DK947792 |
Clone id |
YMU02A01NGRM0001_A07 |
Library |
YMU02 |
Length |
490 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_A07. 5' end sequence. |
Accession |
DK947792 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GAGAGAAAGTGATAGAGATGGTGCTGGGCAGACAGAAGCCCAACGTGTTGGTTACGGGGA CGCCAGGCACGGGCAAGACCTCCACTGCATCGCTGCTTGCAGAGGCCGCCCATCTTCGCC ACATCAATGTGGGCGAGCTGGTGAAGGAGAAGCACCTGCACGACGGCTGGGATCCCGATC TCCTCTGCCATATCCTTAACGAAGACCTGCTTTGTGACGAGCTTGAAGAACGTATGAAAA GTGGTGGGAATATAGTAGATTATCATGGTTGCGAGTTTTTCCCAGAGAGATGGTTCGATC TGGTGGTAGTGCTTCAAACCGACAATTCTATATTGTATGATAGGCTCATGAATAGGTACA GTTTTATATGACCGGTAGTTCTCCACCACGGTTTACTATTGGCTCGTCCTCTCTCTTTAA AGATAAAATAAAATTTTTCTTATCATTGTCATAGGCTGATCACAAAAAAAAAAAAAAAAA AAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54Y03 |
Definition |
sp|Q54Y03|KAD6_DICDI Probable adenylate kinase isoenzyme 6 OS=Dictyostelium discoideum |
Align length |
113 |
Score (bit) |
133.0 |
E-value |
4.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NZE8 |
Definition |
tr|A7NZE8|A7NZE8_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
109 |
Score (bit) |
160.0 |
E-value |
3.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947792|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRM0001_A07, 5' (463 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NZE8|A7NZE8_VITVI Chromosome chr6 scaffold_3, whole genome ... 160 3e-38 tr|A5AJU0|A5AJU0_VITVI Putative uncharacterized protein OS=Vitis... 160 3e-38 tr|B8B5F5|B8B5F5_ORYSI Putative uncharacterized protein OS=Oryza... 159 5e-38 tr|A9PD48|A9PD48_POPTR Putative uncharacterized protein OS=Popul... 159 5e-38 tr|A9PB41|A9PB41_POPTR Putative uncharacterized protein OS=Popul... 159 5e-38 tr|Q7EYP9|Q7EYP9_ORYSJ Os07g0412400 protein OS=Oryza sativa subs... 159 8e-38 tr|Q6L3H6|Q6L3H6_SOLDE Adenylate kinase isoenzyme 6 , putative O... 157 2e-37 tr|B7FFB1|B7FFB1_MEDTR Putative uncharacterized protein OS=Medic... 152 1e-35 tr|A3BIX2|A3BIX2_ORYSJ Putative uncharacterized protein OS=Oryza... 148 1e-34 tr|A9S6I6|A9S6I6_PHYPA Predicted protein OS=Physcomitrella paten... 148 1e-34 tr|Q9FJI1|Q9FJI1_ARATH Arabidopsis thaliana genomic DNA, chromos... 146 4e-34 tr|A8I7Y8|A8I7Y8_CHLRE Predicted protein OS=Chlamydomonas reinha... 130 4e-29 tr|B3RRM0|B3RRM0_TRIAD Putative uncharacterized protein OS=Trich... 125 8e-28 tr|B6P9E2|B6P9E2_BRAFL Putative uncharacterized protein OS=Branc... 124 2e-27 tr|A6XB81|A6XB81_RAT Adenylate kinase 6 OS=Rattus norvegicus GN=... 119 7e-26 tr|Q5DAB1|Q5DAB1_SCHJA SJCHGC06169 protein OS=Schistosoma japoni... 119 1e-25 tr|Q4QQY8|Q4QQY8_XENLA MGC115514 protein OS=Xenopus laevis GN=ta... 118 1e-25 tr|Q5F2S9|Q5F2S9_HUMAN Coilin-interacting nuclear ATPase protein... 117 2e-25 tr|Q4SDG2|Q4SDG2_TETNG Chromosome undetermined SCAF14638, whole ... 117 3e-25 tr|Q5DGM7|Q5DGM7_SCHJA Putative uncharacterized protein OS=Schis... 116 5e-25 tr|Q4PMA7|Q4PMA7_IXOSC TATA box binding protein (TBP)-associated... 116 5e-25 tr|Q5F4A8|Q5F4A8_CHICK Putative uncharacterized protein OS=Gallu... 116 6e-25 tr|A7SUU4|A7SUU4_NEMVE Predicted protein OS=Nematostella vectens... 115 8e-25 tr|Q28HQ4|Q28HQ4_XENTR OTTXETP00000007949 OS=Xenopus tropicalis ... 115 1e-24 tr|B8BYJ8|B8BYJ8_THAPS Putative uncharacterized protein OS=Thala... 115 1e-24 tr|Q6AZI6|Q6AZI6_XENLA MGC80885 protein OS=Xenopus laevis GN=MGC... 115 1e-24 tr|Q2GW62|Q2GW62_CHAGB Putative uncharacterized protein OS=Chaet... 115 1e-24 tr|A7E4I7|A7E4I7_SCLS1 Putative uncharacterized protein OS=Scler... 114 2e-24 tr|A6RZR1|A6RZR1_BOTFB Putative uncharacterized protein OS=Botry... 114 2e-24 tr|Q6IQD6|Q6IQD6_DANRE Zgc:86811 OS=Danio rerio GN=zgc:86811 PE=... 114 3e-24
>tr|A7NZE8|A7NZE8_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024485001 PE=4 SV=1 Length = 175
Score = 160 bits (405), Expect = 3e-38 Identities = 74/109 (67%), Positives = 84/109 (77%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R+KPN+LVTGTPGTGKT+T+ LAEA LRHIN+GELV+EK+LHDGWD CHI Sbjct: 6 RKKPNILVTGTPGTGKTTTSFSLAEATQLRHINIGELVREKNLHDGWDDQFDCHIINEDL 65
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GGNIVDYHGC+FFPERWFD VVVLQTDNS+LYDRL R Sbjct: 66 VCDELEDLMEEGGNIVDYHGCDFFPERWFDRVVVLQTDNSVLYDRLSTR 114
>tr|A5AJU0|A5AJU0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002854 PE=4 SV=1 Length = 175
Score = 160 bits (405), Expect = 3e-38 Identities = 74/109 (67%), Positives = 84/109 (77%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R+KPN+LVTGTPGTGKT+T+ LAEA LRHIN+GELV+EK+LHDGWD CHI Sbjct: 6 RKKPNILVTGTPGTGKTTTSFSLAEATQLRHINIGELVREKNLHDGWDDQFDCHIINEDL 65
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GGNIVDYHGC+FFPERWFD VVVLQTDNS+LYDRL R Sbjct: 66 VCDELEDLMEEGGNIVDYHGCDFFPERWFDRVVVLQTDNSVLYDRLSTR 114
>tr|B8B5F5|B8B5F5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25737 PE=4 SV=1 Length = 180
Score = 159 bits (403), Expect = 5e-38 Identities = 74/109 (67%), Positives = 86/109 (78%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R +PNVLVTGTPGTGKT+T SLLA+A LRHIN+G+LV+EK LHDGWD +L CHI Sbjct: 10 RTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINEDL 69
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GG +VDYHGC+FFPERWFDLVVVLQTDNSIL+DRL +R Sbjct: 70 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR 118
>tr|A9PD48|A9PD48_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 178
Score = 159 bits (403), Expect = 5e-38 Identities = 73/109 (66%), Positives = 84/109 (77%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R+KPN+L+TGTPGTGKT+TAS LAEA RHIN+G+LVKEK+LHDGWD C+I Sbjct: 9 RKKPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDL 68
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GGNIVDYHGC+FFPERWFD VVVLQTDNS+LYDRL R Sbjct: 69 VCDELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKR 117
>tr|A9PB41|A9PB41_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 178
Score = 159 bits (403), Expect = 5e-38 Identities = 73/109 (66%), Positives = 84/109 (77%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R+KPN+L+TGTPGTGKT+TAS LAEA RHIN+G+LVKEK+LHDGWD C+I Sbjct: 9 RKKPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDL 68
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GGNIVDYHGC+FFPERWFD VVVLQTDNS+LYDRL R Sbjct: 69 VCDELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKR 117
>tr|Q7EYP9|Q7EYP9_ORYSJ Os07g0412400 protein OS=Oryza sativa subsp. japonica GN=P0710F09.137 PE=2 SV=1 Length = 180
Score = 159 bits (401), Expect = 8e-38 Identities = 74/109 (67%), Positives = 86/109 (78%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R +PNVLVTGTPGTGKT+T SLLA+A LRHIN+G+LV+EK LHDGWD +L CHI Sbjct: 10 RTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINEDL 69
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M+ GG +VDYHGC+FFPERWFDLVVVLQTDNSIL+DRL +R Sbjct: 70 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR 118
>tr|Q6L3H6|Q6L3H6_SOLDE Adenylate kinase isoenzyme 6 , putative OS=Solanum demissum GN=SDM1_4t00017 PE=4 SV=1 Length = 177
Score = 157 bits (398), Expect = 2e-37 Identities = 72/109 (66%), Positives = 86/109 (78%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R++PN+L+TGTPGTGKT+T+S LAEA LRHIN+GELVKEK LHDGWD L C+I Sbjct: 8 RRRPNILITGTPGTGKTTTSSALAEATQLRHINIGELVKEKKLHDGWDDTLDCYIINEDL 67
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M++GGNIVD+HGC+FFPERWFD VVVLQTDN++LYDRL R Sbjct: 68 VCDELEDIMEAGGNIVDHHGCDFFPERWFDRVVVLQTDNTVLYDRLSRR 116
>tr|B7FFB1|B7FFB1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 177
Score = 152 bits (383), Expect = 1e-35 Identities = 71/109 (65%), Positives = 83/109 (76%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R+KPN+LVTGTPGTGKT+T++ AEA L HIN+G+LVKEK+LHDGWD +L +I Sbjct: 8 RRKPNILVTGTPGTGKTTTSTAPAEATQLNHINIGDLVKEKNLHDGWDDELDSYILNEDL 67
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 M GGNIVDYHGC+FFPERWFD VVVLQTDN+ILYDRL R Sbjct: 68 VCDELEDVMDEGGNIVDYHGCDFFPERWFDCVVVLQTDNTILYDRLSRR 116
>tr|A3BIX2|A3BIX2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022994 PE=4 SV=1 Length = 197
Score = 148 bits (374), Expect = 1e-34 Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 17/126 (13%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R +PNVLVTGTPGTGKT+T SLLA+A LRHIN+G+LV+EK LHDGWD +L CHI Sbjct: 10 RTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINEDL 69
Query: 210 XXXXXXXR-----------------MKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILY 338 M+ GG +VDYHGC+FFPERWFDLVVVLQTDNSIL+ Sbjct: 70 ESIGLPQPSNPVCTVPQVCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILH 129
Query: 339 DRLMNR 356 DRL +R Sbjct: 130 DRLTSR 135
>tr|A9S6I6|A9S6I6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181733 PE=4 SV=1 Length = 180
Score = 148 bits (373), Expect = 1e-34 Identities = 69/109 (63%), Positives = 79/109 (72%) Frame = +3
Query: 30 RQKPNVLVTGTPGTGKTSTASLLAEAAHLRHINVGELVKEKHLHDGWDPDLLCHIXXXXX 209 R KPN+LVTGTPGTGKTST SLLA+A L H+NVG+LVK K LHDGWD +L C I Sbjct: 7 RLKPNILVTGTPGTGKTSTCSLLADATGLTHLNVGDLVKLKSLHDGWDDELECFILNEDL 66
Query: 210 XXXXXXXRMKSGGNIVDYHGCEFFPERWFDLVVVLQTDNSILYDRLMNR 356 +K GG IVDYH C+ FPERWFD +VVLQTDN +LY+RL NR Sbjct: 67 LIDEMEDMVKGGGTIVDYHSCDIFPERWFDAIVVLQTDNGVLYERLTNR 115
|