DK947046 |
Clone id |
YMU02A01NGRL0014_J15 |
Library |
YMU02 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_J15. 5' end sequence. |
Accession |
DK947046 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL439Contig1 |
Sequence |
GCGTGTGCTACTGAAGGCGTTTGGTGCTGAGCTGGTACTGACCGACCCTGCCAGAGGAAT GAAGGGAGCGGTGCAAAAGGCTGAAGAGATTGTGAACAAGACACCCAATGCATACATGCT TCAGCAGTTTGAAAACCCGGCAAATCCAAAGGTTCATTTTGAAACCACTGGTCCTGAAAT ATGGGAAGACACGGCTGGCAAGATTGATATCCTAATTTCTGGTATTGGAACCGGTGGGAC AGTTACTGGTGCTGGACGTTTTTTGAAAGGGAAAAATCCAAATATAAAGATCATTGGTAT AGAGCCAACAGAAAGCAGTGTCTTGGCTGGAGGAAAACCAGGTCCCCACAAGATTCAAGG AATCGGTGCAGGTTTTATCCCTGGGATTTTGGATGTTGACATTCTTGATGAGGTCTTGCA GGTCTCTAGCAATGAAGCAATTGAAATGGCCAAACAACTTGCTTTGAAGGAGGGCCTTTT GGTTGGCATCTCTTCAGGAGCAGCCGCAGTTGCTGCTATTCAGGTTGCCAAGCGGCCTGA AAATGCTGGCAAGCTTATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81155 |
Definition |
sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum |
Align length |
186 |
Score (bit) |
241.0 |
E-value |
2.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947046|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0014_J15, 5' (559 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 241 2e-63 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 239 9e-63 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 238 1e-62 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 235 1e-61 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 235 1e-61 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 234 2e-61 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 234 2e-61 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 234 3e-61 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 232 8e-61 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 227 3e-59 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 225 1e-58 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 225 1e-58 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 224 3e-58 sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 219 9e-57 sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 216 8e-56 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 177 3e-44 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 174 3e-43 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 169 7e-42 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 169 1e-41 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 169 1e-41 sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimuri... 159 7e-39 sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=... 159 7e-39 sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis... 157 4e-38 sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (st... 156 6e-38 sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O15... 156 6e-38 sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus... 154 3e-37 sp|P45040|CYSK_HAEIN Cysteine synthase OS=Haemophilus influenzae... 152 1e-36 sp|P57171|CYSK_BUCAI Cysteine synthase OS=Buchnera aphidicola su... 150 4e-36 sp|Q8KA48|CYSK_BUCAP Cysteine synthase OS=Buchnera aphidicola su... 142 1e-33 sp|P37887|CYSK_BACSU Serine-dependent cysteine synthase OS=Bacil... 140 3e-33
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 241 bits (615), Expect = 2e-63 Identities = 120/186 (64%), Positives = 141/186 (75%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 RV+LKAFGAELVLTDPA+GMKGAV KAEEI+N TP+AY+LQQF+NPANPK+H+ETTGPEI Sbjct: 170 RVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEI 229
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 WEDT GKIDIL++ RFL EPTES+VL+GGKPGPHKIQG Sbjct: 230 WEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQG 289
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIPG LD D++DEV+++SS+EA+E A+ LAL+EGLL QV KRPE Sbjct: 290 IGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPE 349
Query: 542 NAGKLI 559 NAGKLI Sbjct: 350 NAGKLI 355
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 239 bits (609), Expect = 9e-63 Identities = 119/186 (63%), Positives = 141/186 (75%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R +L+AFGAEL+LTDPA+GMKGAVQKAEEI +KTPN+Y+LQQFENPANPKVH+ETTGPEI Sbjct: 109 RTILRAFGAELILTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEI 168
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+ T GKIDI +S ++L EP ES+VL+GGKPGPHKIQG Sbjct: 169 WKGTGGKIDIFVSGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSGGKPGPHKIQG 228
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 +GAGFIPG+LDV+I+DEV+Q+SS E+IEMAK LALKEGLL +VAKRPE Sbjct: 229 LGAGFIPGVLDVNIIDEVVQISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPE 288
Query: 542 NAGKLI 559 NAGKLI Sbjct: 289 NAGKLI 294
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 238 bits (607), Expect = 1e-62 Identities = 114/186 (61%), Positives = 141/186 (75%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 RV+LKAFGAELVLTDPA+GMKGAV+KAEEI+ KTP++YMLQQF+NPANPK+H+ETTGPEI Sbjct: 168 RVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEI 227
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 WEDT GK+DI ++ R+L EPTES++L+GGKPGPHKIQG Sbjct: 228 WEDTKGKVDIFVAGIGTGGTISGVGRYLKERNPGVQVIGIEPTESNILSGGKPGPHKIQG 287
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 +GAGF+P LD+ ++DEV++VSS EA+EMAKQLA+KEGLL ++ KRPE Sbjct: 288 LGAGFVPSNLDLGVMDEVIEVSSEEAVEMAKQLAMKEGLLVGISSGAAAAAAVRIGKRPE 347
Query: 542 NAGKLI 559 NAGKLI Sbjct: 348 NAGKLI 353
>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2 SV=1 Length = 325
Score = 235 bits (600), Expect = 1e-61 Identities = 118/186 (63%), Positives = 138/186 (74%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R +L+AFGAELVLTDPARGMKGAVQKAEEI KTPN+Y+LQQFENPANPK+H+ETTGPEI Sbjct: 109 RTILRAFGAELVLTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEI 168
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W + GKID L+S ++L EP ES++L+GGKPGPHKIQG Sbjct: 169 WRGSGGKIDALVSGIGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSGGKPGPHKIQG 228
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIPG+LDV++LDEV+QVSS E+IE AK LALKEGLL ++AKRPE Sbjct: 229 IGAGFIPGVLDVNLLDEVIQVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPE 288
Query: 542 NAGKLI 559 NAGKLI Sbjct: 289 NAGKLI 294
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 235 bits (599), Expect = 1e-61 Identities = 114/186 (61%), Positives = 141/186 (75%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R++LKAFGAELVLTDP GMKGA+QKA+E+ K PN+Y+LQQFENPANPK+H+ETTGPEI Sbjct: 109 RIILKAFGAELVLTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEI 168
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+ TAGK+DIL+S ++L EPTES++L+GG+PGPHKIQG Sbjct: 169 WKATAGKVDILVSGIGTGGTVTGTGKYLKEQNPEIKIYGVEPTESAILSGGRPGPHKIQG 228
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGF+PG+LDV++LDEV+QVSS+EAI MAKQLALKEGLL +VA+RPE Sbjct: 229 IGAGFVPGVLDVNLLDEVVQVSSDEAISMAKQLALKEGLLVGISSGAAAVAAIRVAQRPE 288
Query: 542 NAGKLI 559 N GKL+ Sbjct: 289 NKGKLV 294
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 Length = 325
Score = 234 bits (598), Expect = 2e-61 Identities = 121/185 (65%), Positives = 137/185 (74%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R++LKAFGAELVLTDP GMKGAV+KAEEI KTPN+Y+LQQFENPANPK+H+ETTGPEI Sbjct: 109 RIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEI 168
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+ TAGKID L+S R+L EP ES+VL GGKPGPHKIQG Sbjct: 169 WKATAGKIDGLVSGIGTGGTITGTGRYLREQNPNVKLYGVEPVESAVLNGGKPGPHKIQG 228
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIPG+LDVD+LDE LQVSS+EAIE AK LALKEGLL ++AKRPE Sbjct: 229 IGAGFIPGVLDVDLLDETLQVSSDEAIETAKALALKEGLLVGISSGAAAAAAVRLAKRPE 288
Query: 542 NAGKL 556 NAGKL Sbjct: 289 NAGKL 293
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 234 bits (598), Expect = 2e-61 Identities = 117/186 (62%), Positives = 139/186 (74%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 RVLL+AFGAELVLT+PA+GM GA+QKAEEI+ KTPN+YMLQQF+NPANPK+H+ETTGPEI Sbjct: 176 RVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEI 235
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 WEDT GKIDIL++ RF+ EPTES++L+GGKPGPHKIQG Sbjct: 236 WEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQG 295
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGF+P LD+ I+DE + +SS EAIE +KQLAL+EGLL QVAKRPE Sbjct: 296 IGAGFVPKNLDLAIVDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPE 355
Query: 542 NAGKLI 559 NAGKLI Sbjct: 356 NAGKLI 361
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 234 bits (596), Expect = 3e-61 Identities = 118/186 (63%), Positives = 136/186 (73%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 RVLLKAFGAELVLTDPA+GM GAVQKAEEI+ TP+AYMLQQF+NPANPK+H+ETTGPEI Sbjct: 214 RVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEI 273
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+DT GK+DI ++ RF+ EPTES +L+GGKPGPHKIQG Sbjct: 274 WDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQG 333
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIP LD I+DEV+ +SS EAIE AKQLALKEGL+ +VAKRPE Sbjct: 334 IGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE 393
Query: 542 NAGKLI 559 NAGKLI Sbjct: 394 NAGKLI 399
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Length = 325
Score = 232 bits (592), Expect = 8e-61 Identities = 116/185 (62%), Positives = 137/185 (74%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R++LKAFGAEL+LTDP GMKGAVQKAEE+ KTPN+Y+LQQFEN ANPK+H+ETTGPEI Sbjct: 110 RIILKAFGAELILTDPLLGMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEI 169
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+ T GKID L+S ++L EPTES++L GGKPGPHKIQG Sbjct: 170 WKGTGGKIDGLVSGIGTGGTITGTGKYLQEQNPNIKLYGVEPTESAILNGGKPGPHKIQG 229
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIPG+LDVDI+DE +QVSS+E+IEMAK LALKEGLL +VA+RPE Sbjct: 230 IGAGFIPGVLDVDIIDETIQVSSDESIEMAKSLALKEGLLVGISSGAAAAAAIKVAQRPE 289
Query: 542 NAGKL 556 NAGKL Sbjct: 290 NAGKL 294
>sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2 Length = 322
Score = 227 bits (578), Expect = 3e-59 Identities = 111/185 (60%), Positives = 137/185 (74%) Frame = +2
Query: 2 RVLLKAFGAELVLTDPARGMKGAVQKAEEIVNKTPNAYMLQQFENPANPKVHFETTGPEI 181 R++L AFG ELVLTDPA+GMKGA+ KAEEI+ KTPN YMLQQFENPANPK+H+ETTGPEI Sbjct: 106 RIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEI 165
Query: 182 WEDTAGKIDILISXXXXXXXXXXXXRFLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQG 361 W+ T GKID +S ++L EP ES++L+GGKPGPHKIQG Sbjct: 166 WKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQG 225
Query: 362 IGAGFIPGILDVDILDEVLQVSSNEAIEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPE 541 IGAGFIP +L+VD++DEV+QVSS+E+I+MA+QLALKEGLL ++A+RPE Sbjct: 226 IGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE 285
Query: 542 NAGKL 556 NAGKL Sbjct: 286 NAGKL 290
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RMD3 |
Definition |
tr|A9RMD3|A9RMD3_PHYPA Cysteine synthase OS=Physcomitrella patens subsp. patens |
Align length |
186 |
Score (bit) |
264.0 |
E-value |
3.0e-69 |
Report |
|