DK946981
Clone id YMU02A01NGRL0014_G04
Library
Length 265
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0014_G04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GATTCCTAGCAAGACATTAGATAATATCTGTATCACCGATGTTATTTTCGTTGCTCTGAT
CTTGGTTTTACTCATTGCGTTGGTGGTGTTCTGCTATGTCTGGTTTTATCTTTTTTTTGT
ATGGTTGATGACCTTTTTCCTCCTAGACATTGTCTCTCAAACCTTATGTTGCCGTGCCCT
TGTACTCAGTAGATGCAATACGTGTGAGCTTCTTACTGCTCACAACACGTTTTTGACGGA
AGTGAGTGTACTCACGTTGACGGTC
■■Homology search results ■■ -
sp_hit_id Q0ZME7
Definition sp|Q0ZME7|SPIKE_CVHN5 Spike glycoprotein OS=Human coronavirus HKU1 (isolate N5)
Align length 52
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946981|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G04, 5'
(265 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0ZME7|SPIKE_CVHN5 Spike glycoprotein OS=Human coronavirus HK... 29 6.5
sp|Q14EB0|SPIKE_CVHN2 Spike glycoprotein OS=Human coronavirus HK... 29 6.5
sp|Q5MQD0|SPIKE_CVHN1 Spike glycoprotein OS=Human coronavirus HK... 29 8.5

>sp|Q0ZME7|SPIKE_CVHN5 Spike glycoprotein OS=Human coronavirus HKU1
(isolate N5) GN=S PE=3 SV=1
Length = 1351

Score = 29.3 bits (64), Expect = 6.5
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2

Query: 95 YVWFYLFFVWLMTFFLLDIVSQTLCCRALVLSRC-NTCELLTAHNTFLTEVS 247
Y+W + ++++ +L + C + S+C N C+ HN F+ + S
Sbjct: 1297 YIWLLIVILFIIFLMILFFICCCTGCGSACFSKCHNCCDEYGGHNDFVIKAS 1348


>sp|Q14EB0|SPIKE_CVHN2 Spike glycoprotein OS=Human coronavirus HKU1
(isolate N2) GN=S PE=3 SV=1
Length = 1351

Score = 29.3 bits (64), Expect = 6.5
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2

Query: 95 YVWFYLFFVWLMTFFLLDIVSQTLCCRALVLSRC-NTCELLTAHNTFLTEVS 247
Y+W + ++++ +L + C + S+C N C+ HN F+ + S
Sbjct: 1297 YIWLLIVILFIIFLMILFFICCCTGCGSACFSKCHNCCDEYGGHNDFVIKAS 1348


>sp|Q5MQD0|SPIKE_CVHN1 Spike glycoprotein OS=Human coronavirus HKU1
(isolate N1) GN=S PE=3 SV=1
Length = 1356

Score = 28.9 bits (63), Expect = 8.5
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2

Query: 95 YVWFYLFFVWLMTFFLLDIVSQTLCCRALVLSRC-NTCELLTAHNTFLTEVS 247
YVW + F +++ LL + C + S+C N C+ H+ F+ + S
Sbjct: 1302 YVWLLISFSFIIFLVLLFFICCCTGCGSACFSKCHNCCDEYGGHHDFVIKTS 1353


tr_hit_id A7QDF0
Definition tr|A7QDF0|A7QDF0_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera
Align length 34
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946981|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0014_G04, 5'
(265 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QDF0|A7QDF0_VITVI Chromosome chr10 scaffold_81, whole genom... 34 3.2
tr|A5ANF5|A5ANF5_VITVI Putative uncharacterized protein OS=Vitis... 34 3.2
tr|A5ZD56|A5ZD56_9BACE Putative uncharacterized protein OS=Bacte... 33 5.4

>tr|A7QDF0|A7QDF0_VITVI Chromosome chr10 scaffold_81, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00035814001
PE=4 SV=1
Length = 480

Score = 34.3 bits (77), Expect = 3.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2

Query: 95 YVWFYLFFVWL-MTFFLLDIVSQTLCCRALVLSR 193
+ W F+W+ MT FL+++V +CCR ++L R
Sbjct: 426 WYWKKTVFIWISMTVFLMELVFTLICCRPIILPR 459


>tr|A5ANF5|A5ANF5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042996 PE=4 SV=1
Length = 523

Score = 34.3 bits (77), Expect = 3.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2

Query: 95 YVWFYLFFVWL-MTFFLLDIVSQTLCCRALVLSR 193
+ W F+W+ MT FL+++V +CCR ++L R
Sbjct: 469 WYWKKTVFIWISMTVFLMELVFTLICCRPIILPR 502


>tr|A5ZD56|A5ZD56_9BACE Putative uncharacterized protein
OS=Bacteroides caccae ATCC 43185 GN=BACCAC_00806 PE=4
SV=1
Length = 713

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2

Query: 95 YVWFYLFFVWLMTFFLLDIVSQTLCCRALVLSRCNTCELLTAHNTFLTEVSVLTL 259
++ F +FFV +M + L+ I + + + + + +CN N FL E VL +
Sbjct: 225 FLGFAVFFVAIMNYMLISIATLSRRAKGVGVHKCNGASSTNIFNMFLVETGVLVI 279