DK947235
Clone id YMU02A01NGRL0015_E04
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_E04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GGGACCAAGTAATGGATGATGGCGCAGTGGTTTTCGTGCTTCCGCTGCTCCCACTGCTGT
AGTCCGAGCGTCCAACTTTTGGGCACTCGACGGTACCATTTTGTGTGCGCAGCTGAGAGA
GGATGGATTCCAAATTATGGCTGAAGGTCGCGGGTCTATCTGGAGTAGCAGCACTGGGCC
TTGGCACTTATGGTGCCCATATGTTTAAGCCAGACAACCCAGCGTACAAAGAGGTCTGGC
AAACGGCAAGTTTGTATCACCTTGTACACACATCAGCTCTTCTTGCTGCACCTCTAACGA
AACGTCCTCATATAGTAAGTACAAACAGAGAGAAGTTCTTATGTGGTTGGCATAATTAAA
CATGTACATGATTTCAACATTTGTAGGACATCTCTTCCTCATACCCATGTACATCAATTG
AATTGCGAGTGAGTGGTATTTGGAAGGCTTCGGACAGAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
■■Homology search results ■■ -
sp_hit_id A4K526
Definition sp|A4K526|CQ061_BUFBG UPF0451 protein C17orf61 homolog OS=Bufo bufo gargarizans
Align length 42
Score (bit) 39.3
E-value 0.008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947235|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_E04, 5'
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4K526|CQ061_BUFBG UPF0451 protein C17orf61 homolog OS=Bufo b... 39 0.008
sp|Q2KI29|CQ061_BOVIN UPF0451 protein C17orf61 homolog OS=Bos ta... 34 0.26
sp|Q568J8|CQ061_DANRE UPF0451 protein C17orf61 homolog OS=Danio ... 33 0.44
sp|P50555|TNR1A_PIG Tumor necrosis factor receptor superfamily m... 32 1.0
sp|Q5F285|CQ061_MOUSE UPF0451 protein C17orf61 homolog OS=Mus mu... 32 1.3
sp|Q8N2U0|CQ061_HUMAN UPF0451 protein C17orf61 OS=Homo sapiens G... 32 1.7
sp|A6MN03|YCF1_ILLOL Putative membrane protein ycf1 OS=Illicium ... 30 6.4
sp|O19131|TNR1A_BOVIN Tumor necrosis factor receptor superfamily... 29 8.6

>sp|A4K526|CQ061_BUFBG UPF0451 protein C17orf61 homolog OS=Bufo bufo
gargarizans PE=3 SV=1
Length = 114

Score = 39.3 bits (90), Expect = 0.008
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3

Query: 189 YGAHMFK-PDNPAY-KEVWQTASLYHLVHTSALLAAPLTKRP 308
YGAH F+ D Y KE+++T + YH +H+ ALLA P +RP
Sbjct: 24 YGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRP 65


>sp|Q2KI29|CQ061_BOVIN UPF0451 protein C17orf61 homolog OS=Bos
taurus PE=3 SV=1
Length = 113

Score = 34.3 bits (77), Expect = 0.26
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3

Query: 186 TYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKRP 308
+YGAH + + KE++ + +H +H+ ALLA PL ++P
Sbjct: 24 SYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKP 64


>sp|Q568J8|CQ061_DANRE UPF0451 protein C17orf61 homolog OS=Danio
rerio GN=zgc:110256 PE=2 SV=1
Length = 114

Score = 33.5 bits (75), Expect = 0.44
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3

Query: 189 YGAHMFKPDNPA--YKEVWQTASLYHLVHTSALLAAPLTKRP 308
YGAH F+ + +E++ TA+ YH H+ ALL A ++P
Sbjct: 24 YGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKP 65


>sp|P50555|TNR1A_PIG Tumor necrosis factor receptor superfamily
member 1A OS=Sus scrofa GN=TNFRSF1A PE=2 SV=1
Length = 461

Score = 32.3 bits (72), Expect = 1.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2

Query: 288 QQEELMCVQGDTNLPFARPLCTLGCLA*TYGHHKCQGPVL 169
++ E +C QG + P R +C C TY H+ C GP L
Sbjct: 38 EKRESLCPQGKYSHPQNRSICCTKCHKGTYLHNDCLGPGL 77


>sp|Q5F285|CQ061_MOUSE UPF0451 protein C17orf61 homolog OS=Mus
musculus PE=2 SV=1
Length = 113

Score = 32.0 bits (71), Expect = 1.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3

Query: 186 TYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKRP 308
+YGAH + + KE++ A+ +H +H+ ALL P ++P
Sbjct: 24 SYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKP 64


>sp|Q8N2U0|CQ061_HUMAN UPF0451 protein C17orf61 OS=Homo sapiens
GN=C17orf61 PE=2 SV=1
Length = 113

Score = 31.6 bits (70), Expect = 1.7
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3

Query: 186 TYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKRP 308
+YGAH + + KE++ A+ +H +H+ ALL P ++P
Sbjct: 24 SYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKP 64


>sp|A6MN03|YCF1_ILLOL Putative membrane protein ycf1 OS=Illicium
oligandrum GN=ycf1 PE=3 SV=1
Length = 1882

Score = 29.6 bits (65), Expect = 6.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3

Query: 131 GIHPLSAAHTKWYRRVPKSWTLGLQQWEQRKHEN 30
G + + +HT+W R VP+ W G+ Q + K +
Sbjct: 1294 GHYQYNLSHTRWSRLVPRKWRNGVNQHHRIKQHH 1327


>sp|O19131|TNR1A_BOVIN Tumor necrosis factor receptor superfamily
member 1A OS=Bos taurus GN=TNFRSF1A PE=2 SV=1
Length = 471

Score = 29.3 bits (64), Expect = 8.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2

Query: 294 EVQQEELMCVQGDTNLPFARPLCTLGCLA*TYGHHKCQGP 175
++++ E C QG N P +C C TY ++ C GP
Sbjct: 36 DLEKRESPCPQGKYNHPQNSTICCTKCHKGTYLYNDCPGP 75


tr_hit_id A9NNT5
Definition tr|A9NNT5|A9NNT5_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 70
Score (bit) 86.7
E-value 5.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947235|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_E04, 5'
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NNT5|A9NNT5_PICSI Putative uncharacterized protein OS=Picea... 87 5e-16
tr|A9NQ61|A9NQ61_PICSI Putative uncharacterized protein OS=Picea... 86 9e-16
tr|Q9M5G7|Q9M5G7_9POAL Putative uncharacterized protein (Fragmen... 85 2e-15
tr|Q9M540|Q9M540_AGRCR Putative uncharacterized protein (Fragmen... 85 2e-15
tr|B6SJA8|B6SJA8_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15
tr|Q75LL8|Q75LL8_ORYSJ Os03g0751000 protein OS=Oryza sativa subs... 84 4e-15
tr|B8AJW9|B8AJW9_ORYSI Putative uncharacterized protein OS=Oryza... 84 4e-15
tr|Q9SI36|Q9SI36_ARATH Expressed protein OS=Arabidopsis thaliana... 84 5e-15
tr|B3H468|B3H468_ARATH Uncharacterized protein At2g04900.2 OS=Ar... 84 5e-15
tr|Q9M542|Q9M542_9POAL Putative uncharacterized protein (Fragmen... 83 6e-15
tr|Q9M541|Q9M541_9POAL Putative uncharacterized protein (Fragmen... 83 6e-15
tr|Q9M580|Q9M580_HORVU Putative uncharacterized protein (Fragmen... 83 8e-15
tr|B6TW29|B6TW29_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15
tr|B6SP30|B6SP30_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15
tr|Q8W470|Q8W470_ARATH Putative uncharacterized protein At2g0490... 82 1e-14
tr|Q9M543|Q9M543_PSAJU Putative uncharacterized protein (Fragmen... 81 3e-14
tr|A7PXA7|A7PXA7_VITVI Chromosome chr12 scaffold_36, whole genom... 76 1e-12
tr|A7PXA4|A7PXA4_VITVI Chromosome chr12 scaffold_36, whole genom... 76 1e-12
tr|A5B086|A5B086_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12
tr|A9RLJ5|A9RLJ5_PHYPA Predicted protein OS=Physcomitrella paten... 74 3e-12
tr|A9RKB6|A9RKB6_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11
tr|A9RKB5|A9RKB5_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|Q9M579|Q9M579_HORVU Putative uncharacterized protein (Fragmen... 53 7e-06
tr|A8IY12|A8IY12_CHLRE Predicted protein OS=Chlamydomonas reinha... 51 3e-05
tr|Q86F88|Q86F88_SCHJA Clone ZZZ67 mRNA sequence OS=Schistosoma ... 47 5e-04
tr|B7PMU8|B7PMU8_IXOSC Putative uncharacterized protein OS=Ixode... 47 5e-04
tr|Q5BY38|Q5BY38_SCHJA SJCHGC06658 protein (Fragment) OS=Schisto... 47 6e-04
tr|B6NBN6|B6NBN6_BRAFL Putative uncharacterized protein OS=Branc... 46 8e-04
tr|Q9U2Z9|Q9U2Z9_CAEEL Protein Y106G6H.8, confirmed by transcrip... 40 0.058
tr|A3AMR1|A3AMR1_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.17

>tr|A9NNT5|A9NNT5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 123

Score = 86.7 bits (213), Expect = 5e-16
Identities = 40/70 (57%), Positives = 45/70 (64%)
Frame = +3

Query: 105 VRS*ERMDSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALL 284
+R MD +W TYGAHMFKP NPAYKEVW TASLYHL+HT+A+L
Sbjct: 7 LRGVREMDPLVWHKVAGISGIAALGLGTYGAHMFKPANPAYKEVWHTASLYHLIHTAAML 66

Query: 285 AAPLTKRPHI 314
AAP TK PHI
Sbjct: 67 AAPATKHPHI 76


>tr|A9NQ61|A9NQ61_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 111

Score = 85.9 bits (211), Expect = 9e-16
Identities = 39/64 (60%), Positives = 43/64 (67%)
Frame = +3

Query: 123 MDSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTK 302
MD +W TYGAHMFKP NPAYKEVW TASLYHL+HT+A+LAAP TK
Sbjct: 1 MDPLVWHKVAGISGIAALGLGTYGAHMFKPANPAYKEVWHTASLYHLIHTAAMLAAPATK 60

Query: 303 RPHI 314
PHI
Sbjct: 61 HPHI 64


>tr|Q9M5G7|Q9M5G7_9POAL Putative uncharacterized protein (Fragment)
OS=Leymus cinereus PE=4 SV=1
Length = 108

Score = 84.7 bits (208), Expect = 2e-15
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +3

Query: 126 DSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKR 305
D LW TYGAHMF+P NP YKE+WQTASLYHLVHT+ALL AP+TKR
Sbjct: 8 DPMLWHKVAAVSGVAALGLGTYGAHMFRPQNPRYKEIWQTASLYHLVHTAALLGAPMTKR 67

Query: 306 PHI 314
P+I
Sbjct: 68 PNI 70


>tr|Q9M540|Q9M540_AGRCR Putative uncharacterized protein (Fragment)
OS=Agropyron cristatum PE=4 SV=1
Length = 108

Score = 84.7 bits (208), Expect = 2e-15
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +3

Query: 126 DSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKR 305
D LW TYGAHMF+P NP YKE+WQTASLYHLVHT+ALL AP+TKR
Sbjct: 8 DPMLWHKVAAVSGVAALGLGTYGAHMFRPQNPRYKEIWQTASLYHLVHTAALLGAPMTKR 67

Query: 306 PHI 314
P+I
Sbjct: 68 PNI 70


>tr|B6SJA8|B6SJA8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 115

Score = 84.3 bits (207), Expect = 3e-15
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +3

Query: 126 DSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKR 305
D LW TYGAHMF+P NPAYKEVW TASLYHLVHT+ALL AP+TKR
Sbjct: 6 DPMLWHKVAAVSGVAALGLGTYGAHMFRPKNPAYKEVWHTASLYHLVHTAALLGAPITKR 65

Query: 306 PHI 314
P++
Sbjct: 66 PNV 68


>tr|Q75LL8|Q75LL8_ORYSJ Os03g0751000 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0047E24.19 PE=4 SV=1
Length = 120

Score = 84.0 bits (206), Expect = 4e-15
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +3

Query: 126 DSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKR 305
D LW TYGAHMF+P NPAYKEVW TASLYHLVHT+ALL AP+TKR
Sbjct: 11 DPSLWHKVAAISGVAALGLGTYGAHMFRPKNPAYKEVWHTASLYHLVHTAALLGAPITKR 70

Query: 306 PHI 314
P +
Sbjct: 71 PDV 73


>tr|B8AJW9|B8AJW9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13526 PE=4 SV=1
Length = 120

Score = 84.0 bits (206), Expect = 4e-15
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +3

Query: 126 DSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKR 305
D LW TYGAHMF+P NPAYKEVW TASLYHLVHT+ALL AP+TKR
Sbjct: 11 DPSLWHKVAAISGVAALGLGTYGAHMFRPKNPAYKEVWHTASLYHLVHTAALLGAPITKR 70

Query: 306 PHI 314
P +
Sbjct: 71 PDV 73


>tr|Q9SI36|Q9SI36_ARATH Expressed protein OS=Arabidopsis thaliana
GN=At2g04900 PE=4 SV=2
Length = 128

Score = 83.6 bits (205), Expect = 5e-15
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +3

Query: 105 VRS*ERMDSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALL 284
+R MD ++W TYGAH+FKP+NP+YK+VWQTASLYHLVHT+AL+
Sbjct: 12 IRGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALV 71

Query: 285 AAPLTKRPHI 314
+AP TK P+I
Sbjct: 72 SAPSTKYPNI 81


>tr|B3H468|B3H468_ARATH Uncharacterized protein At2g04900.2
OS=Arabidopsis thaliana GN=At2g04900 PE=4 SV=1
Length = 98

Score = 83.6 bits (205), Expect = 5e-15
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +3

Query: 105 VRS*ERMDSKLWXXXXXXXXXXXXXXXTYGAHMFKPDNPAYKEVWQTASLYHLVHTSALL 284
+R MD ++W TYGAH+FKP+NP+YK+VWQTASLYHLVHT+AL+
Sbjct: 12 IRGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALV 71

Query: 285 AAPLTKRPHI 314
+AP TK P+I
Sbjct: 72 SAPSTKYPNI 81


>tr|Q9M542|Q9M542_9POAL Putative uncharacterized protein (Fragment)
OS=Dasypyrum villosum PE=4 SV=1
Length = 93

Score = 83.2 bits (204), Expect = 6e-15
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = +3

Query: 186 TYGAHMFKPDNPAYKEVWQTASLYHLVHTSALLAAPLTKRPHI 314
TYGAHMF+P NP YKE+WQTASLYHLVHT+ALL AP+TKRP+I
Sbjct: 19 TYGAHMFRPQNPRYKEIWQTASLYHLVHTAALLGAPMTKRPNI 61