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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947508
Clone id YMU02A01NGRL0016_C03
Library
Length 438
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_C03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCGCGGCAGCGGCTACTA
CGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGC
TGTGCCGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCT
GGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGT
CTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCAC
TGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAAT
GAAACAACTTCCCAGTGGTGGCTTCNAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P10053
Definition sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii
Align length 78
Score (bit) 112.0
E-value 6.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947508|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C03, 5'
         (386 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   112   6e-25
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   112   6e-25
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   112   8e-25
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   111   1e-24
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   111   1e-24
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   111   1e-24
sp|O24045|RBS_MUSAC Ribulose bisphosphate carboxylase small chai...   110   2e-24
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   110   3e-24
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   110   3e-24
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   110   3e-24
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   109   5e-24
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   108   6e-24
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   108   6e-24
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   108   6e-24
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   108   8e-24
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   108   8e-24
sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   108   1e-23
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   107   1e-23
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   107   1e-23

>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  112 bits (280), Expect = 6e-25
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EFD  GS+ R++ R  GYYDGRYWVMWKLPMFGC +A+ V  E+ ECAK YP+AFIRV+
Sbjct: 93  LEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVI 152

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ   F+V KP
Sbjct: 153 GFDNVRQVQCISFIVHKP 170


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  112 bits (280), Expect = 6e-25
 Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   IEFD-KIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRV 178
           +EF+ + G VYREH    GYYDGRYW MWKLPMFGC D+A V +E+ EC KEYP AFIRV
Sbjct: 99  LEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRV 158

Query: 179 LGFDAKRQVQVSGFLVQKP 235
           +GFD  RQVQ   F+V KP
Sbjct: 159 IGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  112 bits (279), Expect = 8e-25
 Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   IEFD-KIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRV 178
           +EF+ + G VYREH R  GYYDGRYW MWKLPMFGC D++ V +E+ EC K YP AFIR+
Sbjct: 101 LEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRI 160

Query: 179 LGFDAKRQVQVSGFLVQKP 235
           +GFD KRQVQ+  F+  KP
Sbjct: 161 IGFDNKRQVQIISFIAYKP 179


>sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small chain
           A, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RBCS-A PE=2 SV=2
          Length = 175

 Score =  111 bits (278), Expect = 1e-24
 Identities = 47/78 (60%), Positives = 58/78 (74%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF K+G VYRE+ R  GYYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF+R++
Sbjct: 89  LEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRII 148

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ+  F+  KP
Sbjct: 149 GFDNVRQVQLISFIAYKP 166


>sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS
           PE=1 SV=1
          Length = 175

 Score =  111 bits (278), Expect = 1e-24
 Identities = 47/78 (60%), Positives = 58/78 (74%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF K+G VYRE+ R  GYYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF+R++
Sbjct: 89  LEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRII 148

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ+  F+  KP
Sbjct: 149 GFDNVRQVQLISFIAYKP 166


>sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2
           SV=2
          Length = 175

 Score =  111 bits (278), Expect = 1e-24
 Identities = 47/78 (60%), Positives = 58/78 (74%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF K+G VYRE+ R  GYYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF+R++
Sbjct: 89  LEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRII 148

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ+  F+  KP
Sbjct: 149 GFDNVRQVQLISFIAYKP 166


>sp|O24045|RBS_MUSAC Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1
          Length = 180

 Score =  110 bits (276), Expect = 2e-24
 Identities = 48/79 (60%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF   G V+RE+ R  GYYDGRYW MWKLPMFGC DA  V +E+ EC KEYP AFIR++
Sbjct: 100 LEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRII 159

Query: 182 GFDAKRQVQVSGFLVQKPS 238
           GFD  RQVQ   F+  KP+
Sbjct: 160 GFDNNRQVQCISFIAYKPT 178


>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain
           3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2
           SV=1
          Length = 179

 Score =  110 bits (274), Expect = 3e-24
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF   G V R++ +  GYYDGRYW MWKLPMFGC DAA V +E AEC KEYP AFIRV+
Sbjct: 101 LEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVI 160

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ   F+V+KP
Sbjct: 161 GFDNVRQVQCVSFIVEKP 178


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  110 bits (274), Expect = 3e-24
 Identities = 47/73 (64%), Positives = 53/73 (72%)
 Frame = +2

Query: 20  GSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVLGFDAKR 199
           G VYREH    GYYDGRYW MWKLPMFGC D A V  E+ EC KEYP AFIR++GFD+ R
Sbjct: 106 GFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNR 165

Query: 200 QVQVSGFLVQKPS 238
           QVQ   F+  KP+
Sbjct: 166 QVQCVSFIAYKPA 178


>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2
           SV=1
          Length = 179

 Score =  110 bits (274), Expect = 3e-24
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EF   G V R++ +  GYYDGRYW MWKLPMFGC DAA V +E AEC KEYP AFIRV+
Sbjct: 101 LEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVI 160

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  RQVQ   F+V+KP
Sbjct: 161 GFDNVRQVQCVSFIVEKP 178
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 79
Score (bit) 149.0
E-value 5.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947508|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C03, 5'
         (386 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   149   5e-35
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   115   8e-25
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   115   8e-25
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   115   1e-24
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   115   1e-24
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   115   1e-24
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   114   2e-24
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   114   2e-24
tr|A9TYN7|A9TYN7_PHYPA Ribulose bisphosphate carboxylase small c...   114   2e-24
tr|Q7XYK5|Q7XYK5_BIGNA Ribulose-1,5-bisphosphate carboxylase/oxy...   114   3e-24
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   114   3e-24
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   114   3e-24
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   114   3e-24
tr|Q2QTK0|Q2QTK0_ORYSJ Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|Q2QTJ7|Q2QTJ7_ORYSJ Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|Q2QTJ1|Q2QTJ1_ORYSJ Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|Q0INU2|Q0INU2_ORYSJ Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|B7E6P1|B7E6P1_ORYSJ cDNA clone:001-032-F07, full insert seque...   111   2e-23
tr|A6N1G6|A6N1G6_ORYSI Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|A6N149|A6N149_ORYSI Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|A6N0B6|A6N0B6_ORYSI Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|A6MZQ8|A6MZQ8_ORYSI Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|A3CGJ9|A3CGJ9_ORYSJ Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|A2ZJQ0|A2ZJQ0_ORYSI Ribulose bisphosphate carboxylase small c...   111   2e-23
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   110   3e-23
tr|A5JPN4|A5JPN4_MUSAC Ribulose bisphosphate carboxylase small c...   110   3e-23
tr|A3F6J6|A3F6J6_CUCSA Ribulose bisphosphate carboxylase small c...   110   3e-23
tr|Q36688|Q36688_ORYSA Ribulose bisphosphate carboxylase small c...   110   4e-23
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   110   4e-23
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   110   4e-23

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  149 bits (377), Expect = 5e-35
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           IEFD IGSVYREHF GSGYYDGRYW+MWKLPMFGC D+ +V REIAECAKEYP AFIRVL
Sbjct: 95  IEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVL 154

Query: 182 GFDAKRQVQVSGFLVQKPS 238
           GFDAKRQVQV+GFLV+KPS
Sbjct: 155 GFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  115 bits (289), Expect = 8e-25
 Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRG---SGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A V REI EC + +P  ++
Sbjct: 98  IEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWV 157

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 158 RVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  115 bits (289), Expect = 8e-25
 Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRG---SGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A V REI EC + +P  ++
Sbjct: 98  IEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWV 157

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 158 RVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  115 bits (288), Expect = 1e-24
 Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRG---SGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V REI EC  ++P  ++
Sbjct: 133 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 192

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 193 RVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  115 bits (288), Expect = 1e-24
 Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRG---SGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V REI EC  ++P  ++
Sbjct: 103 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWV 162

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVSRPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  115 bits (287), Expect = 1e-24
 Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRG---SGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ V REI EC  ++P  ++
Sbjct: 102 IEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWV 161

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 RVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  114 bits (285), Expect = 2e-24
 Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   IEFD-KIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRV 178
           +EF+ + G VYREH    GYYDGRYW MWKLPMFGC D+A V +E+ EC KEYP AFIRV
Sbjct: 99  LEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRV 158

Query: 179 LGFDAKRQVQVSGFLVQKP 235
           +GFD+ RQVQ   F+V KP
Sbjct: 159 IGFDSVRQVQCISFIVSKP 177


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  114 bits (285), Expect = 2e-24
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSG---YYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +G+V R +F GSG   YYDGRYW MWKLPMFGC D++ V REI EC   YP  ++
Sbjct: 103 IEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWV 162

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 163 RVLGFDSKKQVQICGFLVARPN 184


>tr|A9TYN7|A9TYN7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_226715 PE=3 SV=1
          Length = 91

 Score =  114 bits (285), Expect = 2e-24
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSG---YYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFI 172
           IEFD +G+V R +F GSG   YYDGRYW MWKLPMFGC D++ V REI EC   YP  ++
Sbjct: 10  IEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWV 69

Query: 173 RVLGFDAKRQVQVSGFLVQKPS 238
           RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 70  RVLGFDSKKQVQICGFLVARPN 91


>tr|Q7XYK5|Q7XYK5_BIGNA Ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit 2 (Fragment)
           OS=Bigelowiella natans PE=2 SV=1
          Length = 252

 Score =  114 bits (284), Expect = 3e-24
 Identities = 51/78 (65%), Positives = 59/78 (75%)
 Frame = +2

Query: 2   IEFDKIGSVYREHFRGSGYYDGRYWVMWKLPMFGCQDAAAVPREIAECAKEYPEAFIRVL 181
           +EFDK G ++REH R  GYYDGRYW MWKLPMFG  DA AV REIAEC +  P++FIRVL
Sbjct: 108 VEFDKGGQIFREHSRMPGYYDGRYWTMWKLPMFGATDAGAVMREIAECKQNNPDSFIRVL 167

Query: 182 GFDAKRQVQVSGFLVQKP 235
           GFD  +QVQ  GFL  +P
Sbjct: 168 GFDNIKQVQCMGFLASRP 185