OS=Physcomit... 82 2e-14
>tr|A5C242|A5C242_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033102 PE=4 SV=1 Length = 162
Score = 90.1 bits (222), Expect = 1e-16 Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 5/118 (4%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKA--LKKAHSFSDVRSARRAGRAH---TTRSLSMPSKGGGVPAGHL 165 ++VRL ++LK WR+ A K + + S ++++ R+LS+ K VP G+L Sbjct: 11 EIVRLQQILKKWRKLANTSKSSGNSSSIKNSNNNNSNKGKLLRRTLSLSEKSDVVPKGYL 70
Query: 166 AVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQFI 339 AV VGE+ +RFVI T YLSH F LL++ EEE GF G L IPC+V FE+IL+ + Sbjct: 71 AVCVGEELKRFVIPTKYLSHQAFNILLREAEEEFGFQQAGVLRIPCEVSAFENILKVV 128
>tr|Q7XPF1|Q7XPF1_ORYSJ Os04g0608300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0060N03.10 PE=2 SV=2 Length = 176
Score = 88.2 bits (217), Expect = 4e-16 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKALKK---AHSFSDVRSARRAGRAHTTRSLSMPSKG---GGVPA-- 156 ++VRL +MLK WR+ ++ A + + + R+LS G GG P Sbjct: 22 EIVRLQQMLKKWRKLSVAPKDAAATAGNGGGGESKAKKFLKRTLSFTDGGASPGGTPPPR 81
Query: 157 GHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQF 336 GHLAV VG QRFVI T YL H F ALL++ EEE GF EG L IPC+VP FE IL+ Sbjct: 82 GHLAVCVGPTAQRFVIPTDYLKHRAFAALLREAEEEFGFQQEGVLRIPCEVPAFEAILKA 141
Query: 337 I 339 + Sbjct: 142 V 142
>tr|Q6YXW3|Q6YXW3_ORYSJ Auxin-induced protein-like OS=Oryza sativa subsp. japonica GN=OSJNBa0064G16.6 PE=4 SV=1 Length = 154
Score = 88.2 bits (217), Expect = 4e-16 Identities = 51/112 (45%), Positives = 63/112 (56%) Frame = +1
Query: 4 MVRLAEMLKWWRRKALKKAHSFSDVRSARRAGRAHTTRSLSMPSKGGGVPAGHLAVYVGE 183 +VRL ++LK W+R AL A +AG+ + G VP G AV VGE Sbjct: 16 IVRLHQLLKRWKRAAL-----------APKAGKNNN-------GGGASVPKGFFAVCVGE 57
Query: 184 DRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQFI 339 + +RFVI T YL H F LL+K EEE GF HEGAL IPC V FE IL+ + Sbjct: 58 EMRRFVIPTEYLGHWAFEQLLRKAEEEFGFQHEGALRIPCDVEVFEGILRLV 109
>tr|Q01JE1|Q01JE1_ORYSA B0402A04.1 protein OS=Oryza sativa GN=B0402A04.1 PE=4 SV=1 Length = 176
Score = 88.2 bits (217), Expect = 4e-16 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKALKK---AHSFSDVRSARRAGRAHTTRSLSMPSKG---GGVPA-- 156 ++VRL +MLK WR+ ++ A + + + R+LS G GG P Sbjct: 22 EIVRLQQMLKKWRKLSVAPKDAAATAGNGGGGESKAKKFLKRTLSFTDGGASPGGTPPPR 81
Query: 157 GHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQF 336 GHLAV VG QRFVI T YL H F ALL++ EEE GF EG L IPC+VP FE IL+ Sbjct: 82 GHLAVCVGPTAQRFVIPTDYLKHRAFAALLREAEEEFGFQQEGVLRIPCEVPAFEAILKA 141
Query: 337 I 339 + Sbjct: 142 V 142
>tr|A3A326|A3A326_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005198 PE=4 SV=1 Length = 130
Score = 88.2 bits (217), Expect = 4e-16 Identities = 51/112 (45%), Positives = 63/112 (56%) Frame = +1
Query: 4 MVRLAEMLKWWRRKALKKAHSFSDVRSARRAGRAHTTRSLSMPSKGGGVPAGHLAVYVGE 183 +VRL ++LK W+R AL A +AG+ + G VP G AV VGE Sbjct: 16 IVRLHQLLKRWKRAAL-----------APKAGKNNN-------GGGASVPKGFFAVCVGE 57
Query: 184 DRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQFI 339 + +RFVI T YL H F LL+K EEE GF HEGAL IPC V FE IL+ + Sbjct: 58 EMRRFVIPTEYLGHWAFEQLLRKAEEEFGFQHEGALRIPCDVEVFEGILRLV 109
>tr|A2XXB4|A2XXB4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17317 PE=4 SV=1 Length = 176
Score = 88.2 bits (217), Expect = 4e-16 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKALKK---AHSFSDVRSARRAGRAHTTRSLSMPSKG---GGVPA-- 156 ++VRL +MLK WR+ ++ A + + + R+LS G GG P Sbjct: 22 EIVRLQQMLKKWRKLSVAPKDAAATAGNGGGGESKAKKFLKRTLSFTDGGASPGGTPPPR 81
Query: 157 GHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQF 336 GHLAV VG QRFVI T YL H F ALL++ EEE GF EG L IPC+VP FE IL+ Sbjct: 82 GHLAVCVGPTAQRFVIPTDYLKHRAFAALLREAEEEFGFQQEGVLRIPCEVPAFEAILKA 141
Query: 337 I 339 + Sbjct: 142 V 142
>tr|A9TT06|A9TT06_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_8913 PE=4 SV=1 Length = 69
Score = 87.8 bits (216), Expect = 6e-16 Identities = 39/64 (60%), Positives = 48/64 (75%) Frame = +1
Query: 148 VPAGHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHI 327 VP G L VYVGE+R+RFVIK YLSHP+F+ALL K+ EE G+ H+G L I C+ FFEH+ Sbjct: 1 VPEGFLVVYVGEERRRFVIKAKYLSHPVFKALLNKSAEEYGYEHKGGLEIACETVFFEHL 60
Query: 328 LQFI 339 L I Sbjct: 61 LDLI 64
>tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011169 PE=4 SV=1 Length = 170
Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKALKKAHSFS-DVRSARRAGRAHTTRSLSMPSKGGGVPAGHLAVYV 177 Q+VRL +++K W+ ++K H S D T R S P P+G LAVYV Sbjct: 9 QIVRLKQVMKKWKAMSMKLRHGPSPDATDTDTDSEIDTDRGASTPR----TPSGFLAVYV 64
Query: 178 GEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHILQFI 339 +R+RF++ T Y++ P+F LLK+ EEE GF G + +PC+V FF +L+F+ Sbjct: 65 ASERERFLVPTRYVNLPVFVTLLKRAEEEHGFKFSGGIVVPCEVGFFRKVLEFL 118
>tr|A9RR63|A9RR63_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_26859 PE=4 SV=1 Length = 70
Score = 86.7 bits (213), Expect = 1e-15 Identities = 38/64 (59%), Positives = 48/64 (75%) Frame = +1
Query: 148 VPAGHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGFHHEGALAIPCQVPFFEHI 327 VP G+L VYVG +R+RFVIK YLSHP+F+ALL K+ EE G+ H+G L I C+ FFEH+ Sbjct: 3 VPEGYLVVYVGVERRRFVIKAKYLSHPVFKALLNKSAEEFGYEHKGGLEIACETVFFEHL 62
Query: 328 LQFI 339 L I Sbjct: 63 LHLI 66
>tr|A2Z1M0|A2Z1M0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31504 PE=4 SV=1 Length = 188
Score = 86.7 bits (213), Expect = 1e-15 Identities = 55/142 (38%), Positives = 72/142 (50%), Gaps = 29/142 (20%) Frame = +1
Query: 1 QMVRLAEMLKWWRRKALKKAHSFSDVRSA-------------------------RRAGRA 105 Q+ RL E+L+ W+ AL + DV +A RR R Sbjct: 22 QITRLRELLQKWQAMAL--GANKGDVATAGDEEDEEVVEVAPAAAAAAIPPFVMRRLQRT 79
Query: 106 HTT----RSLSMPSKGGGVPAGHLAVYVGEDRQRFVIKTSYLSHPLFRALLKKTEEEMGF 273 T S P VP G+ VYVG +++RFVI T YL HP+FR LL+K EEE GF Sbjct: 80 VTVDSDDESCQSPEPPADVPRGYCPVYVGPEQRRFVIPTRYLGHPVFRLLLEKAEEEFGF 139
Query: 274 HHEGALAIPCQVPFFEHILQFI 339 H+GALAIPC+ F++ILQ + Sbjct: 140 CHQGALAIPCETEAFKYILQCV 161
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