DK947547
Clone id YMU02A01NGRL0016_D22
Library
Length 166
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_D22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCATAAACTTGTTCATATTAAGAGGTGGTAGGAAGAGTCGTAGCAACAAGGTTTTTCATG
AGTCTTTCCAACAAGTGTGTATACTCCAGTTATGGCCAAATGGTCAATTGGGTGAGAACA
TTTGGTGGTTGGATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85B60
Definition sp|Q85B60|YCF2_ADICA Protein ycf2 OS=Adiantum capillus-veneris
Align length 37
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947547|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_D22, 5'
(136 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85B60|YCF2_ADICA Protein ycf2 OS=Adiantum capillus-veneris G... 30 3.7

>sp|Q85B60|YCF2_ADICA Protein ycf2 OS=Adiantum capillus-veneris
GN=ycf2-A PE=2 SV=2
Length = 2104

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3

Query: 42 SNKVFHESFQQ------VCILQLWPNGQLGENIWWLD 134
SNK+FHE + Q +LQ W N LG I LD
Sbjct: 1308 SNKIFHEPYPQDRSNVLAYLLQFWQNDLLGHKIRKLD 1344


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947547|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_D22, 5'
(136 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******