DK946400
Clone id YMU02A01NGRL0012_I02
Library
Length 305
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_I02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCTTGAAAATGAGTTGTGCAAGCGGGTTATTCAATCAGAGTGTGCATGAGGGCCTCAGCT
GTGTTTTGGAGTTCGGGTAAAGCCTCCTTGGCTCATATGTGGCAAGAGGGACTGGTCTTC
ATCCAGAAAATGTTATTTCCAATACCTGCCAGCCACCCTTCCTTAGAGGAGTGTTAATAC
TTTGTCGTGTAGGAGTGTATTGTTTTGCTGAAATGTCTGATGGCTTGATCCTCTGCTTGG
TAACTAAGGAGATTCTTCTGAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
■■Homology search results ■■ -
sp_hit_id Q5L2C9
Definition sp|Q5L2C9|Y616_GEOKA Putative metal-dependent hydrolase GK0616 OS=Geobacillus kaustophilus
Align length 30
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946400|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_I02, 5'
(260 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5L2C9|Y616_GEOKA Putative metal-dependent hydrolase GK0616 O... 29 8.2
sp|Q6YXY2|HACL1_ORYSJ Probable histone acetyltransferase HAC-lik... 29 8.2

>sp|Q5L2C9|Y616_GEOKA Putative metal-dependent hydrolase GK0616
OS=Geobacillus kaustophilus GN=GK0616 PE=3 SV=1
Length = 178

Score = 28.9 bits (63), Expect = 8.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2

Query: 223 PSDISAKQYTPTRQSINTPLRKGGWQVLEI 134
PSD+ + +NTP R+GGW V ++
Sbjct: 36 PSDLRTAVSGLNDEQLNTPYREGGWTVAQV 65


>sp|Q6YXY2|HACL1_ORYSJ Probable histone acetyltransferase HAC-like 1
OS=Oryza sativa subsp. japonica GN=Os02g0137500 PE=3 SV=2
Length = 1668

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3

Query: 117 LHPENVISNTCQPPFLRGVLILCRVGVYCFAEMSDGLILC 236
+H S +CQ P R V L R G+ C S G +LC
Sbjct: 1568 VHASTCRSGSCQYPNCRKVKGLFRHGMQCKTRASGGCVLC 1607


tr_hit_id Q8TKD2
Definition tr|Q8TKD2|Q8TKD2_METAC Predicted protein OS=Methanosarcina acetivorans
Align length 48
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946400|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_I02, 5'
(260 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8TKD2|Q8TKD2_METAC Predicted protein OS=Methanosarcina aceti... 34 3.2

>tr|Q8TKD2|Q8TKD2_METAC Predicted protein OS=Methanosarcina
acetivorans GN=MA_3476 PE=4 SV=1
Length = 151

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3

Query: 90 GSYVARGTGLHPENVISNTCQPPFLRGVLILCRVG---VYCFAEMSDG 224
G + +G GL PEN I+ PP L G L+L +G +Y E+S+G
Sbjct: 24 GLQILKGAGLLPENFITANLLPPELAGGLVLVVIGAVYLYGTVELSNG 71