DK946208
Clone id YMU02A01NGRL0011_N09
Library
Length 288
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_N09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCACTCGACAGTACCATCAAGTGTTAGTCATGGCTTCTAAGAAGATAACGTGCATGC
TGGTGATAGTGATGGTGATGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAAGTCC
TGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTCCCAGAG
ACAAGAAGGGATGGTATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGGCAAAAATG
ATGAATAGAATAAATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P60330
Definition sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus
Align length 62
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946208|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_N09, 5'
(257 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus GN=Espl1 PE=2 SV=1 30 4.8
sp|Q4U2V3|CBPC1_DANRE Cytosolic carboxypeptidase 1 OS=Danio reri... 29 8.2

>sp|P60330|ESPL1_MOUSE Separin OS=Mus musculus GN=Espl1 PE=2 SV=1
Length = 2118

Score = 29.6 bits (65), Expect = 4.8
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -3

Query: 231 PILSPPCLSFQYTIPSCLWEIPSA--TSDI**VSPPFLPG-LQH*QRCSCMPPASPSLSP 61
P L P L T+ + I S+ +S + PP PG L H C C+ ASP+LS
Sbjct: 1094 PFLKGPALELVDTVLNEPGPIQSSVNSSPVLKTKPPPNPGFLSHLPSCDCLLCASPALSA 1153

Query: 60 AC 55
C
Sbjct: 1154 VC 1155


>sp|Q4U2V3|CBPC1_DANRE Cytosolic carboxypeptidase 1 OS=Danio rerio
GN=agtpbp1 PE=2 SV=1
Length = 1153

Score = 28.9 bits (63), Expect = 8.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3

Query: 39 SKKITCMLVIVMVMLVAYMSSVANAEVLEEKGGLPTK---YLTWQKGSPRDK 185
SKK T +L + + L A + S NA ++G LPT Y W + R +
Sbjct: 212 SKKSTTLLKVALDTLAALLKSGMNARRAVDRGYLPTLLAIYQDWHRNDTRHR 263


tr_hit_id B7ATL1
Definition tr|B7ATL1|B7ATL1_9BACE Putative uncharacterized protein OS=Bacteroides pectinophilus ATCC 43243
Align length 65
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946208|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_N09, 5'
(257 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ATL1|B7ATL1_9BACE Putative uncharacterized protein OS=Bacte... 34 3.2
tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 34 4.2
tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.2
tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.2
tr|Q5GXZ8|Q5GXZ8_XANOR GumL protein OS=Xanthomonas oryzae pv. or... 33 9.3
tr|Q2P113|Q2P113_XANOM GumL protein OS=Xanthomonas oryzae pv. or... 33 9.3
tr|B2SUK4|B2SUK4_XANOP Exopolysaccharide xanthan biosynthesis py... 33 9.3

>tr|B7ATL1|B7ATL1_9BACE Putative uncharacterized protein
OS=Bacteroides pectinophilus ATCC 43243 GN=BACPEC_01483
PE=4 SV=1
Length = 205

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3

Query: 48 ITCMLVIVMVMLVAYMSSVANAEVLEEKGGLPTKYLTWQKGSPRDKKGWYIGTTSREEKE 227
I LVI++++++A ++ +N +L + L KY +WQ+ R +K ++EKE
Sbjct: 142 INVALVIIIIVMIAITATSSNPNILNYETKLQDKYSSWQEELDRRQK-----VIEQKEKE 196

Query: 228 LGKND 242
L +D
Sbjct: 197 LHISD 201


>tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp.
japonica GN=Os11g0245200 PE=4 SV=1
Length = 897

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3

Query: 252 YSIHHFCPILSPPCLSFQYTIPSCLWEIP 166
YS CP L P CLS QY P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35675 PE=4 SV=1
Length = 954

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3

Query: 252 YSIHHFCPILSPPCLSFQYTIPSCLWEIP 166
YS CP L P CLS QY P+C +P
Sbjct: 427 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 455


>tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1
Length = 893

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3

Query: 252 YSIHHFCPILSPPCLSFQYTIPSCLWEIP 166
YS CP L P CLS QY P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|Q5GXZ8|Q5GXZ8_XANOR GumL protein OS=Xanthomonas oryzae pv.
oryzae GN=gumL PE=4 SV=1
Length = 264

Score = 32.7 bits (73), Expect = 9.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3

Query: 15 YHQVLVMAS-KKITCMLVIVMVMLVAYMSSVANAEVLEEKGGLPTKYLTWQKGSPRDKKG 191
Y + LV + K T M ++ V LV +SS + +L E G+P YL W G R K
Sbjct: 160 YKEHLVFPNVKPATFMSALLGVELV--VSSSLHGLILAEAYGIPAVYLDWGNGEDRFKYD 217

Query: 192 WYIGTTSREEKELGKNDE 245
Y T R + G + E
Sbjct: 218 DYYNGTGRMQWHSGNSVE 235


>tr|Q2P113|Q2P113_XANOM GumL protein OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=XOO3009 PE=4 SV=1
Length = 264

Score = 32.7 bits (73), Expect = 9.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3

Query: 15 YHQVLVMAS-KKITCMLVIVMVMLVAYMSSVANAEVLEEKGGLPTKYLTWQKGSPRDKKG 191
Y + LV + K T M ++ V LV +SS + +L E G+P YL W G R K
Sbjct: 160 YKEHLVFPNVKPATFMSALLGVELV--VSSSLHGLILAEAYGIPAVYLDWGNGEDRFKYD 217

Query: 192 WYIGTTSREEKELGKNDE 245
Y T R + G + E
Sbjct: 218 DYYNGTGRMQWHSGNSVE 235


>tr|B2SUK4|B2SUK4_XANOP Exopolysaccharide xanthan biosynthesis
pyruvyltransferase GumL OS=Xanthomonas oryzae pv. oryzae
(strain PXO99A) GN=gumL PE=4 SV=1
Length = 264

Score = 32.7 bits (73), Expect = 9.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3

Query: 15 YHQVLVMAS-KKITCMLVIVMVMLVAYMSSVANAEVLEEKGGLPTKYLTWQKGSPRDKKG 191
Y + LV + K T M ++ V LV +SS + +L E G+P YL W G R K
Sbjct: 160 YKEHLVFPNVKPATFMSALLGVELV--VSSSLHGLILAEAYGIPAVYLDWGNGEDRFKYD 217

Query: 192 WYIGTTSREEKELGKNDE 245
Y T R + G + E
Sbjct: 218 DYYNGTGRMQWHSGNSVE 235