DK946142 |
Clone id |
YMU02A01NGRL0011_J21 |
Library |
YMU02 |
Length |
409 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_J21. 5' end sequence. |
Accession |
DK946142 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GACTAACATGGCTCGTGTGAATTTGGATATCCCAGCTGTTTCTATCTTCACCTCTCTTCT CTGCCCTGGTATCTTCATTACCACCTCCGGTCTCATTCACACTGAGGAACGTGAAGGTCT TTATTTCAGTCTCTACAGACGCAGGCGGGCCAATCTGACACCGCAAGGGATGTAGGCACG TTAGGTTTGGTGGCCATCCCTGCAGGCTTGTTGGCTAACCCTGTGGTGTTTTGGTCCCTC TTCACCCTAAAATCAACGCGTTGTGTCCTGCCGCCAGGCCCCCGCGGCGCCATCCGAGCC TTGCAAAGAGTGAGCTACTTGGTCATTCTTGGCATCATCTCTCGGTCTGCCTACACCAAA ATCAGATCGGTTCTGGTCTGCCCCATGCGCCCTTTGGTCTTCTTGGTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3YXI0 |
Definition |
sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) |
Align length |
53 |
Score (bit) |
31.2 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T9J3 |
Definition |
tr|A9T9J3|A9T9J3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
67 |
Score (bit) |
81.3 |
E-value |
5.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946142|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0011_J21, 5' (409 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T9J3|A9T9J3_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 5e-16 tr|A8HMR7|A8HMR7_CHLRE Predicted protein OS=Chlamydomonas reinha... 84 1e-15 tr|A9NRZ1|A9NRZ1_PICSI Putative uncharacterized protein OS=Picea... 85 2e-15 tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome... 78 3e-13 tr|Q8LCA0|Q8LCA0_ARATH Putative uncharacterized protein OS=Arabi... 77 4e-13 tr|Q9SCQ8|Q9SCQ8_ARATH Putative uncharacterized protein T3A5.60 ... 75 2e-12 tr|Q941E5|Q941E5_ARATH AT3g50680/T3A5_60 (Putative uncharacteriz... 75 2e-12 tr|Q67YF1|Q67YF1_ARATH Putative uncharacterized protein At3g5068... 75 2e-12 tr|B6SQZ8|B6SQZ8_MAIZE Putative uncharacterized protein OS=Zea m... 69 3e-12 tr|Q8S5E8|Q8S5E8_ORYSA Putative uncharacterized protein OSJNBb00... 70 7e-11 tr|Q7XG51|Q7XG51_ORYSJ Os10g0213700 protein OS=Oryza sativa subs... 70 7e-11 tr|A2Z5W2|A2Z5W2_ORYSI Putative uncharacterized protein OS=Oryza... 70 7e-11 tr|A4SAY1|A4SAY1_OSTLU Predicted protein OS=Ostreococcus lucimar... 57 4e-07 tr|B7GBH0|B7GBH0_PHATR Predicted protein (Fragment) OS=Phaeodact... 55 2e-06 tr|Q00W86|Q00W86_OSTTA Chromosome 14 contig 1, DNA sequence OS=O... 53 9e-06 tr|B8C886|B8C886_THAPS Predicted protein OS=Thalassiosira pseudo... 43 8e-04 tr|Q4VDD8|Q4VDD8_PINRE P-166-4_1 (Fragment) OS=Pinus resinosa GN... 38 0.22 tr|A8PFS8|A8PFS8_COPC7 Putative uncharacterized protein OS=Copri... 34 3.2 tr|Q5KEC2|Q5KEC2_CRYNE Putative uncharacterized protein OS=Crypt... 34 4.2 tr|Q6P4K3|Q6P4K3_XENTR Metadherin OS=Xenopus tropicalis GN=mtdh ... 33 5.5 tr|B8HII8|B8HII8_9MICC Putative uncharacterized protein OS=Arthr... 33 5.5 tr|B7QMT7|B7QMT7_IXOSC Putative uncharacterized protein OS=Ixode... 33 5.5 tr|B6ALW0|B6ALW0_9BACT Aminopeptidase N OS=Leptospirillum sp. Gr... 33 7.1 tr|A3EPE2|A3EPE2_9BACT Putative aminopeptidase OS=Leptospirillum... 33 7.1 tr|Q5DA06|Q5DA06_SCHJA SJCHGC08873 protein OS=Schistosoma japoni... 33 7.2
>tr|A9T9J3|A9T9J3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19071 PE=4 SV=1 Length = 111
Score = 81.3 bits (199), Expect(2) = 5e-16 Identities = 40/67 (59%), Positives = 50/67 (74%) Frame = +1
Query: 193 AIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGIISRSAYTKIRSV 372 AI GL+ANPVV WSL+TLK+T C LPPGP GA+ A++ VSYLVI+G I SAYTK+++ Sbjct: 2 AIAGGLVANPVVTWSLYTLKTTGCGLPPGPGGALGAIEGVSYLVIVGTIGWSAYTKVKTG 61
Query: 373 LVCPMRP 393 P P Sbjct: 62 SGLPSGP 68
Score = 26.2 bits (56), Expect(2) = 5e-16 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3
Query: 369 GSGLPHAPFGLLG 407 GSGLP P+GLLG Sbjct: 61 GSGLPSGPYGLLG 73
>tr|A8HMR7|A8HMR7_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CGLD6 PE=4 SV=1 Length = 150
Score = 83.6 bits (205), Expect(2) = 1e-15 Identities = 44/88 (50%), Positives = 59/88 (67%) Frame = +1
Query: 130 SLQTQAGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQR 309 S++ QAG SD+A +VGT GL AI GL AN ++ WS +TLK+T LPPGP GA+ A + Sbjct: 36 SVRAQAGSSDSA-NVGTAGLAAIALGLPANAIMLWSEYTLKTTGSGLPPGPGGALGAAEG 94
Query: 310 VSYLVILGIISRSAYTKIRSVLVCPMRP 393 +SYLV+L +I S YTK+ + P P Sbjct: 95 ISYLVVLAVIGWSIYTKVSTGTGLPAGP 122
Score = 22.7 bits (47), Expect(2) = 1e-15 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3
Query: 369 GSGLPHAPFGLLG 407 G+GLP P GLLG Sbjct: 115 GTGLPAGPSGLLG 127
>tr|A9NRZ1|A9NRZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 166
Score = 84.7 bits (208), Expect = 2e-15 Identities = 41/85 (48%), Positives = 56/85 (65%) Frame = +1
Query: 151 QSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVIL 330 Q + +G +G AI GL+ANPVV WSL+TLK+T C LPPGP GA+ AL+ +S+LV+ Sbjct: 43 QLEEPESLGAIGNAAIVGGLIANPVVGWSLYTLKTTGCGLPPGPGGALGALEGISFLVVF 102
Query: 331 GIISRSAYTKIRSVLVCPMRPLVFL 405 G+I S YTK+++ P P L Sbjct: 103 GLIGWSVYTKVKTGSGLPSGPFGLL 127
>tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024960001 PE=4 SV=1 Length = 303
Score = 77.8 bits (190), Expect = 3e-13 Identities = 41/87 (47%), Positives = 58/87 (66%) Frame = +1
Query: 145 AGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLV 324 A +S + D G VAI GL++ PV+ WSL+TLK+T C LPPGP G+I AL+ VSYL+ Sbjct: 179 AKESSNSGD-GITEKVAIVGGLVSTPVIAWSLYTLKTTGCGLPPGPGGSIGALEGVSYLI 237
Query: 325 ILGIISRSAYTKIRSVLVCPMRPLVFL 405 ++GI++ S+YTK ++ P P L Sbjct: 238 VVGIVAWSSYTKYKTGSGLPNGPFGLL 264
>tr|Q8LCA0|Q8LCA0_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 158
Score = 77.0 bits (188), Expect = 4e-13 Identities = 41/87 (47%), Positives = 52/87 (59%) Frame = +1
Query: 145 AGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLV 324 A D G L AI GL++ PV+ WSL+TLK+T C LPPGP G I AL+ VSYLV Sbjct: 33 AKAKDNTDTGGFLETAAIAGGLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLV 92
Query: 325 ILGIISRSAYTKIRSVLVCPMRPLVFL 405 ++GI+ S YTK ++ P P L Sbjct: 93 VVGIVGWSLYTKTKTGSGLPNGPFGLL 119
Score = 38.1 bits (87), Expect = 0.22 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +1
Query: 175 GTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGII 339 G +G + + L+ +V WSL+T T LP GP G + A++ +SYL +L I+ Sbjct: 80 GLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAIL 134
>tr|Q9SCQ8|Q9SCQ8_ARATH Putative uncharacterized protein T3A5.60 OS=Arabidopsis thaliana GN=T3A5.60 PE=4 SV=1 Length = 319
Score = 74.7 bits (182), Expect = 2e-12 Identities = 40/87 (45%), Positives = 51/87 (58%) Frame = +1
Query: 145 AGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLV 324 A D G L AI L++ PV+ WSL+TLK+T C LPPGP G I AL+ VSYLV Sbjct: 33 AKAKDNTDTGGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLV 92
Query: 325 ILGIISRSAYTKIRSVLVCPMRPLVFL 405 ++GI+ S YTK ++ P P L Sbjct: 93 VVGIVGWSLYTKTKTGSGLPNGPFGLL 119
Score = 38.1 bits (87), Expect = 0.22 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +1
Query: 175 GTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGII 339 G +G + + L+ +V WSL+T T LP GP G + A++ +SYL +L I+ Sbjct: 80 GLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAIL 134
>tr|Q941E5|Q941E5_ARATH AT3g50680/T3A5_60 (Putative uncharacterized protein At3g50685) (Putative uncharacterized protein At3g50685/At3g50680) OS=Arabidopsis thaliana GN=At3g50685/At3g50680 PE=2 SV=1 Length = 158
Score = 74.7 bits (182), Expect = 2e-12 Identities = 40/87 (45%), Positives = 51/87 (58%) Frame = +1
Query: 145 AGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLV 324 A D G L AI L++ PV+ WSL+TLK+T C LPPGP G I AL+ VSYLV Sbjct: 33 AKAKDNTDTGGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLV 92
Query: 325 ILGIISRSAYTKIRSVLVCPMRPLVFL 405 ++GI+ S YTK ++ P P L Sbjct: 93 VVGIVGWSLYTKTKTGSGLPNGPFGLL 119
Score = 38.1 bits (87), Expect = 0.22 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +1
Query: 175 GTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGII 339 G +G + + L+ +V WSL+T T LP GP G + A++ +SYL +L I+ Sbjct: 80 GLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAIL 134
>tr|Q67YF1|Q67YF1_ARATH Putative uncharacterized protein At3g50685 OS=Arabidopsis thaliana GN=At3g50685 PE=2 SV=1 Length = 158
Score = 74.7 bits (182), Expect = 2e-12 Identities = 40/87 (45%), Positives = 51/87 (58%) Frame = +1
Query: 145 AGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLV 324 A D G L AI L++ PV+ WSL+TLK+T C LPPGP G I AL+ VSYLV Sbjct: 33 AKAKDNTDTGGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLV 92
Query: 325 ILGIISRSAYTKIRSVLVCPMRPLVFL 405 ++GI+ S YTK ++ P P L Sbjct: 93 VVGIVGWSLYTKTKTGSGLPNGPFGLL 119
Score = 38.1 bits (87), Expect = 0.22 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +1
Query: 175 GTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGII 339 G +G + + L+ +V WSL+T T LP GP G + A++ +SYL +L I+ Sbjct: 80 GLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAIL 134
>tr|B6SQZ8|B6SQZ8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 170
Score = 68.9 bits (167), Expect(2) = 3e-12 Identities = 38/90 (42%), Positives = 55/90 (61%) Frame = +1
Query: 124 FQSLQTQAGQSDTARDVGTLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRAL 303 F+S + +++ + TL L A AGL ++ VV WSL+TL +T C LPPGP GA+ A Sbjct: 38 FRSRRLITCKAEPSGGNSTLELGAGAAGLASSAVVAWSLYTLNTTGCGLPPGPGGALGAA 97
Query: 304 QRVSYLVILGIISRSAYTKIRSVLVCPMRP 393 + VSYLV+ G++ S TK+R+ P P Sbjct: 98 EGVSYLVVAGLVGWSVTTKVRTGSGLPAGP 127
Score = 25.8 bits (55), Expect(2) = 3e-12 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3
Query: 369 GSGLPHAPFGLLG 407 GSGLP P+GLLG Sbjct: 120 GSGLPAGPYGLLG 132
>tr|Q8S5E8|Q8S5E8_ORYSA Putative uncharacterized protein OSJNBb0047B19.16 OS=Oryza sativa GN=OSJNBb0047B19.16 PE=4 SV=1 Length = 163
Score = 69.7 bits (169), Expect = 7e-11 Identities = 38/76 (50%), Positives = 48/76 (63%) Frame = +1
Query: 178 TLGLVAIPAGLLANPVVFWSLFTLKSTRCVLPPGPRGAIRALQRVSYLVILGIISRSAYT 357 TL L A AGL ++ VV WSL+TLK+T C LPPGP GA+ A + VSYLV+ +I S T Sbjct: 49 TLELAAGAAGLASSSVVAWSLYTLKTTGCGLPPGPGGALGAAEGVSYLVVAALIGWSLTT 108
Query: 358 KIRSVLVCPMRPLVFL 405 K+R+ P P L Sbjct: 109 KVRTGSGLPAGPFGLL 124
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