DK947247
Clone id YMU02A01NGRL0015_E16
Library
Length 243
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_E16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATCGCCTTTATCAATCAACTTCAAGCAATTGGTGTATGTTAATCTATTTTTGGAAATAT
TGAGTTTAAGGATGAAATAACCTCCCTATTAGAACAAAGATATATCCCAAATAAGTATTT
AAATGTTATTTCACGTCAATGTAAGAATTTGACCGATCTTAAAGCATATTGTGAGAGCGC
AAGATACAGGGAATTTCTTAGACTTCCATACCACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
■■Homology search results ■■ -
sp_hit_id B0K2V6
Definition sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514)
Align length 21
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947247|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_E16, 5'
(214 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase OS=T... 30 4.9
sp|B0K8S2|MTNA_THEP3 Methylthioribose-1-phosphate isomerase OS=T... 30 4.9

>sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase
OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3
SV=1
Length = 345

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2

Query: 56 NIEFKDEITSLLEQRYIPNKY 118
+IEFK+E+ L++QR +PN Y
Sbjct: 6 SIEFKNEVLYLIDQRKLPNSY 26


>sp|B0K8S2|MTNA_THEP3 Methylthioribose-1-phosphate isomerase
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=mtnA PE=3 SV=1
Length = 345

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2

Query: 56 NIEFKDEITSLLEQRYIPNKY 118
+IEFK+E+ L++QR +PN Y
Sbjct: 6 SIEFKNEVLYLIDQRKLPNSY 26


tr_hit_id A8ERA5
Definition tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein OS=Arcobacter butzleri (strain RM4018)
Align length 39
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947247|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_E16, 5'
(214 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein OS=Arcob... 33 9.4

>tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein
OS=Arcobacter butzleri (strain RM4018) GN=Abu_0202 PE=4
SV=1
Length = 430

Score = 32.7 bits (73), Expect = 9.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2

Query: 47 IFGNIEFKDEITSLLEQRYIPNKYLNVISRQCKNLTDLK 163
I+GN FK EI +L+ I NVI ++ NL DLK
Sbjct: 5 IYGNQRFKKEIYKILDSSQIKKIDNNVIIKEISNLNDLK 43