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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946423
Clone id YMU02A01NGRL0012_J06
Library
Length 194
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_J06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GAAGACTCCTCAGTTTTTCTTTTTTGTACTTGAATTGCTTTTTTGCTGCTGCTCTCATGG
CTTCCGTCCAGTTGACGGAAATTTGACTAATTACCACTCCTATCTGGTGTCTTAGGTGTA
CCTTTCATTGCTTGTGAGTTTTCGATCACCACACTAGTGTTGCTTATGATATCTGAATTG
AACCATGTGGTCTT
■■Homology search results ■■ -
sp_hit_id O70129
Definition sp|O70129|C5AR_CAVPO C5a anaphylatoxin chemotactic receptor OS=Cavia porcellus
Align length 39
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946423|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_J06, 5'
         (194 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O70129|C5AR_CAVPO C5a anaphylatoxin chemotactic receptor OS=C...    32   1.3  

>sp|O70129|C5AR_CAVPO C5a anaphylatoxin chemotactic receptor
           OS=Cavia porcellus GN=C5AR1 PE=2 SV=1
          Length = 345

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 18  SFLYLNCFFAAALMASVQLTEI*LITTPIWCLRCTFHCL 134
           S + LN + +  L+A++    + L+ +PIWC R    CL
Sbjct: 109 SLILLNMYTSILLLATISADRLLLVLSPIWCQRFRGGCL 147
tr_hit_id A6RDJ7
Definition tr|A6RDJ7|A6RDJ7_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24)
Align length 54
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946423|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_J06, 5'
         (194 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6RDJ7|A6RDJ7_AJECN Predicted protein OS=Ajellomyces capsulat...    33   9.3  

>tr|A6RDJ7|A6RDJ7_AJECN Predicted protein OS=Ajellomyces capsulata
           (strain NAm1 / WU24) GN=HCAG_07705 PE=4 SV=1
          Length = 429

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -1

Query: 176 SDIISNTSVVIENSQAMKGTPKTPDRSGN*SNFRQLDGSHESSSKKAIQVQKRK 15
           S I+  TS++I+ S A   TP  P  + N SN  QL     S+S  +++ Q  K
Sbjct: 6   SSILEATSIIIDQSNAALSTPLCPPANTNSSNSAQLSLPLLSTSAASLKAQTTK 59