DK946160
Clone id YMU02A01NGRL0011_K18
Library
Length 190
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_K18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCGACAATGCTGAGTGACGAAAAGTAGCGAAGGCAAATCAAATAAGCGTTTGATGTGATC
TTTGTGGTTAGGGTAGCAGTTCTCTTGACCTCTCTTTTAGACGGTAATGCAGATGGCATA
TATATGCTGGTGTTCTATAAATTTACACTCTGGCATTTCCCAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8A255
Definition sp|Q8A255|MRAY_BACTN Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Bacteroides thetaiotaomicron
Align length 30
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946160|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_K18, 5'
(161 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8A255|MRAY_BACTN Phospho-N-acetylmuramoyl-pentapeptide-trans... 29 8.4

>sp|Q8A255|MRAY_BACTN
Phospho-N-acetylmuramoyl-pentapeptide-transferase
OS=Bacteroides thetaiotaomicron GN=mraY PE=3 SV=1
Length = 422

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1

Query: 64 VVRVAVLLTSLLDGNADGIYMLVFYKFTLW 153
++ VA+L+ LL G D IYM++ T+W
Sbjct: 80 IIIVAILIPCLLLGKLDNIYMILMLITTVW 109


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946160|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_K18, 5'
(161 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******