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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947788
Clone id YMU02A01NGRM0001_A03
Library
Length 412
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_A03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCGGACCTCAGATCAGGCAAGGCTACCCGCTGAGTTTAAGCATATCACTAAGCGGAGGAA
AAGAAACTAACAAGGATTTCCCTAGTAGCGGCGAGCGAACCGGAAAGAGCCCAGCTTGAG
AATCGCGCGGCCTCGCCGTGCGAATTGTAGTCTGGAGAGGCGTCCTCTGCGACGGACCGG
GCCCAAGTCCCCTGGAAAGGGGCGTCAGAGAGGGTGAGAGCCCCGTCGAGCTCGGACCCT
GTCGCTCCACGAGGCGCCGTCGACGAGTCGGGCTGTTTGGGAATGCAGCCCTAAGTGGGT
GGTAGATTCCATCCAAGGCTAAATACGGGCAAGAGACCGATAGCGAACAAGTACCGTGAG
GGAAAGATGAAAAGGACTTTAAAAAAAACATGTCGGCCGCCTCGGCCCTCGC
■■Homology search results ■■ -
sp_hit_id Q6CQE5
Definition sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis
Align length 41
Score (bit) 68.6
E-value 9.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947788|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A03, 5'
         (380 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR...    69   9e-12
sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN...    68   2e-11
sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma...    32   1.3  
sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma...    32   1.3  
sp|Q31FH4|Y1507_THICR Maf-like protein Tcr_1507 OS=Thiomicrospir...    31   1.7  
sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculu...    31   1.7  
sp|A1B0E4|OXAA_PARDP Inner membrane protein oxaA OS=Paracoccus d...    31   1.7  
sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattu...    31   1.7  
sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus...    31   1.7  
sp|Q99PJ7|ZN689_RAT Zinc finger protein 689 OS=Rattus norvegicus...    30   3.7  
sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallid...    30   3.7  
sp|P30028|DPOL_HPBDC Protein P OS=Duck hepatitis B virus (strain...    30   4.8  
sp|P20160|CAP7_HUMAN Azurocidin OS=Homo sapiens GN=AZU1 PE=1 SV=3      30   4.8  
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ...    29   6.3  
sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1...    29   6.3  
sp|Q8TEQ6|GEMI5_HUMAN Gem-associated protein 5 OS=Homo sapiens G...    29   6.3  
sp|A2VDR9|ZN750_BOVIN Protein ZNF750 OS=Bos taurus GN=ZNF750 PE=...    29   8.2  
sp|Q8R4K8|PAPP1_MOUSE Pappalysin-1 OS=Mus musculus GN=Pappa PE=2...    29   8.2  

>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A
           PE=4 SV=2
          Length = 109

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRR 257
           K FSSF H TCSLSVS  YLALDGIYHPLRAAFPN+ TRR+
Sbjct: 21  KFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRK 61


>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae
           GN=TAR1 PE=2 SV=1
          Length = 124

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 33/47 (70%), Positives = 36/47 (76%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLVERQ 239
           K FSSF H TCSLSVS  YLALDGIYHPLRAAFPN+ T RR   + +
Sbjct: 36  KFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNR 82


>sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma
            OS=Mus musculus GN=Cdc42bpg PE=2 SV=2
          Length = 1551

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 120  ESRGLAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293
            ++R   + + V R VLC   GPGP P +R +RE ++P  +        R  VG  G  AL
Sbjct: 1188 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPAPVQSLGLLGDRLCVGAAGTFAL 1247


>sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma
            OS=Homo sapiens GN=CDC42BPG PE=1 SV=1
          Length = 1551

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 120  ESRGLAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293
            ++R   + + V R VLC   GPGP P +R +RE ++P  +        R  VG  G  AL
Sbjct: 1189 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPATVQSLGLLGDRLCVGAAGGFAL 1248


>sp|Q31FH4|Y1507_THICR Maf-like protein Tcr_1507 OS=Thiomicrospira
           crunogena (strain XCL-2) GN=Tcr_1507 PE=3 SV=1
          Length = 192

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 212 LSDAPFQGTWARSVAEDASPDYNSHGEAARFSSWALSGSLAA 87
           +SD+ F+  WA   AED +  Y   G+AA+F    + GS +A
Sbjct: 131 ISDSEFEQYWATGEAEDKAGAYGIQGQAAKFIE-KIEGSYSA 171


>sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculus
           GN=Prox2 PE=2 SV=1
          Length = 593

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 173 RTGPKSPGKGRQRG*EPRRARTLSLHEAPSTSRAVWECSPK 295
           R   + P KGR+R    +R ++L +H+ P  S   WE  PK
Sbjct: 89  RESLRCPEKGRER----KRKQSLPMHQGPLKSSPAWERGPK 125


>sp|A1B0E4|OXAA_PARDP Inner membrane protein oxaA OS=Paracoccus
           denitrificans (strain Pd 1222) GN=oxaA PE=3 SV=1
          Length = 635

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = +1

Query: 79  SLVAASEPERAQLENRAASPCEL*SGEASSATDRAQVPWKGASERVRAPSSSDPVAPRG- 255
           S+  A EP     +  AAS       EA        VP   A E   A +SSDP A  G 
Sbjct: 23  SIFFAPEPVPPAQDTPAASTQGTAQPEAGGPATPGAVPQGAAPELEAAAASSDPSANAGR 82

Query: 256 -AVDESGCLGMQP*VGGRFHPRLNTGKR 336
            A++ S   G     GGR      TG R
Sbjct: 83  VAIESSSLAGTISLAGGRIDDLELTGYR 110


>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus
           norvegicus GN=March11 PE=1 SV=1
          Length = 398

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +3

Query: 177 PGPSPLERGVREGESPVELGPCR 245
           P P+PLER V  GE PVEL P R
Sbjct: 45  PLPAPLERIVGSGEPPVELAPRR 67


>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus
           musculus GN=March11 PE=2 SV=2
          Length = 400

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +3

Query: 177 PGPSPLERGVREGESPVELGPCR 245
           P P+PLER V  GE PVEL P R
Sbjct: 45  PLPAPLERIVGSGEPPVELAPRR 67


>sp|Q99PJ7|ZN689_RAT Zinc finger protein 689 OS=Rattus norvegicus
           GN=Znf689 PE=2 SV=1
          Length = 500

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 219 SHPL*RPFPGDLGPVRRRGRLSR-LQFA 139
           S PL    PG++GP RRRGR  R L+FA
Sbjct: 5   SAPLLEQAPGEVGPTRRRGRRPRALKFA 32
tr_hit_id A5BKB8
Definition tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 76
Score (bit) 123.0
E-value 4.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947788|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A03, 5'
         (380 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis...   123   4e-27
tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01...    89   1e-16
tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematoste...    81   2e-14
tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematoste...    81   3e-14
tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematoste...    81   3e-14
tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematoste...    81   3e-14
tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematoste...    81   3e-14
tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematoste...    80   4e-14
tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematoste...    78   2e-13
tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematoste...    78   2e-13
tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematoste...    78   2e-13
tr|A7T1X8|A7T1X8_NEMVE Predicted protein (Fragment) OS=Nematoste...    75   2e-12
tr|A8DWE6|A8DWE6_NEMVE Predicted protein (Fragment) OS=Nematoste...    74   4e-12
tr|A9U5J8|A9U5J8_PHYPA Predicted protein OS=Physcomitrella paten...    70   5e-11
tr|Q3KTL6|Q3KTL6_SCHJA SJCHGC01393 protein OS=Schistosoma japoni...    67   4e-10
tr|B1N5S6|B1N5S6_ENTHI Putative uncharacterized protein OS=Entam...    67   4e-10
tr|A9TBN2|A9TBN2_PHYPA Predicted protein (Fragment) OS=Physcomit...    66   7e-10
tr|A9PE13|A9PE13_POPTR Putative uncharacterized protein OS=Popul...    59   9e-08
tr|A8NLF8|A8NLF8_BRUMA Putative uncharacterized protein (Fragmen...    58   3e-07
tr|Q223Q7|Q223Q7_TETTH Putative uncharacterized protein OS=Tetra...    55   2e-06
tr|A5AFX7|A5AFX7_VITVI Putative uncharacterized protein OS=Vitis...    55   2e-06
tr|B7RDP9|B7RDP9_9THEM Putative uncharacterized protein OS=Marin...    36   1e-04
tr|A1CUU5|A1CUU5_NEOFI Putative uncharacterized protein OS=Neosa...    42   0.012
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo...    39   0.018
tr|Q57J74|Q57J74_SALCH Putative uncharacterized protein OS=Salmo...    39   0.019
tr|A5B938|A5B938_VITVI Putative uncharacterized protein OS=Vitis...    41   0.033
tr|B6LZP2|B6LZP2_BRAFL Putative uncharacterized protein OS=Branc...    41   0.033
tr|A8PGP3|A8PGP3_BRUMA Putative uncharacterized protein OS=Brugi...    41   0.033
tr|Q652R5|Q652R5_ORYSJ Putative uncharacterized protein P0603C10...    35   0.059
tr|Q1MP77|Q1MP77_LAWIP Putative uncharacterized protein LI1146 O...    37   0.18 

>tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001840 PE=4 SV=1
          Length = 347

 Score =  123 bits (309), Expect = 4e-27
 Identities = 62/76 (81%), Positives = 64/76 (84%)
 Frame = +1

Query: 151 SGEASSATDRAQVPWKGASERVRAPSSSDPVAPRGAVDESGCLGMQP*VGGRFHPRLNTG 330
           SGEASSA DRAQVP KGA ERVRAPS  DPVAPRGAV ESGC GMQ   GG+F PRLNTG
Sbjct: 264 SGEASSAADRAQVPXKGAPERVRAPSCPDPVAPRGAVGESGCXGMQXQSGGKFRPRLNTG 323

Query: 331 KRPIANKYREGKMKRT 378
           +RPIANK REGKMKRT
Sbjct: 324 ERPIANKCREGKMKRT 339


>tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01.18
           OS=Oryza sativa subsp. japonica GN=P0459B01.18 PE=4 SV=1
          Length = 109

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 44/52 (84%), Positives = 44/52 (84%)
 Frame = -1

Query: 227 DGALTLSDAPFQGTWARSVAEDASPDYNSHGEAARFSSWALSGSLAATREIL 72
           DGALTL  APFQGTWARSVAEDASPDYNS G AARFSSWA  GSLA TR IL
Sbjct: 3   DGALTLPGAPFQGTWARSVAEDASPDYNSDGAAARFSSWASPGSLAVTRGIL 54


>tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76701 PE=4 SV=1
          Length = 70

 Score = 80.9 bits (198), Expect(2) = 2e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58



 Score = 20.8 bits (42), Expect(2) = 2e-14
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 246 SDRVRARRGSHP 211
           +DR R RRG HP
Sbjct: 59  NDRGRRRRGFHP 70


>tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g69522 PE=4 SV=1
          Length = 67

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g152336 PE=4 SV=1
          Length = 130

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 31  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 74


>tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76780 PE=4 SV=1
          Length = 70

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g153457 PE=4 SV=1
          Length = 59

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g156477 PE=4 SV=1
          Length = 60

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRR 254
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR+R
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKR 56


>tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g67728 PE=4 SV=1
          Length = 76

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 248
           K FSSFPHGTCSLSVSC YLALDG+Y P  AAFPN+PTRR+ +V
Sbjct: 21  KCFSSFPHGTCSLSVSCQYLALDGVYQPFWAAFPNNPTRRKHIV 64


>tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g126693 PE=4 SV=1
          Length = 54

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -2

Query: 379 KSFSSFPHGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRR 260
           K FSSFPHGTCSLSVSC YLALDG+YHP  AAFPN+PTRR
Sbjct: 15  KCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54