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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947260
Clone id YMU02A01NGRL0015_F08
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_F08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
AACTCTCTGTCTTGTGCACTCGCTGATCATCTCTTGACCGTCAGTGACACTGACAAGCTC
ATGTGGCTTCTTTGTGACTTACTGCTCCCTCGACGCGCCCGGGCCGACAGCCCATCTAAG
ACGCATCTCCGGCCTCAGGCCCACTACCCTCACTGCCCCCTATACCGCCTACCCGCTCTC
CGTCTCGGACTGACGCCACGTGAGCTCCTTGCGTGTGTGGAAGACGTATGACTACAAGAA
GTTCTAGACTCTGTCCTACTTGCCGGCTTTGACAAGCGATCAGATAGCGAAGCACGTGGA
CTTCATGGTCCGGAAGGGCTGGACCCCCTGCTTTGAGTTCTACAAAATCGGACGCGTATA
CTGAGAGCACTTCCATGGCAGCGGCTACTACGATGGGCGATACTGGGTGATGTGGAATTT
GCCCATGTTTGGCTGCCAAGATGCCGCCGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAA
GGAGTACCCCGAAGCCATCATCCGCGTGCTGG
■■Homology search results ■■ -
sp_hit_id P00871
Definition sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum
Align length 111
Score (bit) 132.0
E-value 7.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947260|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F08, 5'
         (512 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   132   7e-31
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   132   1e-30
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   131   2e-30
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   131   2e-30
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   130   3e-30
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   130   4e-30
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   129   1e-29
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   128   1e-29
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   127   2e-29
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   127   3e-29
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   127   3e-29
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   127   3e-29
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   127   3e-29
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   127   4e-29
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   127   4e-29
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   127   4e-29
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   126   5e-29
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   126   5e-29
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   126   5e-29
sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chai...   126   7e-29
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   126   7e-29
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   126   7e-29
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   125   9e-29
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   125   9e-29
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   125   9e-29
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   125   9e-29
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   125   1e-28

>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  132 bits (333), Expect = 7e-31
 Identities = 58/111 (52%), Positives = 76/111 (68%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ ++K VD+++R  W PC EF K+G V
Sbjct: 37  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFV 96

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 97  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 147


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  132 bits (331), Expect = 1e-30
 Identities = 55/104 (52%), Positives = 74/104 (71%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRVY*EHFHG 379
           V  ++VW     KKF TLSYLP LT +Q+ + VD+++R GW PC EF K+G VY E+ + 
Sbjct: 54  VRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNS 113

Query: 380 SGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
            GYYDGRYW MW LPMFGC D++ VL+E+ EC+K YP+   R++
Sbjct: 114 PGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  132 bits (331), Expect = 1e-30
 Identities = 58/111 (52%), Positives = 75/111 (67%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G V
Sbjct: 38  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 97

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 98  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 148


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  131 bits (330), Expect = 2e-30
 Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEF-YKIGRVY*EHFH 376
           V  ++VW     KK+ TLSYLP L+ + ++K +D+++R  W PC EF  + G VY EH H
Sbjct: 55  VQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHH 114

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LPMFGC D+A V++E+ EC KEYP A IRV+
Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  131 bits (330), Expect = 2e-30
 Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEF-YKIGRVY*EHFH 376
           V  ++VW     KK+ TLSYLP LT  Q+AK VD+++RK W PC EF  + G VY E+  
Sbjct: 53  VQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENAR 112

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LPMFGC D+A V++E+AEC KEYP+A IR++
Sbjct: 113 SPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRII 157


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  131 bits (330), Expect = 2e-30
 Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKI-GRVY*EHFH 376
           V  ++VW T + K++ TLSYLP LT+DQ+A+ VD+++   W PC EF    G VY EH +
Sbjct: 55  VQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHN 114

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LPMFGC D A VL E+ EC KEYP A IR++
Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRII 159


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  130 bits (328), Expect = 3e-30
 Identities = 56/111 (50%), Positives = 75/111 (67%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G +
Sbjct: 37  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFI 96

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +R++
Sbjct: 97  FREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRII 147


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  130 bits (327), Expect = 4e-30
 Identities = 58/105 (55%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEF-YKIGRVY*EHFH 376
           V+ ++VW     KKF TLSYLP LT  ++AK VD+++R  W PC EF  + G VY EH +
Sbjct: 53  VNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGN 112

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LP+FGC D+A VL+E+ EC KEYP A IR++
Sbjct: 113 SPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRII 157


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  129 bits (323), Expect = 1e-29
 Identities = 57/111 (51%), Positives = 74/111 (66%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           +VS+   +  ++VW  Y  KKF TLSYLP L++D + K VD+++R GW PC EF K+G V
Sbjct: 38  NVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFV 97

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           Y E+     YYDGRYW MW LPMFGC DA  V +E+ E  K YP+A  RV+
Sbjct: 98  YRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVI 148


>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain
           1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B
           PE=1 SV=1
          Length = 181

 Score =  128 bits (322), Expect = 1e-29
 Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEF-YKIGRVY*EHFH 376
           VS ++VW     KKF TLSYLP LT  ++AK VD+++R  W PC EF  + G VY EH +
Sbjct: 53  VSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGN 112

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LP+FGC D+A VL+E+ EC KEYP A IR++
Sbjct: 113 TPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRII 157
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 131
Score (bit) 179.0
E-value 7.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947260|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_F08, 5'
         (512 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   179   7e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   138   2e-31
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   134   3e-30
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   133   6e-30
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   132   8e-30
tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c...   132   8e-30
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAX0|Q9SAX0_AEGSE Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAW9|Q9SAW9_AEGTA Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAW8|Q9SAW8_TRITI Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9SAW4|Q9SAW4_SECCE Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9FRZ2|Q9FRZ2_WHEAT Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q575T3|Q575T3_TRITU Ribulose bisphosphate carboxylase small c...   132   1e-29
tr|Q9ZRS5|Q9ZRS5_SECCE Ribulose bisphosphate carboxylase small c...   131   2e-29
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c...   131   2e-29
tr|Q9SAX4|Q9SAX4_AEGSP Ribulose bisphosphate carboxylase small c...   131   2e-29
tr|Q9SAX3|Q9SAX3_AEGSP Ribulose bisphosphate carboxylase small c...   131   2e-29
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c...   131   2e-29
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   131   2e-29

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  179 bits (454), Expect = 7e-44
 Identities = 83/131 (63%), Positives = 97/131 (74%)
 Frame = +2

Query: 119 RRISGLRXXXXXXXXXXXXXSVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHV 298
           +  SGL+             ++S+   +S++ VWK YD KKF TLSYLP LT+DQIAK V
Sbjct: 24  KSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQV 83

Query: 299 DFMVRKGWTPCFEFYKIGRVY*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECA 478
           ++MVRKGWTPC EF  IG VY EHFHGSGYYDGRYW+MW LPMFGC D+ +VLREIAECA
Sbjct: 84  EYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECA 143

Query: 479 KEYPEAIIRVL 511
           KEYP A IRVL
Sbjct: 144 KEYPTAFIRVL 154


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  138 bits (347), Expect = 2e-31
 Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = +2

Query: 200 VSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEF-YKIGRVY*EHFH 376
           V  ++VW     KKF TLSYLP LT +Q++K VD+++R GW PC EF  + G VY EH H
Sbjct: 56  VQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHH 115

Query: 377 GSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
             GYYDGRYW MW LPMFGC D++ VL+E+ EC KEYP A IR++
Sbjct: 116 SPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRII 160


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
          Length = 165

 Score =  134 bits (337), Expect = 3e-30
 Identities = 58/111 (52%), Positives = 76/111 (68%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G V
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH+   GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 93  FREHYSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143


>tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Avena clauda GN=rbcS PE=3 SV=1
          Length = 168

 Score =  133 bits (335), Expect = 4e-30
 Identities = 56/111 (50%), Positives = 77/111 (69%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW T   KKF TLSYLP L+ + + K +DF++R  W PC EF K+G +
Sbjct: 33  SVSNGGRIRCMQVWPTEGIKKFETLSYLPPLSEEALLKQIDFLIRSKWVPCLEFSKVGFI 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA+ V++E+ E  KEYP+A +R++
Sbjct: 93  FREHGSTPGYYDGRYWTMWKLPMFGCTDASQVIKEVEEVKKEYPDAYVRII 143


>tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Hordeum vulgare GN=rbcS PE=3 SV=1
          Length = 165

 Score =  133 bits (334), Expect = 6e-30
 Identities = 58/111 (52%), Positives = 75/111 (67%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP LT++ + K VD+++R  W PC EF K+G V
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFV 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +R++
Sbjct: 93  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRII 143


>tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small
           chain OS=Secale cereale PE=2 SV=1
          Length = 175

 Score =  132 bits (333), Expect = 8e-30
 Identities = 58/111 (52%), Positives = 76/111 (68%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G V
Sbjct: 38  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 97

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH +  GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 98  FREHNNSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 148


>tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Avena sterilis subsp. ludoviciana
           GN=rbcS PE=2 SV=1
          Length = 168

 Score =  132 bits (333), Expect = 8e-30
 Identities = 56/111 (50%), Positives = 76/111 (68%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP LT + + K +DF++R  W PC EF K+G +
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTEEALLKQIDFLIRSKWVPCLEFSKVGFI 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA+ V++E+ E  KEYP+A +R++
Sbjct: 93  FREHGSTPGYYDGRYWTMWKLPMFGCTDASQVIKEVEEVKKEYPDAYVRII 143


>tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Avena maroccana GN=rbcS PE=2 SV=1
          Length = 168

 Score =  132 bits (332), Expect = 1e-29
 Identities = 56/111 (50%), Positives = 76/111 (68%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+ + + K +DF++R  W PC EF K+G +
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSEEALLKQIDFLIRSKWVPCLEFSKVGFI 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA+ V+RE+ E  KEYP+A +R++
Sbjct: 93  FREHGSTPGYYDGRYWTMWKLPMFGCTDASQVIREVEEVKKEYPDAYVRII 143


>tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small
           chain OS=Triticum aestivum GN=rbcS PE=3 SV=1
          Length = 174

 Score =  132 bits (332), Expect = 1e-29
 Identities = 58/110 (52%), Positives = 75/110 (68%)
 Frame = +2

Query: 182 VSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRVY 361
           VS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G V+
Sbjct: 38  VSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVF 97

Query: 362 *EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
            EH   SGYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 98  REHNSSSGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 147


>tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Aegilops sharonensis GN=rbcS PE=3
           SV=1
          Length = 165

 Score =  132 bits (331), Expect = 1e-29
 Identities = 58/111 (52%), Positives = 75/111 (67%)
 Frame = +2

Query: 179 SVSD*RHVSSLRVWKTYDYKKF*TLSYLPALTSDQIAKHVDFMVRKGWTPCFEFYKIGRV 358
           SVS+   +  ++VW     KKF TLSYLP L+++ + K VD+++R  W PC EF K+G V
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 92

Query: 359 Y*EHFHGSGYYDGRYWVMWNLPMFGCQDAAAVLREIAECAKEYPEAIIRVL 511
           + EH    GYYDGRYW MW LPMFGC DA  VL E+ E  KEYP+A +RV+
Sbjct: 93  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143