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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945612
Clone id YMU02A01NGRL0009_O07
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_O07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CTCAGTACTTCGTGCGCGCGTATGTTCTTGATTCTGCTGGAGAAAAGGTTACATATGGAC
AAAGCTCCAATGCTCAAAAGACCAGCAATCTGTTTACGATTGAGCCCATTTCAGGAAGGC
ATGCATCAATTGACATAGCCGCAGGTGTCTTTTCCGCCTTCTCTGTGGTTTCTCTTTTTG
GTTTCTTCTTCTATGAGAAGATGGGATCCAAGAAGAAGTAATTAAGCCTGATGAAGTCTA
ATAAAGCAAAGCACATCAGATGGGTCCTTGCTAAGCCTTTCAAGGACTAAAAGTTACAGA
GACTGAAGAATACATCAAGGATTTTTGCTTTGTATGTAGATTTGCACTTTTCATTGCTCT
CTATGTGGCTCTCTAGTGTGAAGCCACTCGCTTTTCATATGCGAAAAGAGTGCAAGAGTG
CTCGCCAAATTCACTCAATGGATCATTTTGAGTATCTAATGCAACATTTAATTTTCTCAT
CCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O06353
Definition sp|O06353|OTSA_MYCTU Trehalose-phosphate synthase OS=Mycobacterium tuberculosis
Align length 38
Score (bit) 30.4
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945612|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O07, 5'
         (483 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O06353|OTSA_MYCTU Trehalose-phosphate synthase OS=Mycobacteri...    30   4.4  
sp|A5U8G5|OTSA_MYCTA Trehalose-phosphate synthase OS=Mycobacteri...    30   4.4  
sp|A1KPH5|OTSA_MYCBP Trehalose-phosphate synthase OS=Mycobacteri...    30   4.4  
sp|Q7TWE1|OTSA_MYCBO Trehalose-phosphate synthase OS=Mycobacteri...    30   4.4  
sp|P18296|CUT1_SCHPO Separin OS=Schizosaccharomyces pombe GN=cut...    30   5.7  

>sp|O06353|OTSA_MYCTU Trehalose-phosphate synthase OS=Mycobacterium
           tuberculosis GN=otsA PE=1 SV=1
          Length = 500

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 183 NQKEKPQRRRKRHLRLCQLMHAFLKWAQS*TDCWSFEH 70
           NQ E+  RRR R LR   L H   +WAQS  D  +  H
Sbjct: 458 NQTEEAGRRRMRSLRRQVLAHDVDRWAQSFLDALAGAH 495


>sp|A5U8G5|OTSA_MYCTA Trehalose-phosphate synthase OS=Mycobacterium
           tuberculosis (strain ATCC 25177 / H37Ra) GN=otsA PE=3
           SV=1
          Length = 500

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 183 NQKEKPQRRRKRHLRLCQLMHAFLKWAQS*TDCWSFEH 70
           NQ E+  RRR R LR   L H   +WAQS  D  +  H
Sbjct: 458 NQTEEAGRRRMRSLRRQVLAHDVDRWAQSFLDALAGAH 495


>sp|A1KPH5|OTSA_MYCBP Trehalose-phosphate synthase OS=Mycobacterium
           bovis (strain BCG / Pasteur 1173P2) GN=otsA PE=3 SV=1
          Length = 500

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 183 NQKEKPQRRRKRHLRLCQLMHAFLKWAQS*TDCWSFEH 70
           NQ E+  RRR R LR   L H   +WAQS  D  +  H
Sbjct: 458 NQTEEAGRRRMRSLRRQVLAHDVDRWAQSFLDALAGAH 495


>sp|Q7TWE1|OTSA_MYCBO Trehalose-phosphate synthase OS=Mycobacterium
           bovis GN=otsA PE=3 SV=1
          Length = 500

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 183 NQKEKPQRRRKRHLRLCQLMHAFLKWAQS*TDCWSFEH 70
           NQ E+  RRR R LR   L H   +WAQS  D  +  H
Sbjct: 458 NQTEEAGRRRMRSLRRQVLAHDVDRWAQSFLDALAGAH 495


>sp|P18296|CUT1_SCHPO Separin OS=Schizosaccharomyces pombe GN=cut1
            PE=1 SV=3
          Length = 1828

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 339  DLHFSLLSMWLSSVKPLAFHMRKECKSARQIHSMDHFEYLMQHL 470
            D+  S  S +L   K L FH R+E +  R  H   HF  L Q L
Sbjct: 1307 DVDSSSASFFLEIPKALGFHRRREAQKFRNQHKELHFSSLEQIL 1350
tr_hit_id A7PCQ4
Definition tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera
Align length 64
Score (bit) 85.5
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945612|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_O07, 5'
         (483 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genom...    86   1e-15
tr|A5CB21|A5CB21_VITVI Putative uncharacterized protein OS=Vitis...    85   2e-15
tr|Q8S343|Q8S343_CAPAN Putative uncharacterized protein upa10 OS...    83   8e-15
tr|Q4LEX1|Q4LEX1_PHYPA Putative component of high affinity nitra...    79   1e-13
tr|A9SPC3|A9SPC3_PHYPA Predicted protein OS=Physcomitrella paten...    79   1e-13
tr|Q4LEX3|Q4LEX3_PHYPA Putative component of high affinity nitra...    78   2e-13
tr|A9SXC2|A9SXC2_PHYPA Predicted protein OS=Physcomitrella paten...    78   2e-13
tr|Q9FGS5|Q9FGS5_ARATH Genomic DNA, chromosome 5, TAC clone:K6A1...    77   4e-13
tr|Q9ARM2|Q9ARM2_ARATH Putative component of high affinity nitra...    77   4e-13
tr|Q8LE73|Q8LE73_ARATH Putative component of high affinity nitra...    77   4e-13
tr|Q9SB67|Q9SB67_ARATH Putative uncharacterized protein AT4g2472...    76   9e-13
tr|Q1G2Z1|Q1G2Z1_ARATH Putative uncharacterized protein OS=Arabi...    76   9e-13
tr|B3H755|B3H755_ARATH Uncharacterized protein At4g24730.1 OS=Ar...    76   9e-13
tr|Q4LEX2|Q4LEX2_PHYPA Putative component of high affinity nitra...    74   3e-12
tr|A9RML2|A9RML2_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|Q5UBW9|Q5UBW9_WHEAT NAR2.1 OS=Triticum aestivum GN=nar2.1 PE=...    64   5e-09
tr|Q6X678|Q6X678_HORVD NAR2.2 OS=Hordeum vulgare var. distichum ...    62   1e-08
tr|Q5UBW8|Q5UBW8_WHEAT NAR2.2 OS=Triticum aestivum GN=nar2.2 PE=...    62   1e-08
tr|Q6ZI50|Q6ZI50_ORYSJ Os02g0595900 protein OS=Oryza sativa subs...    62   2e-08
tr|A2X6R3|A2X6R3_ORYSI Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|Q6X679|Q6X679_HORVD NAR2.1 OS=Hordeum vulgare var. distichum ...    61   2e-08
tr|Q6X677|Q6X677_HORVD NAR2.3 OS=Hordeum vulgare var. distichum ...    61   2e-08
tr|Q0VH26|Q0VH26_MAIZE High affinity nitrate transporter OS=Zea ...    59   1e-07
tr|Q7XK12|Q7XK12_ORYSJ Os04g0480200 protein OS=Oryza sativa subs...    55   1e-06
tr|Q01K42|Q01K42_ORYSA OSIGBa0158F13.5 protein OS=Oryza sativa G...    55   1e-06
tr|A3AUW8|A3AUW8_ORYSJ Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|A2XUP7|A2XUP7_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|Q0VH25|Q0VH25_MAIZE High affinity nitrate transporter OS=Zea ...    52   1e-05
tr|B6SZ04|B6SZ04_MAIZE Component of high affinity nitrate transp...    52   1e-05
tr|Q2JUF3|Q2JUF3_SYNJA Membrane protein/conserved domain protein...    34   3.1  

>tr|A7PCQ4|A7PCQ4_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015965001
           PE=4 SV=1
          Length = 201

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           YF+RAY  D+  ++V YGQ+++A KT+NLF IE I+GRHAS+DIAA  FSAFSVVSL GF
Sbjct: 130 YFIRAYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVVSLCGF 189

Query: 186 FFYE 197
           F+ E
Sbjct: 190 FWVE 193


>tr|A5CB21|A5CB21_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_021663 PE=4 SV=1
          Length = 201

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 40/64 (62%), Positives = 52/64 (81%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           YF+RAY  D+  ++V YGQ+++A KT+NLF IE I+GRHAS+DIAA  FSAFSV+SL GF
Sbjct: 130 YFIRAYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVISLCGF 189

Query: 186 FFYE 197
           F+ E
Sbjct: 190 FWVE 193


>tr|Q8S343|Q8S343_CAPAN Putative uncharacterized protein upa10
           OS=Capsicum annuum GN=upa10 PE=2 SV=1
          Length = 202

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           +FVRAY+L+  G ++ YGQ+++ +K +NLF I+ ISGRHA++DI + VFSAF+VVSLFGF
Sbjct: 131 FFVRAYILNGDGHEIGYGQNTDDKKVNNLFDIQAISGRHATLDICSVVFSAFAVVSLFGF 190

Query: 186 FFYE 197
           F+ E
Sbjct: 191 FYME 194


>tr|Q4LEX1|Q4LEX1_PHYPA Putative component of high affinity nitrate
           transporter OS=Physcomitrella patens GN=Nar2;3 PE=2 SV=1
          Length = 209

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182
           +YFVRAYV +S+  ++ YGQSS   K +N FT+ PISGRH SID A GVFS FSV SLF 
Sbjct: 136 KYFVRAYVFNSSDLQIAYGQSS-PNKINNTFTVIPISGRHGSIDAAVGVFSIFSVGSLFA 194

Query: 183 FFFYE 197
           FF +E
Sbjct: 195 FFIFE 199


>tr|A9SPC3|A9SPC3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_165983 PE=4 SV=1
          Length = 209

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182
           +YFVRAYV +S+  ++ YGQSS   K +N FT+ PISGRH SID A GVFS FSV SLF 
Sbjct: 136 KYFVRAYVFNSSDLQIAYGQSS-PNKINNTFTVIPISGRHGSIDAAVGVFSIFSVGSLFA 194

Query: 183 FFFYE 197
           FF +E
Sbjct: 195 FFIFE 199


>tr|Q4LEX3|Q4LEX3_PHYPA Putative component of high affinity nitrate
           transporter OS=Physcomitrella patens GN=Nar2;1 PE=2 SV=1
          Length = 206

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182
           +YFVRAY +++ G +V  GQSS   K +N FT+ PISGRHASIDIA GV S FSV SLFG
Sbjct: 133 KYFVRAYAVNADGVQVATGQSS-PNKVANTFTVIPISGRHASIDIAVGVLSVFSVGSLFG 191

Query: 183 FFFYE 197
           FF  E
Sbjct: 192 FFILE 196


>tr|A9SXC2|A9SXC2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_216690 PE=4 SV=1
          Length = 206

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   QYFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFG 182
           +YFVRAY +++ G +V  GQSS   K +N FT+ PISGRHASIDIA GV S FSV SLFG
Sbjct: 133 KYFVRAYAVNADGVQVATGQSS-PNKVANTFTVIPISGRHASIDIAVGVLSVFSVGSLFG 191

Query: 183 FFFYE 197
           FF  E
Sbjct: 192 FFILE 196


>tr|Q9FGS5|Q9FGS5_ARATH Genomic DNA, chromosome 5, TAC clone:K6A12
           (Putative component of high affinity nitrate
           transporter) OS=Arabidopsis thaliana GN=nar2.1 PE=2 SV=1
          Length = 210

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           YFVRAY +D+ G +V YGQS++  K +NLF+++ ISGRHAS+DIA+  FS FSVV+L  F
Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196

Query: 186 FFYE 197
           F  E
Sbjct: 197 FVNE 200


>tr|Q9ARM2|Q9ARM2_ARATH Putative component of high affinity nitrate
           transporter OS=Arabidopsis thaliana GN=nar2.2 PE=2 SV=1
          Length = 210

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           YFVRAY +D+ G +V YGQS++  K +NLF+++ ISGRHAS+DIA+  FS FSVV+L  F
Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196

Query: 186 FFYE 197
           F  E
Sbjct: 197 FVNE 200


>tr|Q8LE73|Q8LE73_ARATH Putative component of high affinity nitrate
           transporter OS=Arabidopsis thaliana PE=2 SV=1
          Length = 210

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +3

Query: 6   YFVRAYVLDSAGEKVTYGQSSNAQKTSNLFTIEPISGRHASIDIAAGVFSAFSVVSLFGF 185
           YFVRAY +D+ G +V YGQS++  K +NLF+++ ISGRHAS+DIA+  FS FSVV+L  F
Sbjct: 137 YFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISGRHASLDIASICFSVFSVVALVVF 196

Query: 186 FFYE 197
           F  E
Sbjct: 197 FVNE 200