DK946135 |
Clone id |
YMU02A01NGRL0011_J09 |
Library |
YMU02 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_J09. 5' end sequence. |
Accession |
DK946135 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GCAGATGGAGTGCAGCGTGGCCTGGTGGGAGAGATCATTTCAAGGTTTGAGAGGAAAGGG TTTACTATAAAAGGACTGAAACTTTTCAGCTGTCCTGCAGCGCTTGCGGAGGAGCACTAC AAGGACCTTAGTTCTAAACCCTTCTATCCAAAGCTGGTGAAGTACATCACATCAGGACCT GTTGTTTGTTTGGCATTGGAAGGTCCGGGTGTGGTGGTTTCGGCTAGAAAGCTTATAGGT GTTACAAATCCGCTGCAAGCTGAACCTGGCACAATTCGTGGAGATCTGGGCATTGAAACT GGGAGGAATGTCATACATGGAAGCGACAGTCCCGAAAATGGCGAGCGTGAAATCGCATTG TGGTTCAAAGAGGGCGAGTTATGTGAATGGGAGCCAACCCTAACACCATGGTTACGGGAG TAGCAACATTGTCTTCAGTTTTGATTGAGTGAGCTCTTTGGGGCTGAAATTTTGCTCTCC AATTCTGTTCTCTATGTTGAGATTCAATAAATCTTCCTTGCTTGTATTTTTTTTTGGGCG TGAGAGCGAAAGTACCCGAAGAATTCTTTGCATTTTTCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q852S5 |
Definition |
sp|Q852S5|NDK2_TOBAC Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum |
Align length |
139 |
Score (bit) |
234.0 |
E-value |
2.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK946135|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0011_J09, 5' (580 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q852S5|NDK2_TOBAC Nucleoside diphosphate kinase 2, chloroplas... 234 2e-61 sp|O64903|NDK2_ARATH Nucleoside diphosphate kinase II, chloropla... 231 2e-60 sp|P47923|NDK2_PEA Nucleoside diphosphate kinase 2, chloroplasti... 230 4e-60 sp|Q01402|NDK2_SPIOL Nucleoside diphosphate kinase 2, chloroplas... 229 6e-60 sp|Q8DM56|NDK_THEEB Nucleoside diphosphate kinase OS=Thermosynec... 191 2e-48 sp|Q3M7K5|NDK_ANAVT Nucleoside diphosphate kinase OS=Anabaena va... 191 2e-48 sp|Q8YRP2|NDK_ANASP Nucleoside diphosphate kinase OS=Anabaena sp... 191 2e-48 sp|B0C4I0|NDK_ACAM1 Nucleoside diphosphate kinase OS=Acaryochlor... 188 2e-47 sp|Q56E62|NDK1_TOBAC Nucleoside diphosphate kinase 1 OS=Nicotian... 181 2e-45 sp|Q116S1|NDK_TRIEI Nucleoside diphosphate kinase OS=Trichodesmi... 181 3e-45 sp|Q9M7P6|NDK_CAPAN Nucleoside diphosphate kinase OS=Capsicum an... 180 5e-45 sp|Q5N1M1|NDK_SYNP6 Nucleoside diphosphate kinase OS=Synechococc... 179 7e-45 sp|P50590|NDK_SYNE7 Nucleoside diphosphate kinase OS=Synechococc... 179 7e-45 sp|Q2JVI1|NDK_SYNJA Nucleoside diphosphate kinase OS=Synechococc... 179 9e-45 sp|Q96559|NDK_HELAN Nucleoside diphosphate kinase OS=Helianthus ... 179 1e-44 sp|P47920|NDKB_FLABI Nucleoside diphosphate kinase B OS=Flaveria... 179 1e-44 sp|P93554|NDK1_SACOF Nucleoside diphosphate kinase 1 OS=Saccharu... 179 1e-44 sp|B0JHT4|NDK_MICAN Nucleoside diphosphate kinase OS=Microcystis... 178 2e-44 sp|P47922|NDK1_PEA Nucleoside diphosphate kinase 1 OS=Pisum sati... 177 3e-44 sp|Q07661|NDK1_ORYSJ Nucleoside diphosphate kinase 1 OS=Oryza sa... 177 3e-44 sp|A6N0M9|NDK1_ORYSI Nucleoside diphosphate kinase 1 OS=Oryza sa... 177 3e-44 sp|P39207|NDK1_ARATH Nucleoside diphosphate kinase 1 OS=Arabidop... 177 3e-44 sp|O81372|NDK1_MESCR Nucleoside diphosphate kinase 1 OS=Mesembry... 177 3e-44 sp|P47921|NDK_SOLLC Nucleoside diphosphate kinase (Fragment) OS=... 176 6e-44 sp|Q02254|NDK1_SPIOL Nucleoside diphosphate kinase 1 OS=Spinacia... 175 2e-43 sp|Q7NMQ5|NDK_GLOVI Nucleoside diphosphate kinase OS=Gloeobacter... 174 2e-43 sp|Q3AVV5|NDK_SYNS9 Nucleoside diphosphate kinase OS=Synechococc... 174 4e-43 sp|Q2JPL4|NDK_SYNJB Nucleoside diphosphate kinase OS=Synechococc... 173 5e-43 sp|Q3AFJ7|NDK_CARHZ Nucleoside diphosphate kinase OS=Carboxydoth... 173 5e-43 sp|Q7U3S1|NDK_SYNPX Nucleoside diphosphate kinase OS=Synechococc... 173 6e-43
>sp|Q852S5|NDK2_TOBAC Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1 Length = 232
Score = 234 bits (598), Expect = 2e-61 Identities = 109/139 (78%), Positives = 119/139 (85%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEIISRFE+KGF + GLKLF CP LAEEHYKDL SKPF+PKL+ YITSGPV Sbjct: 94 DGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPV 153
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 VC+A EG GVV SARKLIG TNPL AEPGTIRGDL ++TGRNV+HGSDSP+NG+REIALW Sbjct: 154 VCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALW 213
Query: 364 FKEGELCEWEPTLTPWLRE 420 F EGELC W P PWL E Sbjct: 214 FGEGELCSWTPVQEPWLIE 232
>sp|O64903|NDK2_ARATH Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2 Length = 231
Score = 231 bits (590), Expect = 2e-60 Identities = 105/139 (75%), Positives = 122/139 (87%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DG+QRGLVGEIISRFE+KGF + GLK+F CP LAEEHYKDLS+K F+P L++YITSGPV Sbjct: 93 DGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPV 152
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 VC+A EG GVV SARKLIG T+PLQAEPGTIRGDL ++TGRN++HGSDSPENG+REI LW Sbjct: 153 VCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLW 212
Query: 364 FKEGELCEWEPTLTPWLRE 420 FKEGELC+W+ L WLRE Sbjct: 213 FKEGELCKWDSALATWLRE 231
>sp|P47923|NDK2_PEA Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1 Length = 230
Score = 230 bits (586), Expect = 4e-60 Identities = 108/139 (77%), Positives = 119/139 (85%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEIISRFE+KGF + GLKLF C LAEEHYK L+ K F+PKL++YITSGPV Sbjct: 92 DGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPV 151
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V +A EG GVV SARKLIG T+PLQAEPGTIRGD ++TGRN+IHGSDSPENGEREIALW Sbjct: 152 VSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALW 211
Query: 364 FKEGELCEWEPTLTPWLRE 420 FKEGELCEW P PWLRE Sbjct: 212 FKEGELCEWTPVQEPWLRE 230
>sp|Q01402|NDK2_SPIOL Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1 Length = 233
Score = 229 bits (585), Expect = 6e-60 Identities = 104/139 (74%), Positives = 120/139 (86%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEIISRFE+KGF + GLK++ CP LAEEHYKDL +K FY KL+ YITSGPV Sbjct: 95 DGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPV 154
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 VC+A EG GVV S+RKLIG T+PLQAEPGTIRGDL ++TGRNV+HGSDSP+NG+REI LW Sbjct: 155 VCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIGLW 214
Query: 364 FKEGELCEWEPTLTPWLRE 420 FKEGE+C+W P PWLRE Sbjct: 215 FKEGEICQWTPAQAPWLRE 233
>sp|Q8DM56|NDK_THEEB Nucleoside diphosphate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ndk PE=3 SV=1 Length = 150
Score = 191 bits (485), Expect = 2e-48 Identities = 90/139 (64%), Positives = 105/139 (75%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVG II RFE+KG+T+ GLKL LAE+HY + KPF+P LV +ITSGPV Sbjct: 11 DGVQRGLVGTIIQRFEQKGYTLVGLKLMRVSRELAEQHYGEHKDKPFFPGLVNFITSGPV 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GV+ +ARKLIG TNPL AEPGT+RGD ++ GRNVIHGSDSPEN EREI LW Sbjct: 71 VAMVWEGRGVIANARKLIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAEREINLW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 F+ EL WEP LT W+ E Sbjct: 131 FQTQELVPWEPALTSWVYE 149
>sp|Q3M7K5|NDK_ANAVT Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1 Length = 149
Score = 191 bits (485), Expect = 2e-48 Identities = 88/139 (63%), Positives = 105/139 (75%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEII RFE KGFT+ GLK LAE+HY +PF+P LV++ITSGPV Sbjct: 11 DGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPV 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GV+ SARK+IG TNPL AEPGTIRGD GI GRN+IHGSD+PE ++E++LW Sbjct: 71 VAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 F + EL W+P LTPWL E Sbjct: 131 FTDAELVNWQPHLTPWLHE 149
>sp|Q8YRP2|NDK_ANASP Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1 Length = 149
Score = 191 bits (485), Expect = 2e-48 Identities = 88/139 (63%), Positives = 105/139 (75%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEII RFE KGFT+ GLK LAE+HY +PF+P LV++ITSGPV Sbjct: 11 DGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPV 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GV+ SARK+IG TNPL AEPGTIRGD GI GRN+IHGSD+PE ++E++LW Sbjct: 71 VAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 F + EL W+P LTPWL E Sbjct: 131 FTDAELVNWQPHLTPWLHE 149
>sp|B0C4I0|NDK_ACAM1 Nucleoside diphosphate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=ndk PE=3 SV=1 Length = 149
Score = 188 bits (477), Expect = 2e-47 Identities = 89/139 (64%), Positives = 106/139 (76%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEIISR+E KGFT+ GLKL LAE+HY + KPF+ LV +ITSGPV Sbjct: 11 DGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPV 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GVV +ARK+IG TNPL +EPGTIRGD GI+ GRN+IHGSD+ E +REI+LW Sbjct: 71 VAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 FK EL +W PTLT W+ E Sbjct: 131 FKSEELADWSPTLTSWIYE 149
>sp|Q56E62|NDK1_TOBAC Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1 Length = 148
Score = 181 bits (460), Expect = 2e-45 Identities = 87/139 (62%), Positives = 107/139 (76%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVGEII RFE+KGF++KGLKL + A AE+HY DLS+KPF+ LV YI SGPV Sbjct: 11 DGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPV 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GVV + RK+IG TNPL++ PGTIRGD I+ GRNVIHGSD+ E+ +EIALW Sbjct: 71 VAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 F EG + EW+ +L W+ E Sbjct: 131 FPEG-VAEWQSSLHSWIYE 148
>sp|Q116S1|NDK_TRIEI Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1 Length = 149
Score = 181 bits (458), Expect = 3e-45 Identities = 86/139 (61%), Positives = 104/139 (74%) Frame = +1
Query: 4 DGVQRGLVGEIISRFERKGFTIKGLKLFSCPAALAEEHYKDLSSKPFYPKLVKYITSGPV 183 DGVQRGLVG+IISRFE KGFT+ GLK+ + LAE+HY +PF+ L+++I SGP+ Sbjct: 11 DGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPL 70
Query: 184 VCLALEGPGVVVSARKLIGVTNPLQAEPGTIRGDLGIETGRNVIHGSDSPENGEREIALW 363 V + EG GVV SARK+IG TNPL AEPGTIRGD GI GRN+IHGSD+ E + EI LW Sbjct: 71 VAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLW 130
Query: 364 FKEGELCEWEPTLTPWLRE 420 FKE EL W+PTLT W+ E Sbjct: 131 FKEEELVSWKPTLTSWIVE 149
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q762A0 |
Definition |
tr|Q762A0|Q762A0_ORYSJ Nucleoside diphosphate kinase (Fragment) OS=Oryza sativa subsp. japonica |
Align length |
139 |
Score (bit) |
243.0 |
E-value |
6.0e-63 |
Report |
|