DK946139
Clone id YMU02A01NGRL0011_J17
Library
Length 204
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_J17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
AGTAACTATTGCTTTGTAATGTACAATTTGTATTCTGAGAACAAACAATGAAAAATCCAC
GGGTCTTTGCCCATTCACTACACGTTACAATCGACATACCACACCCCCTCGCCTGGAGTT
AGAAAATTATTGCTTCCTTTGTCACTTGCCTACCTTGCACATAGAGTCAAAAAACCAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85FK1
Definition sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS=Adiantum capillus-veneris
Align length 55
Score (bit) 74.3
E-value 2.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946139|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J17, 5'
(168 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS... 74 2e-13
sp|Q2L929|RK33_GOSHI 50S ribosomal protein L33, chloroplastic OS... 57 3e-08
sp|A0ZZ56|RK33_GOSBA 50S ribosomal protein L33, chloroplastic OS... 57 3e-08
sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic OS... 57 4e-08
sp|B1NWH1|RK33_MANES 50S ribosomal protein L33, chloroplastic OS... 55 8e-08
sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic OS... 55 8e-08
sp|A0A356|RK33_COFAR 50S ribosomal protein L33, chloroplastic OS... 55 8e-08
sp|Q68RY5|RK33_PANGI 50S ribosomal protein L33, chloroplastic OS... 54 2e-07
sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic OS... 54 2e-07
sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS... 54 3e-07
sp|Q0G9U1|RK33_DAUCA 50S ribosomal protein L33, chloroplastic OS... 54 3e-07
sp|A4QJV2|RK33_OLIPU 50S ribosomal protein L33, chloroplastic OS... 53 4e-07
sp|A4QLV4|RK33_NASOF 50S ribosomal protein L33, chloroplastic OS... 53 4e-07
sp|Q2QD68|RK33_CUCSA 50S ribosomal protein L33, chloroplastic OS... 53 4e-07
sp|Q0ZIZ9|RK33_VITVI 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|Q49KX8|RK33_EUCGG 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|B5LMP5|RK33_CICAR 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS... 53 5e-07
sp|A4GYT2|RK33_POPTR 50S ribosomal protein L33, chloroplastic OS... 52 7e-07
sp|Q14FD6|RK33_POPAL 50S ribosomal protein L33, chloroplastic OS... 52 7e-07
sp|Q1KXT8|RK33_HELAN 50S ribosomal protein L33, chloroplastic OS... 52 7e-07
sp|B2LML4|RK33_GUIAB 50S ribosomal protein L33, chloroplastic OS... 52 7e-07
sp|Q09MF7|RK33_CITSI 50S ribosomal protein L33, chloroplastic OS... 52 7e-07
sp|P06393|RK33_TOBAC 50S ribosomal protein L33, chloroplastic OS... 52 9e-07
sp|P0C457|RK33_ORYSJ 50S ribosomal protein L33, chloroplastic OS... 52 9e-07
sp|P0C456|RK33_ORYSI 50S ribosomal protein L33, chloroplastic OS... 52 9e-07
sp|P0C455|RK33_ORYSA 50S ribosomal protein L33, chloroplastic OS... 52 9e-07
sp|Q6ENF2|RK33_ORYNI 50S ribosomal protein L33, chloroplastic OS... 52 9e-07

>sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic
OS=Adiantum capillus-veneris GN=rpl33 PE=2 SV=2
Length = 66

Score = 74.3 bits (181), Expect = 2e-13
Identities = 36/55 (65%), Positives = 38/55 (69%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTIAL CT CI R + KS GLC +TTR NR TP RLELE YCF CH TLH E
Sbjct: 9 VTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYCFHCHKHTLHKE 63


>sp|Q2L929|RK33_GOSHI 50S ribosomal protein L33, chloroplastic
OS=Gossypium hirsutum GN=rpl33 PE=3 SV=1
Length = 66

Score = 57.0 bits (136), Expect = 3e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C+ N++STG+ + T+ NRH TP RLEL+ +C C+ T+H E
Sbjct: 9 VTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFCPYCYKHTIHGE 63


>sp|A0ZZ56|RK33_GOSBA 50S ribosomal protein L33, chloroplastic
OS=Gossypium barbadense GN=rpl33 PE=3 SV=1
Length = 66

Score = 57.0 bits (136), Expect = 3e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C+ N++STG+ + T+ NRH TP RLEL+ +C C+ T+H E
Sbjct: 9 VTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFCPYCYKHTIHGE 63


>sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic
OS=Carica papaya GN=rpl33 PE=3 SV=1
Length = 66

Score = 56.6 bits (135), Expect = 4e-08
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C+ N++STG+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 VTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGE 63


>sp|B1NWH1|RK33_MANES 50S ribosomal protein L33, chloroplastic
OS=Manihot esculenta GN=rpl33 PE=3 SV=1
Length = 66

Score = 55.5 bits (132), Expect = 8e-08
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+ + L CT C + N+KSTG+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 IRVILECTTCTRNSVNKKSTGISRYITQKNRHNTPSRLELRKFCRYCYKHTIHGE 63


>sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic
OS=Cryptomeria japonica GN=rpl33 PE=3 SV=1
Length = 66

Score = 55.5 bits (132), Expect = 8e-08
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C + N+KS G+ +TTR NR TP RLEL+ +C C+ T+H E
Sbjct: 9 VTITLECTSCTQDSVNKKSPGISRYTTRKNRRNTPLRLELKKFCPYCYKHTIHGE 63


>sp|A0A356|RK33_COFAR 50S ribosomal protein L33, chloroplastic
OS=Coffea arabica GN=rpl33 PE=3 SV=1
Length = 66

Score = 55.5 bits (132), Expect = 8e-08
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VT+ L CT C+ + N+ STG+ + T+ NRH TP RLEL+ +C C+ T+H E
Sbjct: 9 VTVILECTDCVRNSVNKVSTGISRYITQKNRHNTPNRLELKKFCPYCYKHTVHGE 63


>sp|Q68RY5|RK33_PANGI 50S ribosomal protein L33, chloroplastic
OS=Panax ginseng GN=rpl33 PE=3 SV=1
Length = 66

Score = 54.3 bits (129), Expect = 2e-07
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+T+ L CT C+ N+ STG+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 ITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTIHGE 63


>sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic
OS=Morus indica GN=rpl33 PE=3 SV=1
Length = 66

Score = 53.9 bits (128), Expect = 2e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C+ N++S G+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 VTIILECTSCLRNRVNKESRGISRYITQKNRHNTPSRLELRKFCPSCYKHTIHGE 63


>sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic
OS=Lepidium virginicum GN=rpl33 PE=3 SV=1
Length = 66

Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
VTI L CT C+ ++S G+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 VTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRKFCAYCYKHTIHGE 63


tr_hit_id A9QC76
Definition tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment) OS=Trachelium caeruleum
Align length 55
Score (bit) 57.0
E-value 5.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946139|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_J17, 5'
(168 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment) OS=T... 57 5e-07
tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment) OS=T... 54 3e-06
tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1 54 3e-06
tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus banca... 54 3e-06
tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium subter... 54 5e-06
tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinife... 53 9e-06
tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment) OS=A... 52 2e-05
tr|A9QAW1|A9QAW1_9APIA 50S ribosomal protein L33 (Fragment) OS=A... 52 2e-05
tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment) OS=Y... 51 3e-05
tr|B0LP34|B0LP34_9CARY 50S ribosomal protein L33 OS=Silene aegyp... 51 3e-05
tr|Q4FG90|Q4FG90_NUPAD 50S ribosomal protein L33 (Fragment) OS=N... 51 3e-05
tr|A9QBT0|A9QBT0_PASBI 50S ribosomal protein L33 (Fragment) OS=P... 51 3e-05
tr|A9QBB4|A9QBB4_ELAOL 50S ribosomal protein L33 (Fragment) OS=E... 51 3e-05
tr|Q4FG89|Q4FG89_RANMC 50S ribosomal protein L33 (Fragment) OS=R... 50 4e-05
tr|B8Y2Z5|B8Y2Z5_FESAR Ribosomal protein L33 OS=Festuca arundina... 50 6e-05
tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria david... 50 6e-05
tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M... 50 6e-05
tr|B6RRU3|B6RRU3_9CARY Ribosomal protein L33 OS=Eudianthe laeta ... 50 7e-05
tr|B0LNQ8|B0LNQ8_SILLA 50S ribosomal protein L33 OS=Silene latif... 50 7e-05
tr|B4Y1W1|B4Y1W1_AGRGI Ribosomal protein L33 OS=Agrostemma githa... 49 1e-04
tr|B4Y1V9|B4Y1V9_9CARY Ribosomal protein L33 OS=Atocion rupestre... 49 1e-04
tr|B4Y1V7|B4Y1V7_9CARY Ribosomal protein L33 OS=Lychnis flos-cuc... 49 1e-04
tr|B4Y1V5|B4Y1V5_9CARY Ribosomal protein L33 OS=Lychnis flos-jov... 49 1e-04
tr|B4Y1V3|B4Y1V3_9CARY Ribosomal protein L33 OS=Petrocoptis pyre... 49 1e-04
tr|B0LP55|B0LP55_9CARY 50S ribosomal protein L33 OS=Silene atoci... 49 1e-04
tr|B0LP13|B0LP13_9CARY 50S ribosomal protein L33 OS=Silene schaf... 49 1e-04
tr|B0LNZ5|B0LNZ5_9CARY 50S ribosomal protein L33 OS=Silene pseud... 49 1e-04
tr|B0LNX1|B0LNX1_9CARY 50S ribosomal protein L33 OS=Silene fruti... 49 1e-04
tr|B0LNP4|B0LNP4_SILCO 50S ribosomal protein L33 OS=Silene conic... 49 1e-04
tr|B0LNL6|B0LNL6_9CARY 50S ribosomal protein L33 OS=Silene integ... 49 1e-04

>tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment)
OS=Trachelium caeruleum GN=rpl33 PE=3 SV=1
Length = 64

Score = 57.0 bits (136), Expect = 5e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+T+ L CT C+ + N+ STG+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 ITVILECTTCVRKGANKTSTGISRYITKKNRHNTPNRLELRKFCRYCYKHTIHGE 63


>tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment)
OS=Typha latifolia GN=rpl33 PE=3 SV=1
Length = 66

Score = 54.3 bits (129), Expect = 3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
V + L CT C+ N++S G+ + T+ NRH TP RLEL +C CH T+H E
Sbjct: 9 VRVILECTSCVRNGVNKESPGISRYITQKNRHNTPSRLELRKFCRYCHKHTIHGE 63


>tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1
Length = 66

Score = 54.3 bits (129), Expect = 3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
V + L CT C+ N++S G+ + T+ NRH TP RLEL +C CH T+H E
Sbjct: 9 VRVILECTSCVRNGVNKESPGISRYITQKNRHNTPSRLELRKFCRYCHKHTIHGE 63


>tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus bancanus
GN=rpl33 PE=4 SV=1
Length = 66

Score = 54.3 bits (129), Expect = 3e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
V I L CT C+ N++STG+ + T+ NRH TP RLEL +C C+ T+H E
Sbjct: 9 VMIILECTSCVRNGINKESTGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGE 63


>tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium
subterraneum GN=rpl33 PE=4 SV=1
Length = 66

Score = 53.5 bits (127), Expect = 5e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+T+ L CT C ++ N+KS G+ + T+ NRH TP RLEL+ +C C +H E
Sbjct: 9 ITVILECTSCDKKSVNKKSRGISRYITQKNRHNTPSRLELKKFCPFCRKHMIHAE 63


>tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinifera
GN=rpl33 PE=3 SV=1
Length = 66

Score = 52.8 bits (125), Expect = 9e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+ + L CT C+ N++STG+ + T NRH TP RLEL+ +C C+ T+H E
Sbjct: 9 IRVLLECTSCVRDGVNKESTGISRYITEKNRHNTPGRLELQKFCPYCYKHTIHGE 63


>tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment)
OS=Acorus americanus GN=rpl33 PE=3 SV=1
Length = 66

Score = 51.6 bits (122), Expect = 2e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+T+ L CT C+ N++S G+ + T+ NRH T RLEL YC C+ T+H E
Sbjct: 9 LTVILECTSCVRNGVNKESPGISRYITQKNRHNTSSRLELRKYCRYCYKHTIHGE 63


>tr|A9QAW1|A9QAW1_9APIA 50S ribosomal protein L33 (Fragment)
OS=Anethum graveolens GN=rpl33 PE=3 SV=1
Length = 66

Score = 51.6 bits (122), Expect = 2e-05
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
+T+ L CT C+ N+ STG+ + T NRH TP RLEL +C C+ +H E
Sbjct: 9 ITVILECTGCVRNDVNKVSTGISRYITEKNRHNTPNRLELRKFCPFCYKHMIHGE 63


>tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment)
OS=Yucca schidigera GN=rpl33 PE=3 SV=1
Length = 66

Score = 51.2 bits (121), Expect = 3e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
V + L CT CI N++S G+ + T+ NRH TP RL+L +C CH T++ E
Sbjct: 9 VRVILECTSCIQNGVNKESPGISRYITQKNRHNTPSRLDLRKFCRYCHKHTIYGE 63


>tr|B0LP34|B0LP34_9CARY 50S ribosomal protein L33 OS=Silene
aegyptiaca GN=rpl33 PE=3 SV=1
Length = 66

Score = 51.2 bits (121), Expect = 3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2

Query: 2 VTIAL*CTICILRTNNEKSTGLCPFTTRYNRHTTPPRLELENYCFLCHLPTLHIE 166
V + L CT C+ ++ N++S G+ + T+ NRH TP RLE +C C+ T+H E
Sbjct: 9 VKVILECTSCVRKSVNKESRGVSRYITQKNRHNTPNRLEFRKFCPYCYKHTIHGE 63