DK946281 [AcEST]

DK946281
Clone id	YMU02A01NGRL0012_B11
Library	YMU02
Length	304
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0012_B11. 5' end sequence.
Accession	DK946281
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	GCTGCTTAAATGACTCGTGTTTGGTAGGAAGGCGTGACTATCGCCACCCTATACCTACCA CTGCTTGTGCAAACGACAGTTTACTAGTCTGCTAGTGAATTCGCGGGCAACGAATGCTGT TTGCTTCGCATGCCCTTTGCTCCCCCTATCGCTTCGGGATCTTCTCTCTCCCTAAATTGC ACAGATGTCCCAACCCGCATACCTATCTGCATGTCAATACATCTGGAAAGTGATTCTACA CAAACATCTGCCCAGCCCAATCCTCAATATGTTGAGACCAAAATACCGTCTGAAAAATTT GCAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946281\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_B11, 5' (304 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B4W654
Definition	tr\|B4W654\|B4W654_9CAUL Peptide deformylase OS=Brevundimonas sp. BAL3
Align length	46
Score (bit)	32.7
E-value	9.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK946281\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0012_B11, 5' (304 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B4W654\|B4W654_9CAUL Peptide deformylase OS=Brevundimonas sp. ... 33 9.1 >tr\|B4W654\|B4W654_9CAUL Peptide deformylase OS=Brevundimonas sp. BAL3 GN=BBAL3_2200 PE=4 SV=1 Length = 192 Score = 32.7 bits (73), Expect = 9.1 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -3 Query: 263 GLGWADVCVESLSRCIDMQIGMRVGTSVQFREREDPEAIGGAKGMR 126 G+G A V V +L R I M +G R GT + E + PEA K R Sbjct: 48 GIGLAAVQVGALDRVIVMDLGDRDGTICETEEEDTPEAAEARKNPR 93