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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK946014
Clone id YMU02A01NGRL0011_C22
Library
Length 334
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_C22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAGTGATTGAGGCATCATCAAAGGGGAAAAGCAACTATTATGAGGCAAAAGTCTTGGTAC
AAGCTTGGAGGAACATCAAGTCTTTGGAGAGTTTCAAACAGATGAAGAAGTCTGGATCTA
CGGATGTCGAAACAAATGTATAAATTAGTTTTAAGCATGATGGAGCAATCCCAATGTCTA
AGAATTTTCGAAGCATGAAGGAGCAACCCCGGTCATTGCACATATGACTGTTGTAATCTC
AACCTAGGTTGATTGTTGTCTTGTTAAGGTACATTTTCCCGGTTGTAATCTATGCATGGT
ACATGTCACAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q945Q1
Definition sp|Q945Q1|CYT1_ARATH Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana
Align length 33
Score (bit) 35.8
E-value 0.068
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946014|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_C22, 5'
         (309 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q945Q1|CYT1_ARATH Cysteine proteinase inhibitor 1 OS=Arabidop...    36   0.068
sp|Q10992|CYTA_HELAN Cysteine proteinase inhibitor A OS=Helianth...    35   0.089
sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidop...    34   0.20 
sp|Q9LEI7|CYT1_HORVU Cysteine proteinase inhibitor OS=Hordeum vu...    34   0.26 
sp|Q06445|CYTI_VIGUN Cysteine proteinase inhibitor OS=Vigna ungu...    33   0.44 
sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidop...    33   0.58 
sp|P37842|CYTM_SOLTU Multicystatin OS=Solanum tuberosum PE=2 SV=1      32   0.99 
sp|Q41906|CYT3_ARATH Cysteine proteinase inhibitor 3 OS=Arabidop...    32   0.99 
sp|P20907|CYT2_ORYSJ Cysteine proteinase inhibitor 2 OS=Oryza sa...    32   0.99 
sp|P31726|CYT1_MAIZE Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1      31   2.2  
sp|Q03196|CYT_SOLTU Cysteine proteinase inhibitor (Fragment) OS=...    30   2.9  
sp|Q84WT8|CYT4_ARATH Cysteine proteinase inhibitor 4 OS=Arabidop...    30   3.8  
sp|Q5EB47|LN28A_XENTR Lin-28 homolog A OS=Xenopus tropicalis GN=...    29   6.4  
sp|P04755|ACH3_DROME Acetylcholine receptor subunit beta-like 1 ...    29   6.4  
sp|Q86VV8|RTTN_HUMAN Rotatin OS=Homo sapiens GN=RTTN PE=2 SV=2         29   8.3  
sp|Q22695|CD5R1_CAEEL Cyclin-dependent kinase 5 activator 1 OS=C...    29   8.4  

>sp|Q945Q1|CYT1_ARATH Cysteine proteinase inhibitor 1 OS=Arabidopsis
           thaliana GN=CYS1 PE=1 SV=2
          Length = 101

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQM 104
           +E +    +  YEAKVL +AW N+K LESF  +
Sbjct: 66  VEVADGETNKVYEAKVLEKAWENLKQLESFNHL 98


>sp|Q10992|CYTA_HELAN Cysteine proteinase inhibitor A OS=Helianthus
           annuus PE=1 SV=1
          Length = 82

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGS 119
           +EA++ G    YEAKV V+ W N K L+ FK +  + S
Sbjct: 45  LEATNGGVKKTYEAKVWVKPWENFKELQEFKPVDAATS 82


>sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidopsis
           thaliana GN=CYS7 PE=2 SV=2
          Length = 232

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDVETNV*ISFKHDG 164
           +E    G+   YEAKV V+ W N K L+ FK +  S +        + FK DG
Sbjct: 102 LEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPSFTISD-----LGFKPDG 149


>sp|Q9LEI7|CYT1_HORVU Cysteine proteinase inhibitor OS=Hordeum
           vulgare GN=ICY PE=1 SV=1
          Length = 107

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           IE    G    YEAKV  +AW N K L+ FK
Sbjct: 74  IEVKEGGAKKLYEAKVWEKAWENFKQLQEFK 104


>sp|Q06445|CYTI_VIGUN Cysteine proteinase inhibitor OS=Vigna
           unguiculata PE=3 SV=1
          Length = 97

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQM 104
           +EA   G+   YEAKV  + W N K L+ FK +
Sbjct: 60  LEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHV 92


>sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidopsis
           thaliana GN=CYS6 PE=1 SV=2
          Length = 234

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           +E    G+   YEAKV V+ W N K L+ FK
Sbjct: 93  LEILEAGQKKLYEAKVWVKPWLNFKELQEFK 123


>sp|P37842|CYTM_SOLTU Multicystatin OS=Solanum tuberosum PE=2 SV=1
          Length = 756

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           + A+   K   YE K+LV+ W N K ++ FK
Sbjct: 719 LAATDARKKEIYETKILVKEWENFKEVQEFK 749



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 9   EASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           EA+  G    YEAK+L++ W ++K +  FK
Sbjct: 60  EATEGGNKKEYEAKILLRKWEDLKKVVGFK 89



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 12  ASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           A+  GK   YE K+ V+ W N K +  FK
Sbjct: 439 ATDGGKKKIYETKIWVKVWENFKKVVEFK 467



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 12  ASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           A   GK   YEAK+ V+ W N K +  FK
Sbjct: 533 AIDAGKKKIYEAKIWVKEWENFKKVIEFK 561



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 12  ASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           A+  GK   YEAK+ V+ W + K +  FK
Sbjct: 627 ATDAGKKKIYEAKIWVKEWEDFKKVVEFK 655



 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = +3

Query: 24  GKSNYYEAKVLVQAWRNIKSLESFKQM-----KKSGSTDV 128
           GK   Y+AK+ V+ W + K +  FK +     K  G TDV
Sbjct: 160 GKKKIYKAKIWVKEWEDFKKVVEFKLVGDDIAKLGGITDV 199


>sp|Q41906|CYT3_ARATH Cysteine proteinase inhibitor 3 OS=Arabidopsis
           thaliana GN=CYS3 PE=2 SV=2
          Length = 125

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQ 101
           +EA    ++  +EAKV V+ W N K L+ FK+
Sbjct: 91  LEAKEGDQTKNFEAKVWVKPWMNFKQLQEFKE 122


>sp|P20907|CYT2_ORYSJ Cysteine proteinase inhibitor 2 OS=Oryza
           sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3
          Length = 151

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 24  GKSNYYEAKVLVQAWRNIKSLESFKQM 104
           G +  YEAKV  +AW N K L+ FK +
Sbjct: 120 GANKLYEAKVWERAWENFKQLQDFKPL 146


>sp|P31726|CYT1_MAIZE Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1
          Length = 135

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGS 119
           IE         YEAKV  + W N K L+ FK +++  S
Sbjct: 97  IEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGAS 134
tr_hit_id A9SCX0
Definition tr|A9SCX0|A9SCX0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 46
Score (bit) 41.6
E-value 0.02
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK946014|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_C22, 5'
         (309 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SCX0|A9SCX0_PHYPA Predicted protein (Fragment) OS=Physcomit...    42   0.020
tr|Q8VX72|Q8VX72_RUMOB Putative cysteine proteinase inhibitor OS...    41   0.034
tr|A9PCX4|A9PCX4_POPTR Putative uncharacterized protein OS=Popul...    39   0.13 
tr|O24462|O24462_PYRCO Cysteine protease inhibitor OS=Pyrus comm...    39   0.17 
tr|A0FK05|A0FK05_POPTO Cysteine protease inhibitor OS=Populus to...    39   0.17 
tr|A0FK03|A0FK03_POPTO Cysteine protease inhibitor OS=Populus to...    39   0.17 
tr|Q0GPA4|Q0GPA4_AMAHP Cystatin OS=Amaranthus hypochondriacus GN...    38   0.22 
tr|A9TIJ1|A9TIJ1_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.22 
tr|A7PTC9|A7PTC9_VITVI Chromosome chr8 scaffold_29, whole genome...    38   0.22 
tr|Q9SE08|Q9SE08_SOLLC Cystatin (Fragment) OS=Solanum lycopersic...    38   0.29 
tr|Q7M224|Q7M224_PERAE Cystatin OS=Persea americana PE=1 SV=1          38   0.29 
tr|A5ANX3|A5ANX3_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|O04720|O04720_SOYBN Cysteine proteinase inhibitor OS=Glycine ...    37   0.38 
tr|A9P9T5|A9P9T5_POPTR Putative uncharacterized protein OS=Popul...    37   0.38 
tr|Q43635|Q43635_RICCO Cysteine proteinase inhibitor OS=Ricinus ...    37   0.50 
tr|Q8L5J8|Q8L5J8_COLES Cysteine proteinase inhibitor OS=Colocasi...    37   0.65 
tr|Q4GZT8|Q4GZT8_FRAAN Fa-CPI1 protein (Cystatin CPI-1) OS=Fraga...    37   0.65 
tr|Q5ZFY0|Q5ZFY0_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFX6|Q5ZFX6_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFX4|Q5ZFX4_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFX2|Q5ZFX2_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFW9|Q5ZFW9_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFW8|Q5ZFW8_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFW3|Q5ZFW3_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFW0|Q5ZFW0_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFV7|Q5ZFV7_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFV6|Q5ZFV6_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFV4|Q5ZFV4_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFU7|Q5ZFU7_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 
tr|Q5ZFU3|Q5ZFU3_POPTN Cysteine protease inhibitor OS=Populus tr...    36   0.85 

>tr|A9SCX0|A9SCX0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_127641 PE=4 SV=1
          Length = 214

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 3   VIEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDVETNV 140
           VIE    GK + YEAKV V+ W N K LE FK  ++   T  +  V
Sbjct: 66  VIEVEESGKLSQYEAKVWVKPWENFKKLEDFKPKEQEVFTSADLGV 111


>tr|Q8VX72|Q8VX72_RUMOB Putative cysteine proteinase inhibitor
           OS=Rumex obtusifolius PE=4 SV=1
          Length = 99

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGST 122
           +EA+  GK   YEAKV V+ W N K ++ FK +   GST
Sbjct: 60  LEATDGGKKKVYEAKVWVKPWMNFKQVQEFKLLGDQGST 98


>tr|A9PCX4|A9PCX4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 138

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDV 128
           +EA+  G +  YE KV V+ W N K L+ FK ++   S+D+
Sbjct: 92  VEATDAGNNKMYEVKVWVKPWMNFKQLQEFKHVEGGTSSDL 132


>tr|O24462|O24462_PYRCO Cysteine protease inhibitor OS=Pyrus
           communis PE=4 SV=1
          Length = 95

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKS 113
           IEA+  GK   YEAKV V+ W N K ++ FK +  S
Sbjct: 60  IEATEGGKKKVYEAKVWVKPWENFKQVQEFKPVSDS 95


>tr|A0FK05|A0FK05_POPTO Cysteine protease inhibitor OS=Populus
           tomentosa PE=2 SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDV 128
           +EA+  G +  YE KV V+ W N K L+ FK ++   S+D+
Sbjct: 92  LEATDAGNNKMYEVKVWVKPWMNFKQLQEFKHVEGGTSSDL 132


>tr|A0FK03|A0FK03_POPTO Cysteine protease inhibitor OS=Populus
           tomentosa PE=4 SV=1
          Length = 138

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDV 128
           +EA+  G +  YE KV V+ W N K L+ FK ++   S+D+
Sbjct: 92  LEATDAGNNKMYEVKVWVKPWMNFKQLQEFKHVEGGTSSDL 132


>tr|Q0GPA4|Q0GPA4_AMAHP Cystatin OS=Amaranthus hypochondriacus
           GN=CPI PE=2 SV=1
          Length = 247

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGS 119
           IEA   GK   Y+AKV V+ W N K L+ FK  + S S
Sbjct: 101 IEAIDAGKKKLYDAKVWVKPWMNFKELQEFKHTEDSPS 138


>tr|A9TIJ1|A9TIJ1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195387 PE=4 SV=1
          Length = 209

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 3   VIEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGSTDVETNV 140
           VIE         YEAKV V+ W+N K LE FK +K +G T  +  V
Sbjct: 61  VIEVEEGSSIKLYEAKVWVKPWQNFKKLEEFK-LKDAGVTSADLGV 105


>tr|A7PTC9|A7PTC9_VITVI Chromosome chr8 scaffold_29, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023307001
           PE=4 SV=1
          Length = 201

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFKQMKKSGS 119
           +EA   GK   YEAKV V+ W N K L+ FK  +++ S
Sbjct: 60  LEAIDAGKKKIYEAKVWVKPWMNFKELQEFKHSQETKS 97


>tr|Q9SE08|Q9SE08_SOLLC Cystatin (Fragment) OS=Solanum lycopersicum
           GN=STC PE=2 SV=1
          Length = 94

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +3

Query: 6   IEASSKGKSNYYEAKVLVQAWRNIKSLESFK 98
           +EA+  GK   YEAKV V+ W+N K +E FK
Sbjct: 56  LEATEGGKKKAYEAKVWVKPWQNFKQVEDFK 86