DK947373 |
Clone id |
YMU02A01NGRL0015_K22 |
Library |
YMU02 |
Length |
477 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K22. 5' end sequence. |
Accession |
DK947373 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GTACCAAACTCCAGATAGAGTGATTGTACGCAGAATTCTTTATGGCCATCTCCATAGCCG CTTCCTCGGTAGTTGTCTCTCCTAGCTGCGCCCCCCCTAAGAGCTTGTCCAAGAACTTCT CTGGTCTCAAGGTCACTACCCTGTTCGCCCCCAAGATGCCCAACCCGCTCACCATCTCTC ATGTCAGCCTTGTGAGCGCCATGCTTGTGTGCAACCCGTATGACTGCAAGAAGTTCGAGA CTCTGTCCTACTTGACTCCTTTGTCCTTTGAGCATATTGCGAATCAGGTGAACTTCATGG TCCTAAAATGCTGGACCCCTTGCATTGAGTTCGACTGAATCGGGAGCGTGCTGCTTGAAA TTGTGTAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCACGTGCTGTGCTTTGACACTT AGAGGCTGGTGCAGGTCTCCTGCTTCCTTGTCCATAATCCCTCTGTCTAAACTTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P17673 |
Definition |
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens |
Align length |
158 |
Score (bit) |
75.1 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947373|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_K22, 5' (477 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 75 1e-13 sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 74 3e-13 sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 73 7e-13 sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 72 1e-12 sp|P18960|RBS_SILPR Ribulose bisphosphate carboxylase small chai... 71 2e-12 sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 71 3e-12 sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai... 70 6e-12 sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 69 8e-12 sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai... 69 8e-12 sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 69 1e-11 sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 69 1e-11 sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 69 1e-11 sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 68 2e-11 sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 68 2e-11 sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 67 3e-11 sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 67 4e-11 sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha... 67 5e-11 sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 66 7e-11 sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 66 7e-11 sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 66 7e-11 sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 66 7e-11 sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 66 7e-11 sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 66 7e-11 sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 66 9e-11 sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 65 1e-10 sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha... 65 2e-10 sp|Q08184|RBS4_MESCR Ribulose bisphosphate carboxylase small cha... 65 2e-10 sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 65 2e-10 sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 65 2e-10 sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha... 65 2e-10
>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1 Length = 178
Score = 75.1 bits (183), Expect = 1e-13 Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 36/158 (22%) Frame = +3
Query: 102 SLSKNFSGLKVTTLF-APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFE 272 +L+ F+GLK + F K N +T S+ S V+ M V P KKFETLSYL PL+ E Sbjct: 20 NLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDE 79
Query: 273 HIANQVNFMVLKCWTPCIEFD---------------------------------*IGSVL 353 + +V +++ K W PC+EF+ VL Sbjct: 80 QLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVL 139
Query: 354 LEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPSV 467 E+ C EYPEAFI ++ FD R VQ F+ P V Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177
>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1 Length = 171
Score = 74.3 bits (181), Expect = 3e-13 Identities = 54/155 (34%), Positives = 69/155 (44%), Gaps = 40/155 (25%) Frame = +3
Query: 117 FSGLKVTTLFAP--KMPNPL------TISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFE 272 F+GLK T F KM N T S+ V M V P+ KFETLSYL L+ E Sbjct: 16 FTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEE 75
Query: 273 HIANQVNFMVLKCWTPCIEFD*IGS--------------------------------VLL 356 + +V +++ W PC+EFD GS V+ Sbjct: 76 QLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVIN 135
Query: 357 EIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461 E+ CAK YP+AFI V+ FD R VQ F+VH P Sbjct: 136 EVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1 Length = 180
Score = 72.8 bits (177), Expect = 7e-13 Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 37/152 (24%) Frame = +3
Query: 117 FSGLKVTTLF--APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284 F+GLK + F K N +T S+ V+ M V P KKFETLSYL PL+ E +A Sbjct: 26 FTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAK 85
Query: 285 QVNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV 365 +V +++ K W PC+EF+ VL E+ Sbjct: 86 EVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELA 145
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461 C EYP++FI ++ FD R VQ F+ H P Sbjct: 146 DCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1 Length = 189
Score = 72.0 bits (175), Expect = 1e-12 Identities = 47/129 (36%), Positives = 59/129 (45%), Gaps = 32/129 (24%) Frame = +3
Query: 171 TISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQVNFMVLKCWTPCIEFD*IG-- 344 T S+ S V M V PY KKFETLSYL L+ E + +V +++ W PC+EF+ G Sbjct: 58 TTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEI 117
Query: 345 ------------------------------SVLLEIV*CAKEYPEAFIHVLCFDT*RLVQ 434 VL E+ CAK YP AFI V+ FD R VQ Sbjct: 118 KRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQ 177
Query: 435 VSCFLVHNP 461 F+VH P Sbjct: 178 CISFIVHKP 186
>sp|P18960|RBS_SILPR Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1 Length = 177
Score = 71.2 bits (173), Expect = 2e-12 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 38/153 (24%) Frame = +3
Query: 117 FSGLKVTTLFAPKMPNPLTISHVSL----VSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284 FSGLK T+ F + + I+ ++ V+ M V P + KKFETLSYL LS E + Sbjct: 25 FSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLK 84
Query: 285 QVNFMVLKCWTPCIEFD*IG----------------------------------SVLLEI 362 ++N++++K W PC+EF+ +G V E+ Sbjct: 85 EINYLLIKGWVPCLEFE-VGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEV 143
Query: 363 V*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461 V C YP+A + ++ FD R VQ F+ + P Sbjct: 144 VECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1 Length = 180
Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 33/149 (22%) Frame = +3
Query: 120 SGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQVNFM 299 +GLK T ++ S VS M V PY+ KFETLSYL PLS + +A Q++++ Sbjct: 32 AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91
Query: 300 VLKCWTPCIEFD*IG--------------------------------SVLLEIV*CAKEY 383 + W PCIEFD G SVL EI C K Y Sbjct: 92 IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151
Query: 384 -PEAFIHVLCFDT*RLVQVSCFLVHNPSV 467 + +I L FD R VQ + F+VH P++ Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFIVHQPTL 180
>sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1 Length = 189
Score = 69.7 bits (169), Expect = 6e-12 Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 38/163 (23%) Frame = +3
Query: 102 SLSKNFSGLKVTTLFAPKMPNPLTI----SHVSLVSAMLVCNPYDCKKFETLSYLTPLSF 269 S+ F+GLK + F N + I S+ V M V P +KFETLSYL +S Sbjct: 23 SMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSN 82
Query: 270 EHIANQVNFMVLKCWTPCIEFD*IGS---------------------------------- 347 E ++ + ++++ W PC+EFD IGS Sbjct: 83 EQLSKECDYLLRNGWVPCVEFD-IGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQ 141
Query: 348 VLLEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPSV*TF 476 V+ EI KEYP+AFI V+ FD R VQ F+ + P V F Sbjct: 142 VIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQVLLF 184
>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1 Length = 183
Score = 69.3 bits (168), Expect = 8e-12 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 36/152 (23%) Frame = +3
Query: 117 FSGLKVTTLF-APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQ 287 F+GLK ++ F + N +T S+ V M V P KKFETLSYL PLS E +A + Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89
Query: 288 VNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV* 368 V++++ K W PC+EF+ VL E+ Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149
Query: 369 CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 K YP++FI ++ FD R VQ F+ + P+ Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181
>sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1 Length = 182
Score = 69.3 bits (168), Expect = 8e-12 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 37/152 (24%) Frame = +3
Query: 117 FSGLKVTTLFAP--KMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284 F+GLK T F K N +T S+ V M V P +KFETLSYL PLS E +A Sbjct: 28 FTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAK 87
Query: 285 QVNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV 365 Q+ +++LK W PC+EF+ VL E+ Sbjct: 88 QIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQ 147
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461 +K YP + I ++ FD R VQ F+ + P Sbjct: 148 EASKTYPTSHIRIIGFDNKRQVQCISFIAYKP 179
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1 Length = 181
Score = 68.9 bits (167), Expect = 1e-11 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 37/157 (23%) Frame = +3
Query: 102 SLSKNFSGLKVTTLF--APKMPNPLTI--SHVSLVSAMLVCNPYDCKKFETLSYLTPLSF 269 SL+ F+GLK F K N + S+ V M V P KK+ETLSYL PLS Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80
Query: 270 EHIANQVNFMVLKCWTPCIEFD---------------------------------*IGSV 350 E ++ ++++++ W PC+EF+ V Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140
Query: 351 LLEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461 + E+ C KEYP AFI V+ FD R VQ F+V P Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q43110 |
Definition |
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata |
Align length |
154 |
Score (bit) |
140.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947373|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_K22, 5' (477 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 140 3e-32 tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 86 7e-16 tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 83 6e-15 tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 82 1e-14 tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 82 1e-14 tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 82 2e-14 tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 81 2e-14 tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 81 3e-14 tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 81 3e-14 tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 81 3e-14 tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 80 4e-14 tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 80 7e-14 tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 79 1e-13 tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 79 1e-13 tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c... 79 1e-13 tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 78 2e-13 tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 78 3e-13 tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 77 4e-13 tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 76 1e-12 tr|A9NXP2|A9NXP2_PICSI Ribulose bisphosphate carboxylase small c... 75 2e-12 tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c... 75 2e-12 tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c... 75 2e-12 tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c... 74 3e-12 tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c... 74 3e-12 tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c... 74 3e-12 tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c... 74 3e-12 tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c... 74 3e-12 tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 74 5e-12 tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 74 5e-12 tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 74 5e-12
>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1 Length = 174
Score = 140 bits (353), Expect = 3e-32 Identities = 84/154 (54%), Positives = 92/154 (59%), Gaps = 32/154 (20%) Frame = +3
Query: 99 KSLSKNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHI 278 +SLSK+FSGLK TLFAPK NPL IS+ S +SAMLV PYD KKFETLSYL PL+ + I Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79
Query: 279 ANQVNFMVLKCWTPCIEFD*I--------------------------------GSVLLEI 362 A QV +MV K WTPCIEFD I GSVL EI Sbjct: 80 AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139
Query: 363 V*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 CAKEYP AFI VL FD R VQV+ FLV PS Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173
>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87740 PE=3 SV=1 Length = 179
Score = 86.3 bits (212), Expect = 7e-16 Identities = 57/153 (37%), Positives = 74/153 (48%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TTLFA K ++ + S V M V NP KFET SYL PL+ + IA QV Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 +FM+ + PCIEFD +GS VL EI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C + +P ++ VL FD+ + VQ+ FLV P+ Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87752 PE=3 SV=1 Length = 179
Score = 83.2 bits (204), Expect = 6e-15 Identities = 56/153 (36%), Positives = 73/153 (47%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TTL A K ++ + S V M V NP KFET SYL PL+ + IA QV Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 +FM+ + PCIEFD +GS VL EI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C + +P ++ VL FD+ + VQ+ FLV P+ Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small chain (Fragment) OS=Physcomitrella patens PE=2 SV=1 Length = 214
Score = 82.4 bits (202), Expect = 1e-14 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TLF+ K ++ + S V M V NP KFET SYL PL+ + IA QV Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 ++M+ + PCIEFD +GS VL EI Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C ++P ++ VL FD+ + VQ+ FLV P+ Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214
>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PprbcS1 PE=2 SV=1 Length = 184
Score = 82.4 bits (202), Expect = 1e-14 Identities = 55/153 (35%), Positives = 71/153 (46%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TLF K ++ + S V M V NP KFET SYL PLS + IA QV Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 ++M+ + PCIEFD +G+ VL EI Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C YP ++ VL FD+ + VQ+ FLV P+ Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184
>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221004 PE=3 SV=1 Length = 184
Score = 81.6 bits (200), Expect = 2e-14 Identities = 54/153 (35%), Positives = 72/153 (47%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TLF+ K + + S V M V NP KFET SYL PL+ + IA QV Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 ++M+ + PCIEFD +GS VL EI Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C ++P ++ VL FD+ + VQ+ FLV P+ Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184
>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115069 PE=3 SV=1 Length = 181
Score = 81.3 bits (199), Expect = 2e-14 Identities = 54/150 (36%), Positives = 69/150 (46%), Gaps = 32/150 (21%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK T+F+ K N ++ + S V M V NP KFET SYL PLS + IA QV Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 291 NFMVLKCWTPCIEFD*I--------------------------------GSVLLEIV*CA 374 +M+ + PC+EFD VL EI C Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 375 KEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 K +P F+ VL FD + VQ+ FLV P+ Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225236 PE=3 SV=1 Length = 183
Score = 80.9 bits (198), Expect = 3e-14 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 35/153 (22%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TLF+ + ++ + S V M V NP KFET SYL PL+ + IA QV Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90
Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365 ++M+ + PCIEFD +GS VL EI Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150
Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 C ++P ++ VL FD+ + VQ+ FLV P+ Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183
>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146969 PE=3 SV=1 Length = 181
Score = 80.9 bits (198), Expect = 3e-14 Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 32/150 (21%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK +TLF+ K + ++ + S V M V NP KFET SYL PLS + IA QV Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 291 NFMVLKCWTPCIEFD*I--------------------------------GSVLLEIV*CA 374 ++M+ + PC+EFD VL EI C Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151
Query: 375 KEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 K +P F+ VL FD + VQ+ FLV P+ Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233894 PE=3 SV=1 Length = 182
Score = 80.9 bits (198), Expect = 3e-14 Identities = 55/151 (36%), Positives = 69/151 (45%), Gaps = 33/151 (21%) Frame = +3
Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290 K FSGLK TTLF+ K ++ + S V M V NP KFET SYL PLS + IA QV Sbjct: 32 KAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 291 NFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV*C 371 +M+ + PC+EFD VL EI C Sbjct: 92 EYMIQQKLIPCLEFDVNANGVSRANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151
Query: 372 AKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464 K +P F+ VL FD + VQ+ FLV P+ Sbjct: 152 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 182
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