DK947025
Clone id YMU02A01NGRL0014_I11
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_I11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TATGCGTCCTTATCTTATGAGATATTGCAAAGTAAAAGGAGCTCCAATTAGGTTTAGCCT
TGTAAATGATGCCACCTCGGAATAATTGAGTAGCTTCACATTTTGTATAATTATCTTTGA
AAGCATTTTAGTTGGGTGACATTTATGACATGTTGGATACCCATGCATCACCTGTATACA
TTGCCAATGCTAACTGAAAGTTGTGTGGTTTCCATGGGTGCAGGTGAGGGTTACCTTCTC
AACTATGGTTTTCAAAGTTCCCTAGCTTGAAGATGGCGGACTTATCGTTCTTTTGGCTCT
TAAATCTCTTAAACTTGTGTGTACAGTCTGTTCTATACTATGAATGGGAGTTATACCACC
TTTTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q660A6
Definition sp|Q660A6|GCP_BORGA Probable O-sialoglycoprotein endopeptidase OS=Borrelia garinii
Align length 45
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947025|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_I11, 5'
(369 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q660A6|GCP_BORGA Probable O-sialoglycoprotein endopeptidase O... 32 1.3
sp|O51710|GCP_BORBU Probable O-sialoglycoprotein endopeptidase O... 32 1.3
sp|Q4LBB9|OCTB2_DROME Octopamine receptor beta-2R OS=Drosophila ... 31 2.2
sp|Q0SM86|GCP_BORAP Probable O-sialoglycoprotein endopeptidase O... 30 2.9
sp|Q9ZE28|Y120_RICPR Uncharacterized protein RP120 OS=Rickettsia... 29 8.3

>sp|Q660A6|GCP_BORGA Probable O-sialoglycoprotein endopeptidase
OS=Borrelia garinii GN=gcp PE=3 SV=1
Length = 338

Score = 31.6 bits (70), Expect = 1.3
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = -3

Query: 364 KRWYN-SHS*YRTDCTHKFKRFKSQ-----KNDKSAIFKLGNFEN 248
+ WY+ S+S +T C H+ ++FKS+ KN+ +A F+ FEN
Sbjct: 204 ENWYDFSYSGLKTACIHQLEKFKSKDNPTTKNNIAASFQKAAFEN 248


>sp|O51710|GCP_BORBU Probable O-sialoglycoprotein endopeptidase
OS=Borrelia burgdorferi GN=gcp PE=3 SV=1
Length = 346

Score = 31.6 bits (70), Expect = 1.3
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = -3

Query: 364 KRWYN-SHS*YRTDCTHKFKRFKSQ-----KNDKSAIFKLGNFEN 248
+ WY+ S+S +T C H+ ++FKS+ KN+ +A F+ FEN
Sbjct: 204 ENWYDFSYSGLKTACIHQLEKFKSKDNPTTKNNIAASFQKAAFEN 248


>sp|Q4LBB9|OCTB2_DROME Octopamine receptor beta-2R OS=Drosophila
melanogaster GN=Octbeta2R PE=1 SV=2
Length = 536

Score = 30.8 bits (68), Expect = 2.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1

Query: 139 TFMTCWIPMHHLYTLPMLTESCVV 210
TF+ CW+P YTL M E C V
Sbjct: 419 TFILCWLPFFLWYTLSMTCEECQV 442


>sp|Q0SM86|GCP_BORAP Probable O-sialoglycoprotein endopeptidase
OS=Borrelia afzelii (strain PKo) GN=gcp PE=3 SV=1
Length = 346

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = -3

Query: 364 KRWYN-SHS*YRTDCTHKFKRFKSQ-----KNDKSAIFKLGNFEN 248
+ WY+ S+S +T C H+ ++FK++ KN+ +A F+ FEN
Sbjct: 204 ENWYDFSYSGLKTACIHQLEKFKNKDNPTTKNNIAASFQKAAFEN 248


>sp|Q9ZE28|Y120_RICPR Uncharacterized protein RP120 OS=Rickettsia
prowazekii GN=RP120 PE=4 SV=1
Length = 354

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1

Query: 165 HGYPTCHKCHPTKMLSKIIIQNVKLLNYS 79
H Y C P K+LSK I + K+LNYS
Sbjct: 114 HDYRDLLYCGPAKILSKNIKSHCKVLNYS 142


tr_hit_id A7RWH2
Definition tr|A7RWH2|A7RWH2_NEMVE Predicted protein OS=Nematostella vectensis
Align length 83
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947025|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_I11, 5'
(369 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7RWH2|A7RWH2_NEMVE Predicted protein OS=Nematostella vectens... 33 5.4

>tr|A7RWH2|A7RWH2_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g241170 PE=4 SV=1
Length = 329

Score = 33.5 bits (75), Expect = 5.4
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -1

Query: 336 IEQTVHTSLRDLRAKRTISP----PSSS*GTLKTIVEKVTLTCTHGNHTTFS*HWQCIQV 169
+ Q++ T++ DL K I P SS K + + + C H + T H+ C
Sbjct: 29 VGQSLPTTIDDLYEKVDIRDAGIKPGSSYDDYKAPMVR-GINCKHYSRDTCLMHFPCCPK 87

Query: 168 MHGYPTCHKCHPTKMLSKIIIQN 100
H YP CHKCH M + + N
Sbjct: 88 DHFYP-CHKCHNEMMEDETLWNN 109