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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946374
Clone id YMU02A01NGRL0012_G18
Library
Length 296
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_G18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TTGGAGTTTGTTTTGGGCCTTCGGAAAATGCTTTGTCCCGAGTGAAAGGTGGCGTGATAC
CTTTCGTATGATGAAGGAATGTCCTGATTGTTTTTGGTCTCACTTCTTAAAAGATGTGTC
CATGTGTGGGACATGTACTTTGGAATGTCCTGATCGTTGTTGGTCTCACGTCTTAATAGA
CGTGTCCATATTTTGTAGTATGCTTTTCTCTGATGTTGCGTGCACTATTGTAAGTTTGGA
ATGTGAAATCAAACTGATTCTTTACAGAANAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6ZT07
Definition sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens
Align length 55
Score (bit) 32.3
E-value 0.75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946374|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_G18, 5'
         (251 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapien...    32   0.75 
sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculu...    32   1.3  
sp|Q8BFU0|RSPO2_MOUSE R-spondin-2 OS=Mus musculus GN=Rspo2 PE=1 ...    32   1.3  
sp|Q6UXX9|RSPO2_HUMAN R-spondin-2 OS=Homo sapiens GN=RSPO2 PE=2 ...    32   1.3  
sp|P0C6X9|R1AB_CVMA5 Replicase polyprotein 1ab OS=Murine coronav...    30   2.8  
sp|P0C6X8|R1AB_CVM2 Replicase polyprotein 1ab OS=Murine coronavi...    30   2.8  
sp|P78312|CD008_HUMAN Uncharacterized protein C4orf8 OS=Homo sap...    30   3.7  

>sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens
            GN=TBC1D9 PE=1 SV=2
          Length = 1266

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 196  QRKAYYKIWTRLLRRETNNDQDIPKYMSHTWTHLLRSETKNNQDIPSSYERYHAT 32
            + + Y ++WT   + ++ N +D+PK     +  L ++      + P+  E YHAT
Sbjct: 999  ENRNYLRLWTPENKSKSKNAKDLPKLNQGQFIELCKTMYNMFSEDPNEQELYHAT 1053


>sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculus
            GN=Tbc1d9 PE=2 SV=2
          Length = 1264

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -2

Query: 196  QRKAYYKIWTRLLRRETNNDQDIPKYMSHTWTHLLRSETKNNQDIPSSYERYHAT 32
            + + Y K+WT   + ++   +D+PK     +  L ++      + P+  E YHAT
Sbjct: 999  ENRNYLKLWTAENKSKSKTAKDLPKLNQGQFIELCKTMYNMFSEDPNEQELYHAT 1053


>sp|Q8BFU0|RSPO2_MOUSE R-spondin-2 OS=Mus musculus GN=Rspo2 PE=1
           SV=1
          Length = 243

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 16  FVPSERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWS 150
           F+  E  R     +  CP  ++ H   D++ C  C +E  D C+S
Sbjct: 62  FLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFS 106


>sp|Q6UXX9|RSPO2_HUMAN R-spondin-2 OS=Homo sapiens GN=RSPO2 PE=2
           SV=2
          Length = 243

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 16  FVPSERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWS 150
           F+  E  R     +  CP  ++ H   D++ C  C +E  D C+S
Sbjct: 62  FLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFS 106


>sp|P0C6X9|R1AB_CVMA5 Replicase polyprotein 1ab OS=Murine coronavirus
            (strain A59) GN=rep PE=1 SV=1
          Length = 7176

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 136  DRCWSHVLIDV---SIFCSMLFSDVACTIVSLEC 228
            D CWSHVL D    S+FCS  +    C    L+C
Sbjct: 6581 DVCWSHVLWDYAKDSVFCSSTYK--VCKYTDLQC 6612


>sp|P0C6X8|R1AB_CVM2 Replicase polyprotein 1ab OS=Murine coronavirus
            (strain 2) GN=rep PE=3 SV=1
          Length = 7124

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 136  DRCWSHVLIDV---SIFCSMLFSDVACTIVSLEC 228
            D CWSHVL D    S+FCS  +    C    L+C
Sbjct: 6529 DVCWSHVLWDYAKDSVFCSSTYK--VCKYTDLQC 6560


>sp|P78312|CD008_HUMAN Uncharacterized protein C4orf8 OS=Homo
           sapiens GN=C4orf8 PE=1 SV=2
          Length = 1265

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 108 HGHIF*EVRPKTIRTFLHHTKGITPPFTRDKA 13
           HGH+     P   R  +H T   TPPFT  KA
Sbjct: 456 HGHVPLHTVPHLPRPLIHPTLYATPPFTHSKA 487
tr_hit_id A4QQQ6
Definition tr|A4QQQ6|A4QQQ6_MAGGR Putative uncharacterized protein OS=Magnaporthe grisea
Align length 46
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946374|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0012_G18, 5'
         (251 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4QQQ6|A4QQQ6_MAGGR Putative uncharacterized protein OS=Magna...    36   0.85 
tr|A9ZPI7|A9ZPI7_9PEZI Pol polyprotein OS=Magnaporthe oryzae GN=...    36   1.1  
tr|A4RPL6|A4RPL6_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|A4R439|A4R439_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|A4QZT8|A4QZT8_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|A4QY94|A4QY94_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|A4QY92|A4QY92_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|A4QQG5|A4QQG5_MAGGR Putative uncharacterized protein OS=Magna...    36   1.1  
tr|B3ECI9|B3ECI9_CHLL2 4Fe-4S ferredoxin iron-sulfur binding dom...    35   1.4  
tr|Q1DW98|Q1DW98_COCIM Predicted protein OS=Coccidioides immitis...    33   7.2  

>tr|A4QQQ6|A4QQQ6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_03749 PE=4 SV=1
          Length = 1166

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28  ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
           +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 725 DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPKRCWQHVMVD 770


>tr|A9ZPI7|A9ZPI7_9PEZI Pol polyprotein OS=Magnaporthe oryzae GN=pol
            PE=4 SV=1
          Length = 1305

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28   ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
            +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 864  DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 909


>tr|A4RPL6|A4RPL6_MAGGR Putative uncharacterized protein
            OS=Magnaporthe grisea GN=MGG_13115 PE=4 SV=1
          Length = 1305

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28   ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
            +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 864  DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 909


>tr|A4R439|A4R439_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_12066 PE=4 SV=1
          Length = 1087

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28  ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
           +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 646 DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 691


>tr|A4QZT8|A4QZT8_MAGGR Putative uncharacterized protein
            OS=Magnaporthe grisea GN=MGG_13690 PE=4 SV=1
          Length = 1348

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28   ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
            +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 907  DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 952


>tr|A4QY94|A4QY94_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_08510 PE=4 SV=1
          Length = 1236

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28  ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
           +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 795 DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 840


>tr|A4QY92|A4QY92_MAGGR Putative uncharacterized protein
            OS=Magnaporthe grisea GN=MGG_08508 PE=4 SV=1
          Length = 1401

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28   ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
            +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 1031 DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 1076


>tr|A4QQG5|A4QQG5_MAGGR Putative uncharacterized protein
            OS=Magnaporthe grisea GN=MGG_10284 PE=4 SV=1
          Length = 1729

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 28   ERWRDTFRMMKECPDCFWSHFLKDVSMCGTCTLECPDRCWSHVLID 165
            +R RD  R +K C +C  +    D +      LE P RCW HV++D
Sbjct: 1288 DRNRDVKRYIKNCRECQRNKVRHDKTPGLLHPLEIPRRCWQHVMVD 1333


>tr|B3ECI9|B3ECI9_CHLL2 4Fe-4S ferredoxin iron-sulfur binding domain
           protein OS=Chlorobium limicola (strain DSM 245 / NBRC
           103803) GN=Clim_1197 PE=4 SV=1
          Length = 337

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +1

Query: 19  VPSERWRDTFRMMKECPDCFWSHFLKDVSM----CGTCTLECP 135
           VP +   D  R   + P+ F SHF K++SM    CGTCT  CP
Sbjct: 200 VPIKFDLDVCREWLQNPENFESHFWKEISMRCIGCGTCTFLCP 242


>tr|Q1DW98|Q1DW98_COCIM Predicted protein OS=Coccidioides immitis
           GN=CIMG_05415 PE=4 SV=1
          Length = 273

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -3

Query: 81  PKTIRTFLHHTKGITPPFTRDKAFSE 4
           P+T R FLHH  GITPP TR  A  +
Sbjct: 151 PQTRRRFLHHLIGITPPTTRPFAIRD 176