DK945226
Clone id YMU02A01NGRL0008_K03
Library
Length 294
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_K03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
CAGACTTGCTGGCACATGCCGAGAAGGAAGGATATGATGTCTCTCAGGTGAGAAAGACAA
TTCAGGATGAAGCTGCTGACTCGAGTAATCTGGAAGTGGCAAAGAAGCTGTCAGATGATC
AGGGCACGTGGTGGCTGAAATCGGTGCTTGGCAAGTAAATGCTCTTTGTATGTGATGATA
TCCTGTATTTGTGCGGCCTCATGTTAAGTCATCCTGTTGATAGCTCATTGTATTTTGAAA
TTGAATTATAAATTTCCCGAAATTCATTTGAAGCGCGAAGCCCAAAAACCTTGT
■■Homology search results ■■ -
sp_hit_id Q9UHC6
Definition sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens
Align length 62
Score (bit) 33.9
E-value 0.25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945226|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K03, 5'
(294 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Hom... 34 0.25
sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pon... 31 2.2
sp|Q6UXY8|TMC5_HUMAN Transmembrane channel-like protein 5 OS=Hom... 30 2.9
sp|P13991|TNSD_ECOLX Transposon Tn7 transposition protein tnsD O... 30 3.7
sp|Q8T773|MDH1B_BRAFL Putative malate dehydrogenase 1B OS=Branch... 29 8.2
sp|Q4JUJ8|ATPA_CORJK ATP synthase subunit alpha OS=Corynebacteri... 29 8.2

>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo
sapiens GN=CNTNAP2 PE=1 SV=1
Length = 1331

Score = 33.9 bits (76), Expect = 0.25
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = -3

Query: 259 REIYNSISKYNELSTG*LNMRPHKYRISSHTKSIYLPSTDF---SHHVP*SSDSFFATSR 89
RE YN + ++ G +PH I+ H K+I+L + S+H+P SSD+ F + +
Sbjct: 1095 REPYNIDVDHRNMANG----QPHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPK 1150

Query: 88 LL 83
L
Sbjct: 1151 SL 1152


>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo
abelii GN=CNTNAP2 PE=2 SV=1
Length = 1331

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3

Query: 259 REIYNSISKYNELSTG*LNMRPHKYRISSHTKSIYLPSTDF---SHHVP*SSDSFFATSR 89
RE YN + + ++ G +PH + H K+I L + S+H+P SSD+ F + +
Sbjct: 1095 REPYNIDTDHRNMANG----QPHSVNNTRHEKTIILKLDHYPSVSYHLPSSSDTLFNSPK 1150

Query: 88 LL 83
L
Sbjct: 1151 SL 1152


>sp|Q6UXY8|TMC5_HUMAN Transmembrane channel-like protein 5 OS=Homo
sapiens GN=TMC5 PE=2 SV=2
Length = 1006

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1

Query: 138 SATTCPDHLTASLPLPDYSSQQLHP 64
++ T PDH T SLP PDYS Q HP
Sbjct: 94 ASRTSPDHPT-SLPEPDYSEFQSHP 117


>sp|P13991|TNSD_ECOLX Transposon Tn7 transposition protein tnsD
OS=Escherichia coli GN=tnsD PE=4 SV=1
Length = 508

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3

Query: 45 QVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
+VR+T DEA + +L KL++++ T WLKS+ K
Sbjct: 245 RVRQTFSDEALEKLDL----KLAENKDTCWLKSIFRK 277


>sp|Q8T773|MDH1B_BRAFL Putative malate dehydrogenase 1B
OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1
Length = 522

Score = 28.9 bits (63), Expect = 8.2
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3

Query: 57 TIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK*M-LFVCDDILYLC--GLMLSHPV 218
TIQD S++L +A +S WW S G+ L VC + Y G++ S PV
Sbjct: 368 TIQDSLQHSADLSMAAAISSTLSYWWNGSPEGQLFSLAVCSEGFYNIPEGVVFSFPV 424


>sp|Q4JUJ8|ATPA_CORJK ATP synthase subunit alpha OS=Corynebacterium
jeikeium (strain K411) GN=atpA PE=3 SV=1
Length = 545

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3

Query: 24 KEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLG 152
++G ++ +RKT++D A VA SD G WL G
Sbjct: 211 QKGSTIASIRKTLEDHGALEYTTIVAAPASDSAGFKWLAPFTG 253


tr_hit_id Q6K623
Definition tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 47.4
E-value 0.0004
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945226|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K03, 5'
(294 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subs... 47 4e-04
tr|A2X753|A2X753_ORYSI Putative uncharacterized protein OS=Oryza... 47 4e-04
tr|Q5J0W3|Q5J0W3_CAPAN Lipocalin protein OS=Capsicum annuum PE=2... 46 8e-04
tr|A9NQ51|A9NQ51_PICSI Putative uncharacterized protein OS=Picea... 46 0.001
tr|A9NP85|A9NP85_PICSI Putative uncharacterized protein OS=Picea... 46 0.001
tr|A9NKV7|A9NKV7_PICSI Putative uncharacterized protein OS=Picea... 46 0.001
tr|Q38JD0|Q38JD0_PINTA Temperature-induced lipocalin OS=Pinus ta... 45 0.001
tr|Q38JE2|Q38JE2_SORBI Temperature-induced lipocalin-2 OS=Sorghu... 45 0.002
tr|Q38JD4|Q38JD4_SOLLC Temperature-induced lipocalin OS=Solanum ... 44 0.003
tr|Q38JC7|Q38JC7_SOLTU Temperature-induced lipocalin OS=Solanum ... 44 0.003
tr|Q8S9H0|Q8S9H0_WHEAT Temperature stress-induced lipocalin OS=T... 44 0.004
tr|Q38JB1|Q38JB1_TORRU Temperature-induced lipocalin OS=Tortula ... 44 0.005
tr|Q38JE7|Q38JE7_MAIZE Temperature-induced lipocalin-1 (Putative... 43 0.007
tr|Q38JE6|Q38JE6_SORBI Temperature-induced lipocalin-1 OS=Sorghu... 43 0.007
tr|Q38JD3|Q38JD3_SACOF Temperature-induced lipocalin OS=Saccharu... 43 0.007
tr|Q38JD1|Q38JD1_PHYPA Temperature-induced lipocalin OS=Physcomi... 43 0.007
tr|Q38JC6|Q38JC6_BRANA Temperature-induced lipocalin OS=Brassica... 43 0.007
tr|A9U3E0|A9U3E0_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007
tr|Q38JE5|Q38JE5_WHEAT Temperature-induced lipocalin-2 OS=Tritic... 43 0.009
tr|Q9FGT8|Q9FGT8_ARATH Outer membrane lipoprotein-like OS=Arabid... 42 0.012
tr|Q8LE12|Q8LE12_ARATH Outer membrane lipoprotein-like OS=Arabid... 42 0.012
tr|Q38JE3|Q38JE3_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.012
tr|A8IXT9|A8IXT9_BRACM Temperature-induced lipocalin OS=Brassica... 42 0.015
tr|Q38JC8|Q38JC8_MEDTR Putative uncharacterized protein OS=Medic... 42 0.020
tr|Q38JD7|Q38JD7_MESCR Temperature-induced lipocalin' OS=Mesembr... 41 0.026
tr|Q38JD2|Q38JD2_SOYBN Temperature-induced lipocalin OS=Glycine ... 41 0.034
tr|Q6Z9F9|Q6Z9F9_ORYSJ Os08g0440100 protein OS=Oryza sativa subs... 40 0.044
tr|Q38JE8|Q38JE8_HORVU Temperature-induced lipocalin-1 OS=Hordeu... 40 0.044
tr|Q38JE4|Q38JE4_HORVU Temperature-induced lipocalin-2 OS=Hordeu... 40 0.044
tr|Q38JC3|Q38JC3_MESCR Temperature-induced lipocalin OS=Mesembry... 40 0.044

>tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subsp.
japonica GN=OJ1004_A05.35 PE=2 SV=1
Length = 195

Score = 47.4 bits (111), Expect = 4e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL A++EGYDV ++RKT QD+ S+ +D +GTWW KS+ GK
Sbjct: 150 LLEKAKEEGYDVEKLRKTPQDDPPPESDAAP----TDTKGTWWFKSLFGK 195


>tr|A2X753|A2X753_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_08047 PE=4 SV=1
Length = 195

Score = 47.4 bits (111), Expect = 4e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL A++EGYDV ++RKT QD+ S+ +D +GTWW KS+ GK
Sbjct: 150 LLEKAKEEGYDVEKLRKTPQDDPPPESDAAP----TDTKGTWWFKSLFGK 195


>tr|Q5J0W3|Q5J0W3_CAPAN Lipocalin protein OS=Capsicum annuum PE=2
SV=1
Length = 184

Score = 46.2 bits (108), Expect = 8e-04
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
L+ + EGYDVS++RKT Q ++ S + DD+G WW+KS+LGK
Sbjct: 140 LVEKGKAEGYDVSKLRKTPQSDSPPSEDGP-----KDDKGIWWIKSILGK 184


>tr|A9NQ51|A9NQ51_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 182

Score = 45.8 bits (107), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL HA++EGYDV ++ KT Q+ D+ E K D+G WW+K+++GK
Sbjct: 140 LLEHAQQEGYDVKRLHKTTQN---DNPETEAPK----DKGFWWIKALIGK 182


>tr|A9NP85|A9NP85_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 182

Score = 45.8 bits (107), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL HA++EGYDV ++ KT Q+ D+ E K D+G WW+K+++GK
Sbjct: 140 LLEHAQQEGYDVKRLHKTTQN---DNPETEAPK----DKGFWWIKALIGK 182


>tr|A9NKV7|A9NKV7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 182

Score = 45.8 bits (107), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL HA++EGYDV ++ KT Q+ D+ E K D+G WW+K+++GK
Sbjct: 140 LLEHAQQEGYDVKRLHKTTQN---DNPETEAPK----DKGFWWIKALIGK 182


>tr|Q38JD0|Q38JD0_PINTA Temperature-induced lipocalin OS=Pinus taeda
GN=TIL PE=2 SV=1
Length = 182

Score = 45.4 bits (106), Expect = 0.001
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
LL HA +EGYDV ++ KT Q+ D E K D+G WW+K++LGK
Sbjct: 140 LLEHARQEGYDVGRLHKTTQN---DDPETEAPK----DKGFWWIKALLGK 182


>tr|Q38JE2|Q38JE2_SORBI Temperature-induced lipocalin-2 OS=Sorghum
bicolor GN=TIL-2 PE=2 SV=1
Length = 187

Score = 44.7 bits (104), Expect = 0.002
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3

Query: 3 DLLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
+L+ A++EGYDVS++RKT + S ++ D+G WW+KS+ GK
Sbjct: 142 ELVERAKEEGYDVSKLRKTAHPDPPPES-----EQSPGDRGVWWIKSIFGK 187


>tr|Q38JD4|Q38JD4_SOLLC Temperature-induced lipocalin OS=Solanum
lycopersicum GN=TIL PE=2 SV=1
Length = 185

Score = 44.3 bits (103), Expect = 0.003
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
L+ A++EGYDVS++ KT Q ++ S D +G WW+KS+LGK
Sbjct: 140 LVEKAKEEGYDVSKLHKTPQSDSPPDSE----DSPKDTKGIWWIKSILGK 185


>tr|Q38JC7|Q38JC7_SOLTU Temperature-induced lipocalin OS=Solanum
tuberosum GN=TIL PE=2 SV=1
Length = 185

Score = 44.3 bits (103), Expect = 0.003
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3

Query: 6 LLAHAEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 155
L+ A++EGYDVS++ KT Q ++ S D +G WW+KS+LGK
Sbjct: 140 LVEKAKEEGYDVSKLHKTPQSDSPPESE----DSPEDTKGIWWIKSILGK 185