DK946077
Clone id YMU02A01NGRL0011_G04
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_G04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAAATGTTTGGGCCTGCGTACGCTGGGGACCCTGGCGTTCCCCACTCTGGCAAAGATGGG
TTTGCTAATCTCTTCTGGGGCTGCTTCACCTTCGCTGCAATTTCCTGGTTCAACCCATAT
TACTGGCAGTACACCAACTGCTACAACTGGCATGACTTGGCAATGGTGTGTGAGAATCAC
AGGATGAAAAGGGCCATCAAGGAGAACAAGCTTTACGAGCCTCTGTGGAATGAGTATATG
CCGAAGTTGGTGCGAGACAGTTATTTTCAGAATTGGCCAGACTATTTCCCATAGTTTATC
TGAACTGTTTCCATGACTCACTGCCATCTTGGAAGTTTATGAGGTTGGCACATTCTGGGT
GATTTTCAAGCATGAACAGGTTTTTTGGTTTTCCAGAGTGAGAGTCTATATTGAGATATT
GTAGGAGTGGAATTTAAGATTTACCGTCTTTATACTTCGTGTAAGACATTCAAGATGGGT
GCATTATAAATTTTGCTTAGGACATGTTTGGACAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q50319
Definition sp|Q50319|SYM_MYCPU Methionyl-tRNA synthetase OS=Mycoplasma pulmonis
Align length 52
Score (bit) 30.8
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946077|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_G04, 5'
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q50319|SYM_MYCPU Methionyl-tRNA synthetase OS=Mycoplasma pulm... 31 3.9
sp|Q4JBN2|NPD_SULAC NAD-dependent deacetylase OS=Sulfolobus acid... 30 5.1
sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arab... 30 6.7

>sp|Q50319|SYM_MYCPU Methionyl-tRNA synthetase OS=Mycoplasma
pulmonis GN=metG PE=3 SV=2
Length = 509

Score = 30.8 bits (68), Expect = 3.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1

Query: 118 YYWQYTNCYNWHDLAMVCENHRMKRAIKENKLYEPLWNEYMPKLVRDSYFQN 273
Y +Y Y+ D + E +K K+NK + P+ N + K+ +SYF N
Sbjct: 118 YLDKYVGLYSVSDEEFLTETQALK---KDNKFFHPVSNHELIKIEEESYFFN 166


>sp|Q4JBN2|NPD_SULAC NAD-dependent deacetylase OS=Sulfolobus
acidocaldarius GN=npdA PE=3 SV=2
Length = 252

Score = 30.4 bits (67), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1

Query: 223 LWNEYMPKLVRDSYFQNWPDYF 288
LW +Y P+L YFQ +PD F
Sbjct: 43 LWKKYSPELASIEYFQKYPDAF 64


>sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5
OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2
Length = 578

Score = 30.0 bits (66), Expect = 6.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1

Query: 124 WQYTNCYNWHDLAMVCENHRMKRAIKENKLYEPLWNE 234
W N Y + V + MK+ KE K +EP WNE
Sbjct: 473 WSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNE 509


tr_hit_id A7PT72
Definition tr|A7PT72|A7PT72_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera
Align length 97
Score (bit) 122.0
E-value 8.0e-27
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946077|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_G04, 5'
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PT72|A7PT72_VITVI Chromosome chr8 scaffold_29, whole genome... 122 8e-27
tr|A9NZ45|A9NZ45_PICSI Putative uncharacterized protein OS=Picea... 117 4e-25
tr|A9PEF9|A9PEF9_POPTR Putative uncharacterized protein OS=Popul... 110 4e-23
tr|Q6IDB3|Q6IDB3_ARATH At3g09860 (Putative uncharacterized prote... 108 1e-22
tr|A9S548|A9S548_PHYPA Predicted protein OS=Physcomitrella paten... 108 2e-22
tr|Q9SF88|Q9SF88_ARATH F8A24.9 protein OS=Arabidopsis thaliana G... 65 2e-09
tr|A3XME9|A3XME9_9FLAO Putative outer membrane protein, probably... 35 2.2
tr|B8AL51|B8AL51_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.7
tr|A6VUX3|A6VUX3_MARMS Lysine exporter protein (LYSE/YGGA) OS=Ma... 34 4.9
tr|Q10HR9|Q10HR9_ORYSJ Os03g0578200 protein OS=Oryza sativa subs... 34 4.9
tr|P92050|P92050_PERAM Lectin-related protein (Fragment) OS=Peri... 34 4.9
tr|Q7UYF9|Q7UYF9_RHOBA Sensor protein OS=Rhodopirellula baltica ... 33 6.4
tr|Q89N39|Q89N39_BRAJA Blr4003 protein OS=Bradyrhizobium japonic... 33 8.3
tr|B6UIG7|B6UIG7_MAIZE Putative uncharacterized protein OS=Zea m... 33 8.3
tr|B6UI37|B6UI37_MAIZE Putative uncharacterized protein OS=Zea m... 33 8.3

>tr|A7PT72|A7PT72_VITVI Chromosome chr8 scaffold_29, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023238001
PE=4 SV=1
Length = 99

Score = 122 bits (307), Expect = 8e-27
Identities = 50/97 (51%), Positives = 68/97 (70%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCENH 180
K FG AY GDPGVPH+ D F N++ G F+A++W NPY WQ +N +NWHD AM+ E H
Sbjct: 3 KYFGNAYRGDPGVPHADPDRFVNIWIGSIAFSALTWVNPYMWQLSNQFNWHDKAMLFEQH 62

Query: 181 RMKRAIKENKLYEPLWNEYMPKLVRDSYFQNWPDYFP 291
K+A+ + + Y+ WN+YM + +RDSY+ NWP YFP
Sbjct: 63 HWKKALAKKQPYKFKWNQYMDRDLRDSYYFNWPVYFP 99


>tr|A9NZ45|A9NZ45_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 99

Score = 117 bits (292), Expect = 4e-25
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCENH 180
K+FGPAY+GDPG+PHSGK+ F W F+ S FNPYYWQ NWHD AMV EN
Sbjct: 3 KIFGPAYSGDPGIPHSGKEMFHTTIWAPVIFSIASIFNPYYWQSATEVNWHDWAMVHENT 62

Query: 181 RMKRAIKENKLYEPLWNEYMPKLVRDSYFQNWPDYFP 291
+ KRA+K+ + YEP +N+ + K R+S++ +WP +FP
Sbjct: 63 QRKRALKKKQPYEPKFNKLLNKPQRESFYHSWPVFFP 99


>tr|A9PEF9|A9PEF9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 98

Score = 110 bits (275), Expect = 4e-23
Identities = 48/97 (49%), Positives = 65/97 (67%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCENH 180
K FG AY GDPGVPH+ D F N++ G F+ ++W NPY W TN +NWHD A + E +
Sbjct: 3 KYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSILTWSNPYLWTLTNQFNWHDKAFLFEQY 62

Query: 181 RMKRAIKENKLYEPLWNEYMPKLVRDSYFQNWPDYFP 291
K+A+K+ + Y+ WN+ M + VRDSY+ NWP YFP
Sbjct: 63 HWKKAMKKKEPYKFKWNK-MDREVRDSYYFNWPIYFP 98


>tr|Q6IDB3|Q6IDB3_ARATH At3g09860 (Putative uncharacterized protein
At3g09860) OS=Arabidopsis thaliana GN=At3g09860 PE=4
SV=1
Length = 98

Score = 108 bits (271), Expect = 1e-22
Identities = 48/97 (49%), Positives = 65/97 (67%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCENH 180
K FG AY GDPGVPH+ D F N++ G F+ ++W NPY WQ +N +N+HD M+ E +
Sbjct: 3 KYFGNAYRGDPGVPHADADRFVNIWIGSAAFSVLTWVNPYMWQLSNQFNYHDKWMLFEQY 62

Query: 181 RMKRAIKENKLYEPLWNEYMPKLVRDSYFQNWPDYFP 291
K+A + + YE WN+ +PK VRDSY+ NWP YFP
Sbjct: 63 HWKKARAKKQPYEFKWNK-IPKEVRDSYYYNWPVYFP 98


>tr|A9S548|A9S548_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_74716 PE=4 SV=1
Length = 165

Score = 108 bits (270), Expect = 2e-22
Identities = 57/143 (39%), Positives = 69/143 (48%), Gaps = 46/143 (32%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTN-------------- 138
KMFGPAY GDPGVPHS K+ F ++FWG F+A S PYYW+ N
Sbjct: 23 KMFGPAYTGDPGVPHSDKEAFGSIFWGSVAFSAYSIACPYYWEQCNNMFKWVSVFTLFLD 82

Query: 139 --CY------------------------------NWHDLAMVCENHRMKRAIKENKLYEP 222
C+ +WHDLAMV E H KRA K+ K YE
Sbjct: 83 VLCFLVDFECFPGGGFRGLCVYIALTMSLDDVYRSWHDLAMVHEQHHWKRAQKKGKDYEF 142

Query: 223 LWNEYMPKLVRDSYFQNWPDYFP 291
WN+ + K R+SY+ NW DYFP
Sbjct: 143 KWNKILNKTQRESYYHNWADYFP 165


>tr|Q9SF88|Q9SF88_ARATH F8A24.9 protein OS=Arabidopsis thaliana
GN=F8A24.9 PE=4 SV=1
Length = 102

Score = 65.1 bits (157), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1

Query: 1 KMFGPAYAGDPGVPHSGKDGFANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCE 174
K FG AY GDPGVPH+ D F N++ G F+ ++W NPY WQ +N + + L++ E
Sbjct: 3 KYFGNAYRGDPGVPHADADRFVNIWIGSAAFSVLTWVNPYMWQLSNQFKYFSLSLSLE 60


>tr|A3XME9|A3XME9_9FLAO Putative outer membrane protein, probably
involved in nutrient binding OS=Leeuwenhoekiella
blandensis MED217 GN=MED217_07701 PE=4 SV=1
Length = 542

Score = 35.0 bits (79), Expect = 2.2
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1

Query: 16 AYAGDPGVPHSGKDGF-ANLFWGCFTFAAISWFNPYYWQYTNCYNWHDLAMVCENHRMKR 192
A+ D H G D F F TF S NP W+YTN +N+H L + N +
Sbjct: 59 AFHRDANFRHRGTDMFDVPAFRLGDTFGDYSLLNPNDWRYTNFFNFHYLVIRNANTAIDA 118

Query: 193 AIKENKLY 216
A +E +Y
Sbjct: 119 ANQEGVIY 126


>tr|B8AL51|B8AL51_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12350 PE=4 SV=1
Length = 83

Score = 34.3 bits (77), Expect = 3.7
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 13/78 (16%)
Frame = +1

Query: 16 AYAGDPGVPHSGKDGFANLFWGCFTFAAISWFN-------------PYYWQYTNCYNWHD 156
AY GD GVPHS + G F A + + P+YWQ D
Sbjct: 11 AYRGDSGVPHSDSQRLVTTWTGAFALGAAACVHHHASALASNIKSLPHYWQ--------D 62

Query: 157 LAMVCENHRMKRAIKENK 210
+ M+ + R K+ +++ +
Sbjct: 63 MTMMLDQKRWKKILEKKQ 80


>tr|A6VUX3|A6VUX3_MARMS Lysine exporter protein (LYSE/YGGA)
OS=Marinomonas sp. (strain MWYL1) GN=Mmwyl1_1323 PE=4
SV=1
Length = 211

Score = 33.9 bits (76), Expect = 4.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1

Query: 85 FTFAAISWFNPYYWQYTNCYNWHDLAMVCENHRMKRAIKENK 210
F F+ I WF Y Y W AMV E H + IK +
Sbjct: 70 FWFSVIKWFGVAYLFYVGIKTWRSAAMVLEEHESEVGIKAKR 111


>tr|Q10HR9|Q10HR9_ORYSJ Os03g0578200 protein OS=Oryza sativa subsp.
japonica GN=Os03g0578200 PE=4 SV=1
Length = 83

Score = 33.9 bits (76), Expect = 4.9
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 13/78 (16%)
Frame = +1

Query: 16 AYAGDPGVPHSGKDGFANLFWGCFTFAAISWFN-------------PYYWQYTNCYNWHD 156
AY GD GVPHS + G F A + + P+YWQ D
Sbjct: 11 AYRGDSGVPHSDPQRLVTTWTGAFALGAAACVHHHASALASNIKSLPHYWQ--------D 62

Query: 157 LAMVCENHRMKRAIKENK 210
+ M+ + R K+ +++ +
Sbjct: 63 MTMMLDQKRWKKILEKKQ 80