DK947100
Clone id YMU02A01NGRL0014_M18
Library
Length 287
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_M18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCTAGAAAAAGATAAGCAAGCTATGATCTTTCCGGGTTCTCTGTTGCTGTTGAAGATGGA
CTAGTCTTGCCCCCTCCCCTCAATGATTGTTTTTGTTGGATGTATTTGTTCTATTCGGTC
TATCCCGCTGTCAGCTTTCTGAAAGTCTGCTTATACTTTGTCCATAGTACTGCTGTACTG
GACTACGTCTGAATACAAAGTTAAGCCTCTTAATAAAAAAAACAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q55A09
Definition sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum
Align length 36
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947100|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_M18, 5'
(211 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase D... 30 3.7

>sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase
DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254
PE=3 SV=1
Length = 1331

Score = 30.0 bits (66), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1

Query: 190 RRSPVQQYYGQSISRLSES*QRDRPNRTNTSNKNNH 83
R+S +YY Q ++ L+ S + N +NT+N NN+
Sbjct: 496 RKSLPPEYYNQYLNFLAHSNNNNNNNNSNTNNNNNN 531


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947100|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_M18, 5'
(211 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******