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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946250
Clone id YMU02A01NGRL0011_P14
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_P14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
CTCTCTGGCGCGAGACATGCATGAAGACACACGCCCCTTCTGTGTTCTTCTATTTCGCGC
GCGCCCCCCTCCCCATTCAGGGGGCTGTGGACCTGGCCTTCTGCCCTCTCTCGCTCATGC
ACCCTCCTTGCTGGCGGTGGTGCAAGGAATGAAATCCACACTGATAGCGATGGATCGTTC
TCTCTCTACAGCCTGAGTGACCACTCCTTGCTGTGCCCATTCTCCACTGATTGCTTCGGT
GGAGTTCGCTCATCATTGCTTGATGCACTTGCGTGTGATTCCCATATCTGGCTATTGACT
GCGCGGTCTTTTCATTCACCATTTCGAAGGTTGTAACTGTCGACTGCTATCCAGGCCTGC
ATGTAATGTGTTGCTCTCTTTCTTGAGCAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q68F35
Definition sp|Q68F35|S20AA_XENLA Sodium-dependent phosphate transporter 1-A OS=Xenopus laevis
Align length 62
Score (bit) 34.7
E-value 0.15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946250|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_P14, 5'
         (388 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68F35|S20AA_XENLA Sodium-dependent phosphate transporter 1-A...    35   0.15 
sp|Q6PB26|S20AB_XENLA Sodium-dependent phosphate transporter 1-B...    33   0.34 
sp|Q5BL44|S20A1_XENTR Sodium-dependent phosphate transporter 1 O...    32   0.76 
sp|Q0AHC3|GLMM_NITEC Phosphoglucosamine mutase OS=Nitrosomonas e...    32   0.99 
sp|Q82WX6|GLMM_NITEU Phosphoglucosamine mutase OS=Nitrosomonas e...    31   1.7  
sp|Q5I030|SELS_XENTR Selenoprotein S OS=Xenopus tropicalis GN=se...    31   1.7  
sp|P15306|TRBM_MOUSE Thrombomodulin OS=Mus musculus GN=Thbd PE=2...    29   6.4  
sp|Q10408|YD83_SCHPO Uncharacterized protein C1F3.03 OS=Schizosa...    29   8.4  
sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3 OS=Arabidopsis thal...    29   8.4  
sp|O97596|S20A1_FELCA Sodium-dependent phosphate transporter 1 O...    29   8.4  
sp|Q8U9X6|ARLY1_AGRT5 Argininosuccinate lyase 1 OS=Agrobacterium...    29   8.4  
sp|Q8PWV5|SYW_METMA Tryptophanyl-tRNA synthetase OS=Methanosarci...    29   8.4  

>sp|Q68F35|S20AA_XENLA Sodium-dependent phosphate transporter 1-A
           OS=Xenopus laevis GN=slc20a1-A PE=2 SV=1
          Length = 685

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 283 GNHTQVHQAMMSELHRSNQWRMGTARSGHSGCRERTIHRYQCGFHSLHHRQQGGCMSERG 104
           GNH Q  QA+ ++++ S Q++  T     SG        Y+   H LH  + G CM + G
Sbjct: 361 GNHVQFSQAVSNQMNSSGQYQYHTVHKD-SGL-------YKDLLHKLHLAKMGDCMGDSG 412

Query: 103 QK 98
            K
Sbjct: 413 DK 414


>sp|Q6PB26|S20AB_XENLA Sodium-dependent phosphate transporter 1-B
           OS=Xenopus laevis GN=slc20a1-B PE=2 SV=1
          Length = 685

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -1

Query: 283 GNHTQVHQAMMSELHRSNQWRMGTARSGHSGCRERTIHRYQCGFHSLHHRQQGGCMSERG 104
           GNH Q  Q + +E++ S Q++  T     SG        Y+   H LH  + G CM + G
Sbjct: 361 GNHVQFSQTVSNEMNSSGQYQYHTVHKD-SGL-------YKDLLHKLHLAKVGDCMGDSG 412

Query: 103 QK 98
            K
Sbjct: 413 DK 414


>sp|Q5BL44|S20A1_XENTR Sodium-dependent phosphate transporter 1
           OS=Xenopus tropicalis GN=slc20a1 PE=2 SV=1
          Length = 685

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -1

Query: 283 GNHTQVHQAMMSELHRSNQWRMGTARSGHSGCRERTIHRYQCGFHSLHHRQQGGCMSERG 104
           GNH Q  Q + ++++ S Q++  T     SG        Y+   H LH  + G CM + G
Sbjct: 361 GNHVQFSQTVSNQMNSSGQYQYHTVHKD-SGL-------YKDLLHKLHLAKVGDCMGDSG 412

Query: 103 QK 98
            K
Sbjct: 413 DK 414


>sp|Q0AHC3|GLMM_NITEC Phosphoglucosamine mutase OS=Nitrosomonas
           eutropha (strain C91) GN=glmM PE=3 SV=1
          Length = 458

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = -1

Query: 388 AQEREQHITCRPG*QSTVTTFEMVNEKTAQSIARYG---NHTQVHQAMMSELHRSNQWRM 218
           A+ R+Q    + G   T+    M N    Q+  R G       V    +SEL + N W +
Sbjct: 273 AKHRQQRGVLQGGVVGTL----MTNLAVEQAFERIGIPFARANVGDRYVSELLQQNDWYL 328

Query: 217 GTARSGHSGCRER 179
           G   SGH  CR++
Sbjct: 329 GAENSGHIICRDK 341


>sp|Q82WX6|GLMM_NITEU Phosphoglucosamine mutase OS=Nitrosomonas
           europaea GN=glmM PE=3 SV=1
          Length = 458

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG---NHTQVHQAMMSELHRSNQWRMGTARSGHSGCRER 179
           M N    Q+  R G       V    +SEL + N W +G   SGH  CR++
Sbjct: 291 MTNLAVEQAFERLGIPFARANVGDRYVSELLQQNDWYLGAENSGHIICRDK 341


>sp|Q5I030|SELS_XENTR Selenoprotein S OS=Xenopus tropicalis GN=sels
           PE=2 SV=2
          Length = 189

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -3

Query: 227 VENGHSKEWSLRL*RENDPSLSVWISFLAPPPARRVHERERAEGQVHSPLNGEGG 63
           ++ G S + + RL +E  PS S   +  A  P +   ER+   G  ++PL G+GG
Sbjct: 120 MKEGKSSKVACRLGQEPSPSTS---TSAATKPKQEKQERKTLRGSGYNPLTGDGG 171


>sp|P15306|TRBM_MOUSE Thrombomodulin OS=Mus musculus GN=Thbd PE=2
           SV=1
          Length = 577

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 34  PLLCSSISRAPPSPFRGLWTWPSALSRSCTLLAGG 138
           PL    + RAPP    G W W +  + +C++  GG
Sbjct: 216 PLGLELVCRAPPGTSEGHWAWEATGAWNCSVENGG 250


>sp|Q10408|YD83_SCHPO Uncharacterized protein C1F3.03
           OS=Schizosaccharomyces pombe GN=SPAC1F3.03 PE=2 SV=1
          Length = 1004

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = +1

Query: 37  LLCSSISRAPPSPFRGLWTW----PSALSRSCTLLAGG--GARNEIHT 162
           L+  + S  PP P + LW W     S  +    +L GG   A +++HT
Sbjct: 855 LITHNASHVPPRPSKSLWNWLLGEQSTSAEELDILLGGENRAESKVHT 902


>sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana
            GN=XRN3 PE=2 SV=1
          Length = 1020

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -1

Query: 310  KTAQSIARYGNHTQVHQAMMSELHRSNQWRMGTARSGHSGCRERTIHRYQCGFHSLHHRQ 131
            +  Q  +R G ++  HQ      H+  QW       G  G  +        G++  HH Q
Sbjct: 947  REGQHASRGGGYSGNHQNQ----HQQQQWH------GQGGSEQNNPR----GYNGQHHHQ 992

Query: 130  QGGCMSERGQ 101
            QGG    RG+
Sbjct: 993  QGGDHDRRGR 1002


>sp|O97596|S20A1_FELCA Sodium-dependent phosphate transporter 1
           OS=Felis silvestris catus GN=Slc20a1 PE=2 SV=2
          Length = 681

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -1

Query: 283 GNHTQVHQAMMSELHRSNQWRMGTARSGHSGCRERTIHRYQCGFHSLHHRQQGGCMSERG 104
           GN  Q +QA+ ++++ S  ++  T     SG  +  +H+       LH  + G CM + G
Sbjct: 361 GNLVQFNQAVSNQMNSSGHYQYHTVHKD-SGLYKELLHK-------LHLAKVGDCMGDSG 412

Query: 103 QK 98
            K
Sbjct: 413 DK 414
tr_hit_id B7JZ31
Definition tr|B7JZ31|B7JZ31_SYNP8 Stress protein OS=Synechococcus sp. (strain PCC 8801 / RF-1)
Align length 58
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946250|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_P14, 5'
         (388 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7JZ31|B7JZ31_SYNP8 Stress protein OS=Synechococcus sp. (stra...    37   0.38 
tr|B4C4U6|B4C4U6_9CHRO Stress protein OS=Cyanothece sp. PCC 8802...    37   0.38 
tr|B7JZ33|B7JZ33_SYNP8 Stress protein OS=Synechococcus sp. (stra...    36   0.84 
tr|B4C4U8|B4C4U8_9CHRO Stress protein OS=Cyanothece sp. PCC 8802...    36   0.84 
tr|A8N1W5|A8N1W5_COPC7 Predicted protein OS=Coprinopsis cinerea ...    36   1.1  
tr|Q962A5|Q962A5_CRAGI Transcription factor Rel 1 OS=Crassostrea...    35   1.4  
tr|Q962A4|Q962A4_CRAGI Transcription factor Rel 2 OS=Crassostrea...    35   1.9  
tr|Q7JP26|Q7JP26_DROME Stripe a protein OS=Drosophila melanogast...    33   7.1  
tr|Q24163|Q24163_DROME Stripe b protein OS=Drosophila melanogast...    33   7.1  
tr|A3IZK1|A3IZK1_9CHRO General stress protein OS=Cyanothece sp. ...    33   9.3  
tr|Q1JW36|Q1JW36_DESAC Putative uncharacterized protein OS=Desul...    33   9.3  

>tr|B7JZ31|B7JZ31_SYNP8 Stress protein OS=Synechococcus sp. (strain
           PCC 8801 / RF-1) GN=PCC8801_2076 PE=4 SV=1
          Length = 192

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG--NHTQVHQAM-MSELH-RSNQWRMGTARSGHSGCRERTIHRYQ 161
           +V+ KT Q I RY       +  AM M+E++ + NQWRM    SG+ G  +  ++RYQ
Sbjct: 134 LVDVKTKQEILRYDLTEDCSIETAMVMAEIYNKDNQWRMSAVGSGYQGGLQAILNRYQ 191


>tr|B4C4U6|B4C4U6_9CHRO Stress protein OS=Cyanothece sp. PCC 8802
           GN=Cyan8802DRAFT_4053 PE=4 SV=1
          Length = 192

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG--NHTQVHQAM-MSELH-RSNQWRMGTARSGHSGCRERTIHRYQ 161
           +V+ KT Q I RY       +  AM M+E++ + NQWRM    SG+ G  +  ++RYQ
Sbjct: 134 LVDVKTKQEILRYDLTEDCSIETAMVMAEIYNKDNQWRMSAVGSGYQGGLQAILNRYQ 191


>tr|B7JZ33|B7JZ33_SYNP8 Stress protein OS=Synechococcus sp. (strain
           PCC 8801 / RF-1) GN=PCC8801_2078 PE=4 SV=1
          Length = 192

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG--NHTQVHQAM-MSELHRS-NQWRMGTARSGHSGCRERTIHRYQ 161
           +V+ KT Q + RY       +  AM M+E+++  NQWRM    +G+ G  +  ++RYQ
Sbjct: 134 LVDVKTKQEVLRYDLTEDCSIETAMIMAEIYKKDNQWRMSAVGAGYQGGLQAVLNRYQ 191


>tr|B4C4U8|B4C4U8_9CHRO Stress protein OS=Cyanothece sp. PCC 8802
           GN=Cyan8802DRAFT_4055 PE=4 SV=1
          Length = 192

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG--NHTQVHQAM-MSELHRS-NQWRMGTARSGHSGCRERTIHRYQ 161
           +V+ KT Q + RY       +  AM M+E+++  NQWRM    +G+ G  +  ++RYQ
Sbjct: 134 LVDVKTKQEVLRYDLTEDCSIETAMIMAEIYKKDNQWRMSAVGAGYQGGLQAVLNRYQ 191


>tr|A8N1W5|A8N1W5_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_03658 PE=4
           SV=1
          Length = 502

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 248 RTPPKQSVENGHSKEWSLRL*RENDPSLSVWISFLAPPPARRVHERER-AEGQVHSPLNG 72
           +TP ++ VE     EW++R+     P+   W    AP P   +++R +  EG+   P  G
Sbjct: 375 KTPTREEVEENEEPEWAVRIGHAPPPT---W----APRPGDDMNKRRKTGEGEEAGPSTG 427

Query: 71  EGGAREIEE 45
             G +E+EE
Sbjct: 428 IPGPQEVEE 436


>tr|Q962A5|Q962A5_CRAGI Transcription factor Rel 1 OS=Crassostrea
           gigas PE=2 SV=1
          Length = 615

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
 Frame = -3

Query: 287 IWESHASASSNDE--------RTPPKQSVENGHSKEWSLRL*RENDPSLSVWISFL---- 144
           +WE  A  S+ND         RTPP +       KE  ++L R N+P  S  I F+    
Sbjct: 303 VWEDFADFSTNDIHRQYAIVFRTPPYKDTMITRPKEVKMQLKRNNEPETSDSIPFIYMPE 362

Query: 143 APPPARRVHERERAEGQV 90
            P P R + +R+R   Q+
Sbjct: 363 DPDPDRIMEKRKRKADQL 380


>tr|Q962A4|Q962A4_CRAGI Transcription factor Rel 2 OS=Crassostrea
           gigas PE=2 SV=1
          Length = 614

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
 Frame = -3

Query: 287 IWESHASASSNDE--------RTPPKQSVENGHSKEWSLRL*RENDPSLSVWISFL---- 144
           +WE  A  S+ND         RTPP +       KE  ++L R N+P  S  I F+    
Sbjct: 302 LWEDFADFSTNDIHRQYAIVFRTPPYKDTMITRPKEVKMQLKRNNEPETSDSIPFIYMPE 361

Query: 143 APPPARRVHERERAEGQV 90
            P P R + +R+R   Q+
Sbjct: 362 DPDPDRIMEKRKRKADQL 379


>tr|Q7JP26|Q7JP26_DROME Stripe a protein OS=Drosophila melanogaster
           GN=sr PE=2 SV=1
          Length = 1180

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
 Frame = -1

Query: 343 STVTTFEMVNEKTAQSIARYGNHTQVHQAMMSEL------------HRSNQWRMGTARSG 200
           +T T+ +  +E   + +   GNHTQ HQ    +L            H S+Q +    +  
Sbjct: 556 TTTTSKQTTSESNTECVGSPGNHTQSHQQQQQQLQHNNTSSSNSNCHHSHQQQQQQQQQQ 615

Query: 199 HSGCRERTIHRYQC-------GFHSLHH 137
           H    ++   ++Q        G+H  HH
Sbjct: 616 HMSSPQQQYQQHQILHQQQQFGYHHHHH 643


>tr|Q24163|Q24163_DROME Stripe b protein OS=Drosophila melanogaster
           GN=sr PE=2 SV=2
          Length = 906

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
 Frame = -1

Query: 343 STVTTFEMVNEKTAQSIARYGNHTQVHQAMMSEL------------HRSNQWRMGTARSG 200
           +T T+ +  +E   + +   GNHTQ HQ    +L            H S+Q +    +  
Sbjct: 282 TTTTSKQTTSESNTECVGSPGNHTQSHQQQQQQLQHNNTSSSNSNCHHSHQQQQQQQQQQ 341

Query: 199 HSGCRERTIHRYQC-------GFHSLHH 137
           H    ++   ++Q        G+H  HH
Sbjct: 342 HMSSPQQQYQQHQILHQQQQFGYHHHHH 369


>tr|A3IZK1|A3IZK1_9CHRO General stress protein OS=Cyanothece sp. CCY
           0110 GN=CY0110_14160 PE=4 SV=1
          Length = 192

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = -1

Query: 322 MVNEKTAQSIARYG--NHTQVHQAM-MSELHRSN-QWRMGTARSGHSGCRERTIHRYQ 161
           +VN K+ + + RY       +  AM M+E++R N +WR+    +G+ G  +  + RYQ
Sbjct: 134 VVNAKSNEEVIRYDLTEDCSIETAMIMAEIYRKNGEWRVNAVSAGYQGGLQALLDRYQ 191