DK947861
Clone id YMU02A01NGRM0001_H04
Library
Length 426
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_H04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ATGTTGGTGAGAAGTATGTTGAAGGTAGTCCGCCCTCAGGCATGGAGATGAAGAAATGGG
AAGCATAAGATTGTTTGGCTGTGCCAGTGAGCAAGTATCGACAGGGAAAGGCGCCACTGC
ATTTGCTTCAATGTGCAGTTTTGTTCACATGGTCTTGTAACGTGGAAATTGTAATCACTC
AAAGTTGAGTAAAGGGAACATCACACGTCTGGGTGTTGGTTTGTGATTACATTTGTGGTA
GGTTTAGTGTGTACTACTGCGTTTTCCCCGAGTGTGGTTATACCTTCATTCTGCTTTTGT
TGTCTGTATTGGGAGAGAACTATTTCTCAAGGCAAAAGAGATTTTAGACGCTGTATAGAA
ATAATATCCAAGTTGAATTATGGAGCATTTTGGAAGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
■■Homology search results ■■ -
sp_hit_id P30318
Definition sp|P30318|DPOL_NPVLD DNA polymerase OS=Lymantria dispar multicapsid nuclear polyhedrosis virus
Align length 28
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947861|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_H04, 5'
(393 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P30318|DPOL_NPVLD DNA polymerase OS=Lymantria dispar multicap... 30 3.8
sp|Q6FR40|YPT35_CANGA PX domain-containing protein YPT35 OS=Cand... 30 4.9
sp|Q9A217|SYL_CAUCR Leucyl-tRNA synthetase OS=Caulobacter cresce... 29 6.4
sp|Q8YQU9|SYR_ANASP Arginyl-tRNA synthetase OS=Anabaena sp. (str... 29 8.4
sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4... 29 8.4

>sp|P30318|DPOL_NPVLD DNA polymerase OS=Lymantria dispar multicapsid
nuclear polyhedrosis virus GN=POL PE=3 SV=2
Length = 1014

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2

Query: 215 HPDV*CSLYSTLSDYNFHVTRPCEQNCT 132
+ +V C LYS S Y H + C +NCT
Sbjct: 66 YAEVRCDLYSYKSCYGTHASATCHRNCT 93


>sp|Q6FR40|YPT35_CANGA PX domain-containing protein YPT35 OS=Candida
glabrata GN=YPT35 PE=3 SV=1
Length = 173

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2

Query: 260 AVVHTKPTTNVITNQHPDV*CSLYSTLSDYNFHVTRPCEQNCTL 129
AV+ +P T + T P + S S++++ NF++ R NCT+
Sbjct: 6 AVLDPEPITLLDTEDEPGISQSRRSSIANSNFYIERAFVTNCTI 49


>sp|Q9A217|SYL_CAUCR Leucyl-tRNA synthetase OS=Caulobacter
crescentus GN=leuS PE=3 SV=1
Length = 861

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1

Query: 138 LHIEANAVAPFPVDTCSLAQPNNLMLPISSSPCLRADYLQHTS 10
+H EA V P P D +A P+++ +P LR +HT+
Sbjct: 443 IHCEACGVVPVPEDQLPVALPDDVTFDKPGNPLLRHPTWRHTT 485


>sp|Q8YQU9|SYR_ANASP Arginyl-tRNA synthetase OS=Anabaena sp. (strain
PCC 7120) GN=argS PE=3 SV=1
Length = 588

Score = 28.9 bits (63), Expect = 8.4
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3

Query: 87 VSKYRQGKAPLHLLQCAVLFTWSCNVEIVITQS*VKGTSHVWVLVCDYICGRFSVYYCV- 263
VS YRQ K + F + E+V Q+ T H W L+C+ F V Y +
Sbjct: 197 VSFYRQAKQRFDADEA---FQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLL 253

Query: 264 ---FPECGYTFILLLLSVLGEN 320
E G +F LL + EN
Sbjct: 254 DVKLTERGESFYNPLLPTVVEN 275


>sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4
OS=Cryptococcus neoformans GN=CYP6 PE=3 SV=1
Length = 504

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3

Query: 88 TGTAKQSYASHFFISMPEGGLPSTYFSP 5
TGT +S AS+ + P G P YF+P
Sbjct: 59 TGTGGESLASYVYSQSPSGPRPPRYFTP 86


tr_hit_id A7QGA6
Definition tr|A7QGA6|A7QGA6_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera
Align length 20
Score (bit) 40.4
E-value 0.044
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947861|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_H04, 5'
(393 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QGA6|A7QGA6_VITVI Chromosome undetermined scaffold_91, whol... 40 0.044
tr|Q8W516|Q8W516_HORVU SGT1 OS=Hordeum vulgare GN=SGT1 PE=2 SV=1 40 0.076
tr|B2WUP4|B2WUP4_WHEAT SGT1 OS=Triticum aestivum PE=2 SV=1 40 0.076
tr|B2KKV5|B2KKV5_9POAL SGT1 OS=Thinopyrum intermedium PE=2 SV=1 40 0.076
tr|A3RDP4|A3RDP4_WHEAT SGT1-2 OS=Triticum aestivum GN=SGT1-2 PE=... 40 0.076
tr|A3RDP3|A3RDP3_WHEAT SGT1-1 OS=Triticum aestivum GN=SGT1-1 PE=... 40 0.076
tr|Q9SE32|Q9SE32_ORYSA Sgt1 OS=Oryza sativa GN=Sgt1 PE=2 SV=1 39 0.099
tr|Q0JL44|Q0JL44_ORYSJ Os01g0624500 protein OS=Oryza sativa subs... 39 0.099
tr|B8ABY6|B8ABY6_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.099
tr|B6EBD4|B6EBD4_SOYBN SGT1-1 OS=Glycine max PE=2 SV=1 39 0.099
tr|A6N0C5|A6N0C5_ORYSI Suppressor of g2 allele of skp1 (Fragment... 39 0.099
tr|A2ZVJ9|A2ZVJ9_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.099
tr|Q84UV7|Q84UV7_NICBE SGT1 OS=Nicotiana benthamiana PE=2 SV=1 39 0.13
tr|Q5EEY5|Q5EEY5_NICBE SGT1 OS=Nicotiana benthamiana PE=2 SV=1 39 0.13
tr|Q49HP4|Q49HP4_CAPAN Sgt1b OS=Capsicum annuum PE=2 SV=1 39 0.13
tr|Q2HPC2|Q2HPC2_SOLTU SGT1 OS=Solanum tuberosum PE=4 SV=1 39 0.13
tr|B7FIH5|B7FIH5_MEDTR Putative uncharacterized protein OS=Medic... 39 0.13
tr|B6TAZ5|B6TAZ5_MAIZE Suppressor of G2 allele of SKP1 OS=Zea ma... 39 0.13
tr|B6EBD5|B6EBD5_SOYBN SGT1-2 OS=Glycine max PE=2 SV=1 39 0.13
tr|B4FQV3|B4FQV3_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.13
tr|A9P933|A9P933_POPTR Putative uncharacterized protein OS=Popul... 39 0.13
tr|A5H2U4|A5H2U4_SOLLC SGT1-2 OS=Solanum lycopersicum PE=2 SV=1 39 0.13
tr|Q9SM53|Q9SM53_RUBID Putative uncharacterized protein (Fragmen... 37 0.38
tr|Q49TU9|Q49TU9_LILLO Pollen-specific SGT1 OS=Lilium longifloru... 37 0.38
tr|Q9SUT5|Q9SUT5_ARATH Putative uncharacterized protein AT4g1126... 35 1.4
tr|Q704T2|Q704T2_BRAOL SGT1-like protein OS=Brassica oleracea GN... 35 1.4
tr|Q704T1|Q704T1_BRAOL SGT1-like protein OS=Brassica oleracea GN... 35 1.4
tr|Q9SUR9|Q9SUR9_ARATH Phosphatase like protein OS=Arabidopsis t... 35 1.9
tr|Q8W515|Q8W515_ARATH SGT1a OS=Arabidopsis thaliana GN=SGT1a PE... 35 1.9
tr|Q84LL4|Q84LL4_ARATH SGT1-like protein (Fragment) OS=Arabidops... 35 1.9

>tr|A7QGA6|A7QGA6_VITVI Chromosome undetermined scaffold_91, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00037765001 PE=4 SV=1
Length = 361

Score = 40.4 bits (93), Expect = 0.044
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG K VEGSPP GMEMKKWE
Sbjct: 341 VGSKKVEGSPPDGMEMKKWE 360


>tr|Q8W516|Q8W516_HORVU SGT1 OS=Hordeum vulgare GN=SGT1 PE=2 SV=1
Length = 373

Score = 39.7 bits (91), Expect = 0.076
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG+K VEGSPP GME+KKWE
Sbjct: 353 VGKKTVEGSPPDGMELKKWE 372


>tr|B2WUP4|B2WUP4_WHEAT SGT1 OS=Triticum aestivum PE=2 SV=1
Length = 377

Score = 39.7 bits (91), Expect = 0.076
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG+K VEGSPP GME+KKWE
Sbjct: 357 VGKKTVEGSPPDGMELKKWE 376


>tr|B2KKV5|B2KKV5_9POAL SGT1 OS=Thinopyrum intermedium PE=2 SV=1
Length = 372

Score = 39.7 bits (91), Expect = 0.076
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG+K VEGSPP GME+KKWE
Sbjct: 352 VGKKTVEGSPPDGMELKKWE 371


>tr|A3RDP4|A3RDP4_WHEAT SGT1-2 OS=Triticum aestivum GN=SGT1-2 PE=2
SV=1
Length = 377

Score = 39.7 bits (91), Expect = 0.076
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG+K VEGSPP GME+KKWE
Sbjct: 357 VGKKTVEGSPPDGMELKKWE 376


>tr|A3RDP3|A3RDP3_WHEAT SGT1-1 OS=Triticum aestivum GN=SGT1-1 PE=2
SV=1
Length = 377

Score = 39.7 bits (91), Expect = 0.076
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG+K VEGSPP GME+KKWE
Sbjct: 357 VGKKTVEGSPPDGMELKKWE 376


>tr|Q9SE32|Q9SE32_ORYSA Sgt1 OS=Oryza sativa GN=Sgt1 PE=2 SV=1
Length = 367

Score = 39.3 bits (90), Expect = 0.099
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG K VEGSPP GME+KKWE
Sbjct: 347 VGSKKVEGSPPDGMELKKWE 366


>tr|Q0JL44|Q0JL44_ORYSJ Os01g0624500 protein OS=Oryza sativa subsp.
japonica GN=Os01g0624500 PE=4 SV=1
Length = 367

Score = 39.3 bits (90), Expect = 0.099
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG K VEGSPP GME+KKWE
Sbjct: 347 VGSKKVEGSPPDGMELKKWE 366


>tr|B8ABY6|B8ABY6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02921 PE=4 SV=1
Length = 367

Score = 39.3 bits (90), Expect = 0.099
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG K VEGSPP GME+KKWE
Sbjct: 347 VGSKKVEGSPPDGMELKKWE 366


>tr|B6EBD4|B6EBD4_SOYBN SGT1-1 OS=Glycine max PE=2 SV=1
Length = 360

Score = 39.3 bits (90), Expect = 0.099
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3

Query: 3 VGEKYVEGSPPSGMEMKKWE 62
VG K VEGSPP GME+KKWE
Sbjct: 340 VGSKKVEGSPPEGMELKKWE 359