DK947705
Clone id YMU02A01NGRL0016_L24
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_L24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TGTGAGGATTTGAACATTGATGTATTGGGCGAGTCGGATCATCTCGAGTGTTACATGTCA
CCACGCACGCTTGTTATGTGCCATCACGACATTGTTTGAGTTTTAATTCTTGGACGTATA
CTTCTCATCTTGATGGAGAAATGTTGGTGGAACATGCATCACAACATGAAGAACTGTAAA
GCGAACGCTCAAAAGTGGGGATGGCGGCCCTCCCCCTCACGACGATTTTCAGACCATTCT
TTTGGACCTCGGTCCCCTGG
■■Homology search results ■■ -
sp_hit_id A8GQ54
Definition sp|A8GQ54|TIG_RICAH Trigger factor OS=Rickettsia akari (strain Hartford)
Align length 36
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947705|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_L24, 5'
(260 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8GQ54|TIG_RICAH Trigger factor OS=Rickettsia akari (strain H... 29 6.3
sp|Q5GRG2|EST7_RAT Carboxylesterase 7 OS=Rattus norvegicus GN=Ce... 29 8.2

>sp|A8GQ54|TIG_RICAH Trigger factor OS=Rickettsia akari (strain
Hartford) GN=tig PE=3 SV=1
Length = 445

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2

Query: 244 QKNGLKIVVRGRAAIPTFERSLYSSSCCDACSTNIS 137
Q N LK+V+ A IP+FE+ L S N++
Sbjct: 182 QLNDLKVVIGSNALIPSFEKQLIGSKTGSEVDVNVT 217


>sp|Q5GRG2|EST7_RAT Carboxylesterase 7 OS=Rattus norvegicus GN=Ces7
PE=2 SV=1
Length = 575

Score = 28.9 bits (63), Expect = 8.2
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -3

Query: 189 SVRFTVLHVVMHVPPTFLH 133
S T++HV++H+PP ++H
Sbjct: 365 STALTLIHVLLHIPPQYMH 383


tr_hit_id Q2RQR9
Definition tr|Q2RQR9|Q2RQR9_RHORT Putative uncharacterized protein OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Align length 39
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947705|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_L24, 5'
(260 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2RQR9|Q2RQR9_RHORT Putative uncharacterized protein OS=Rhodo... 33 7.1

>tr|Q2RQR9|Q2RQR9_RHORT Putative uncharacterized protein
OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
GN=Rru_A2729 PE=4 SV=1
Length = 187

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2

Query: 134 WRNVGGTCITT*RTVKRTLKSGDGGPPPHDDFQTILLDL 250
WR T I RTV+RT+K G PPPH D +T DL
Sbjct: 68 WRE---TVIRPLRTVRRTMK---GAPPPHRDLETPAADL 100