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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948004
Clone id TST38A01NGRL0002_C12
Library
Length 700
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_C12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GGAATTGGGTATTCCTCCCACGGTTTCATCAACGCCAGCTCACATGCTACACGCGTCAAT
CCCTTCCTTCATCAGGCTTCATCATCGATGGATTAATCCCTTAATCTTTCCTTGATTAAT
TACCTGCACTCAACGCCTTGCCATTCATCAAAGGAGCTGCTTTATTATGGACGGCAAATC
CGCTCCAGGAGGCGGATTACTGAAGAAAATTAGCAGCACTAATTACCTGCGGAGTCACTG
CTGCCTCCGGCCGGCTGCTGTTTTAATTACCTGCTTCGCCATCCTCCTCTCTTTCCTGCT
TGTCACTGCGAGCTGTCTTTATATCGCCTCTCCTGACAAGCTTAACTTGCTTCTGTGGCA
TGTGCGAAACCTCAAGGTCGATGACACACATAAGGTATGGCCGAGCTCACAATTTTGGCA
AAATCTTACAATGGACCGTGGCCGCCAAATGCACAACAACTGTGCCTATTCGGGATGCCC
TCCTGCCTCAGATCCTCAGAATGTTGCACCATCACCGTTCAAGCAACCCTTTGATCGCAA
CCGCGAATGCCCTTTCTACTTCCACTACATCCATGAGGACCTCTCGCCATGGACTCAGGC
ACAAACAAGCAACAACCAGAGCGTCAGCGTTTCCAAGGAGATGCTAAACAAGGCTTCCCC
GCTCGCCAATTTCCGTGTGGTGATCAAGAAAGGGCGGCTC
■■Homology search results ■■ -
sp_hit_id Q14BK3
Definition sp|Q14BK3|CA049_MOUSE Uncharacterized protein C1orf49 homolog OS=Mus musculus
Align length 72
Score (bit) 34.7
E-value 0.51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948004|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_C12, 5'
         (700 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q14BK3|CA049_MOUSE Uncharacterized protein C1orf49 homolog OS...    35   0.51 
sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein...    32   3.3  
sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein...    32   3.3  
sp|P27197|AURB_CHLAA Auracyanin-B OS=Chloroflexus aurantiacus (s...    31   5.6  
sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza...    31   7.4  

>sp|Q14BK3|CA049_MOUSE Uncharacterized protein C1orf49 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 207

 Score = 34.7 bits (78), Expect = 0.51
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +2

Query: 335 DKLNLLLWHVRNLKVDDTHKVWPSSQFWQNLTMDRGRQMHNNCAYSGCPPASDPQNVAPS 514
           +K+++L+ + +N K+   ++     +FWQ   MD+  Q        G P A D   V P 
Sbjct: 98  EKMDVLINNQKNNKLPFQNQAKEQQKFWQLGKMDKSSQAMITEEPDGVPLACDKNVVPPK 157

Query: 515 PFKQPFDRNREC 550
           P + P +    C
Sbjct: 158 PTRNPLESLHPC 169


>sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein 1
           OS=Pongo abelii GN=ZFYVE1 PE=2 SV=1
          Length = 789

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = -3

Query: 599 PESMARGPHGCSGSRKGIRGCDQRVA*TVMVQHSEDLRQEGIPNRHSCCAFGGHGPL*DF 420
           P  M +  + CSG+ + I  CD+  +   +    E  RQE + N        GH P  D 
Sbjct: 14  PGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHERIRLKPGHVPYCDL 73

Query: 419 AKIVSSAIPYVCHR 378
            K +S  +P V  R
Sbjct: 74  CKGLSGHLPGVRQR 87


>sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1
           OS=Homo sapiens GN=ZFYVE1 PE=1 SV=1
          Length = 777

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = -3

Query: 599 PESMARGPHGCSGSRKGIRGCDQRVA*TVMVQHSEDLRQEGIPNRHSCCAFGGHGPL*DF 420
           P  M +  + CSG+ + I  CD+  +   +    E  RQE + N        GH P  D 
Sbjct: 14  PGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHERIRLKPGHVPYCDL 73

Query: 419 AKIVSSAIPYVCHR 378
            K +S  +P V  R
Sbjct: 74  CKGLSGHLPGVRQR 87


>sp|P27197|AURB_CHLAA Auracyanin-B OS=Chloroflexus aurantiacus
           (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_1950
           PE=1 SV=2
          Length = 235

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 570 M*WK*KGHSRLRSKGCLNGDGATF*GSEAGGHP 472
           M W+  G S  RS+   NG G+TF G  AGG P
Sbjct: 1   MSWRGSGRSNFRSRSSSNG-GSTFSGGSAGGPP 32


>sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza
           sativa subsp. japonica GN=HAK11 PE=2 SV=3
          Length = 791

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = +2

Query: 191 GGLLKKISSTNYLRSHCCLRPAAVLITCFAILLSFLLVTASCLYIASPDKLNLLLWHVRN 370
           GG++  I+ T  L +  C  P       FAI ++F L+   CL +A   +   ++ H ++
Sbjct: 294 GGIMLSITGTEALFADLCHFPV------FAIQIAFTLIVFPCLLLAYTGQAAYIIAH-KD 346

Query: 371 LKVDDTHKVWPSSQFW 418
              D  ++  P S +W
Sbjct: 347 HVADAFYRSIPDSIYW 362
tr_hit_id Q0WN81
Definition tr|Q0WN81|Q0WN81_ARATH Putative uncharacterized protein At2g45840 OS=Arabidopsis thaliana
Align length 106
Score (bit) 53.5
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948004|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_C12, 5'
         (700 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0WN81|Q0WN81_ARATH Putative uncharacterized protein At2g4584...    54   1e-05
tr|O80835|O80835_ARATH Putative uncharacterized protein At2g4584...    54   1e-05
tr|Q5Q0C1|Q5Q0C1_ARATH Putative uncharacterized protein (Putativ...    53   2e-05
tr|B3H4G0|B3H4G0_ARATH Uncharacterized protein At3g61280.2 OS=Ar...    53   2e-05
tr|B8AG00|B8AG00_ORYSI Putative uncharacterized protein OS=Oryza...    52   3e-05
tr|B4FL50|B4FL50_MAIZE Putative uncharacterized protein OS=Zea m...    50   1e-04
tr|Q9SH28|Q9SH28_ARATH F2K11.20 OS=Arabidopsis thaliana PE=4 SV=1      50   1e-04
tr|Q9SMT6|Q9SMT6_ARATH Putative uncharacterized protein T2J13.18...    49   2e-04
tr|A7QIT8|A7QIT8_VITVI Chromosome chr2 scaffold_105, whole genom...    48   5e-04
tr|A5C6C3|A5C6C3_VITVI Putative uncharacterized protein OS=Vitis...    48   5e-04
tr|O80836|O80836_ARATH Putative uncharacterized protein At2g4583...    48   7e-04
tr|A2Q541|A2Q541_MEDTR Putative uncharacterized protein OS=Medic...    48   7e-04
tr|Q9M2D7|Q9M2D7_ARATH Putative uncharacterized protein T20K12.1...    47   0.001
tr|Q0WS79|Q0WS79_ARATH Putative uncharacterized protein At2g4583...    47   0.001
tr|A5BVE9|A5BVE9_VITVI Putative uncharacterized protein OS=Vitis...    47   0.001
tr|B4G0G0|B4G0G0_MAIZE Putative uncharacterized protein OS=Zea m...    47   0.001
tr|B4FTA1|B4FTA1_MAIZE Putative uncharacterized protein OS=Zea m...    47   0.001
tr|Q0WT98|Q0WT98_ARATH Putative uncharacterized protein At3g4898...    47   0.002
tr|B6U215|B6U215_MAIZE Lipopolysaccharide-modifying protein OS=Z...    47   0.002
tr|Q9M2D5|Q9M2D5_ARATH Putative uncharacterized protein T20K12.1...    46   0.002
tr|Q9LML4|Q9LML4_ARATH F10K1.7 protein OS=Arabidopsis thaliana G...    46   0.002
tr|Q56Y51|Q56Y51_ARATH Putative uncharacterized protein At1g0722...    46   0.002
tr|Q0JBG0|Q0JBG0_ORYSJ Os04g0534100 protein OS=Oryza sativa subs...    45   0.003
tr|Q01IH8|Q01IH8_ORYSA OSIGBa0159I10.7 protein OS=Oryza sativa G...    45   0.003
tr|B8ASF0|B8ASF0_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.003
tr|B6TEG9|B6TEG9_MAIZE Lipopolysaccharide-modifying protein OS=Z...    45   0.005
tr|Q5VMJ0|Q5VMJ0_ORYSJ Putative uncharacterized protein P0529C07...    44   0.008
tr|Q2HRE8|Q2HRE8_MEDTR Lipopolysaccharide-modifying protein OS=M...    44   0.008
tr|Q0DEH1|Q0DEH1_ORYSJ Os06g0152700 protein OS=Oryza sativa subs...    44   0.008
tr|A2Y9G7|A2Y9G7_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.008

>tr|Q0WN81|Q0WN81_ARATH Putative uncharacterized protein At2g45840
           OS=Arabidopsis thaliana GN=At2g45840 PE=2 SV=1
          Length = 523

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 50/106 (47%)
 Frame = +2

Query: 383 DTHKVWPSSQFWQNLTMDRGRQMHNNCAYSGCPPASDPQNVAPSPFKQPFDRNRECPFYF 562
           +T+   P  +    L       +  N A   CP AS+P+   PS      D    CP YF
Sbjct: 70  NTNATIPKEKLTTPLNFTLQCSLDQNIATQTCP-ASNPEKSQPSK-----DEPETCPDYF 123

Query: 563 HYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIKKGRL 700
            +IH+DL  W        +   +++E L +AS  A+FR++IK GR+
Sbjct: 124 RWIHKDLEAW--------RETGITRETLERASDKAHFRLIIKGGRV 161


>tr|O80835|O80835_ARATH Putative uncharacterized protein At2g45840
           OS=Arabidopsis thaliana GN=At2g45840 PE=2 SV=1
          Length = 413

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 50/106 (47%)
 Frame = +2

Query: 383 DTHKVWPSSQFWQNLTMDRGRQMHNNCAYSGCPPASDPQNVAPSPFKQPFDRNRECPFYF 562
           +T+   P  +    L       +  N A   CP AS+P+   PS      D    CP YF
Sbjct: 70  NTNATIPKEKLTTPLNFTLQCSLDQNIATQTCP-ASNPEKSQPSK-----DEPETCPDYF 123

Query: 563 HYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIKKGRL 700
            +IH+DL  W        +   +++E L +AS  A+FR++IK GR+
Sbjct: 124 RWIHKDLEAW--------RETGITRETLERASDKAHFRLIIKGGRV 161


>tr|Q5Q0C1|Q5Q0C1_ARATH Putative uncharacterized protein (Putative
           uncharacterized protein At3g61280) OS=Arabidopsis
           thaliana GN=At3g61280 PE=2 SV=1
          Length = 536

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 25/64 (39%), Positives = 35/64 (54%)
 Frame = +2

Query: 509 PSPFKQPFDRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIK 688
           P+ F+     +  CP YF +IH DL  W        Q   +++E L +A P A+FR+VIK
Sbjct: 118 PTKFEPAISSSETCPDYFKWIHRDLKVW--------QKTGITRETLERARPNAHFRIVIK 169

Query: 689 KGRL 700
            GRL
Sbjct: 170 SGRL 173


>tr|B3H4G0|B3H4G0_ARATH Uncharacterized protein At3g61280.2
           OS=Arabidopsis thaliana GN=At3g61280 PE=4 SV=1
          Length = 378

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 25/64 (39%), Positives = 35/64 (54%)
 Frame = +2

Query: 509 PSPFKQPFDRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIK 688
           P+ F+     +  CP YF +IH DL  W        Q   +++E L +A P A+FR+VIK
Sbjct: 118 PTKFEPAISSSETCPDYFKWIHRDLKVW--------QKTGITRETLERARPNAHFRIVIK 169

Query: 689 KGRL 700
            GRL
Sbjct: 170 SGRL 173


>tr|B8AG00|B8AG00_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08244 PE=4 SV=1
          Length = 524

 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 29/78 (37%), Positives = 38/78 (48%)
 Frame = +2

Query: 464 AYSGCPPASDPQNVAPSPFKQPFDRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEM 643
           A S  P  +      P P   P   N  CP YF +IHEDL PW  A         +++ M
Sbjct: 101 ALSSRPACARVPEAHPLP---PTTTNSSCPAYFRFIHEDLHPWRAAG-------GITRRM 150

Query: 644 LNKASPLANFRVVIKKGR 697
           L +A   ANFR+V+ +GR
Sbjct: 151 LERARDTANFRLVVLRGR 168


>tr|B4FL50|B4FL50_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 551

 Score = 50.4 bits (119), Expect = 1e-04
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +2

Query: 479 PPASDPQNVAPSPFKQPFDRNRE----CPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEML 646
           P AS     A  P   P   N      CP YF +IHEDL PW  A         +++ M+
Sbjct: 121 PNASSASTCAAFPDPPPLPANSNASSTCPAYFRFIHEDLHPWRAAG-------GITRAMV 173

Query: 647 NKASPLANFRVVIKKGR 697
           ++A   ANFR+V+ +GR
Sbjct: 174 DRARATANFRLVVIRGR 190


>tr|Q9SH28|Q9SH28_ARATH F2K11.20 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 605

 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = +2

Query: 533 DRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIKKGRL 700
           + NR CP YF +IHEDL PW        +   ++KEM+ +    A+FR+VI  G++
Sbjct: 165 ESNRSCPDYFKWIHEDLKPW--------RETGITKEMVERGKTTAHFRLVILNGKV 212


>tr|Q9SMT6|Q9SMT6_ARATH Putative uncharacterized protein T2J13.180
           OS=Arabidopsis thaliana GN=T2J13.180 PE=4 SV=1
          Length = 539

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
 Frame = +2

Query: 425 LTMDRGRQMHNNCA-YSG-----CPPASDPQNVAPSPFKQPFDRNRE--CPFYFHYIHED 580
           L  ++ ++   NCA +SG     CP  + P +   S  +   DR+    CP YF +IHED
Sbjct: 87  LITEKPKEFTLNCAAFSGNDTGTCPKDNYPTSFRSSAGEGESDRSPSATCPDYFRWIHED 146

Query: 581 LSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIKKGRL 700
           L PW        +   +++E L +A+  A FR+ I  GR+
Sbjct: 147 LRPW--------EKTGITREALERANATAIFRLAIINGRI 178


>tr|A7QIT8|A7QIT8_VITVI Chromosome chr2 scaffold_105, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000391001
           PE=4 SV=1
          Length = 373

 Score = 48.1 bits (113), Expect = 5e-04
 Identities = 23/64 (35%), Positives = 36/64 (56%)
 Frame = +2

Query: 509 PSPFKQPFDRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIK 688
           P+ F         CP YF +IHEDL PW        ++  +S++M+ +A   A+FR+VI 
Sbjct: 57  PTTFDTDLAWKPVCPDYFRWIHEDLKPW--------KTTGISRDMVERAKRSAHFRLVIV 108

Query: 689 KGRL 700
           KG++
Sbjct: 109 KGKV 112


>tr|A5C6C3|A5C6C3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_020976 PE=4 SV=1
          Length = 439

 Score = 48.1 bits (113), Expect = 5e-04
 Identities = 23/64 (35%), Positives = 36/64 (56%)
 Frame = +2

Query: 509 PSPFKQPFDRNRECPFYFHYIHEDLSPWTQAQTSNNQSVSVSKEMLNKASPLANFRVVIK 688
           P+ F         CP YF +IHEDL PW        ++  +S++M+ +A   A+FR+VI 
Sbjct: 34  PTTFDTDLAWKPVCPDYFRWIHEDLKPW--------KTTGISRDMVERAKRSAHFRLVIV 85

Query: 689 KGRL 700
           KG++
Sbjct: 86  KGKV 89