DK945021
Clone id YMU02A01NGRL0007_P06
Library
Length 368
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_P06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GGCGTGCATGTTAGGGTATTCAATTGTTAACATTTTCCAATGCTGCTGGCGCCTGATATG
GTATGCCTGAATTTGTGACAAGCAGCAAGTGCTTGCACTATTTCGAAGTTGCTTCAAGTG
TAACAGAGGCTTAGTTTTTTGTCCTATTTTTTAAAACTACAGAAGAACCCATTTGTGCTC
TTACCCATTTACTTCTCTGTGAAGTCGGTGGGGATTTTTGGAGCACATGATGGCTTATAT
AGTCAGTAGCGTTGACGGTGAGCTGTCTTTTGAAGAGCTATCATGTGAATGGTTATCTTA
GACCTTAAATCTATGGTATTGTCAGTTCCATGGGTCCATAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id P11717
Definition sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate receptor OS=Homo sapiens
Align length 16
Score (bit) 32.0
E-value 0.99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945021|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_P06, 5'
(339 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate rece... 32 0.99
sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate rece... 31 1.7
sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate rece... 31 1.7
sp|O00268|TAF4_HUMAN Transcription initiation factor TFIID subun... 30 2.9

>sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate
receptor OS=Homo sapiens GN=IGF2R PE=1 SV=2
Length = 2491

Score = 32.0 bits (71), Expect = 0.99
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFE 107
G PEFVT+++C+HYFE
Sbjct: 139 GTPEFVTATECVHYFE 154


>sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate
receptor OS=Mus musculus GN=Igf2r PE=1 SV=1
Length = 2483

Score = 31.2 bits (69), Expect = 1.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFE 107
G PEFVT++ C+HYFE
Sbjct: 134 GTPEFVTATDCVHYFE 149


>sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate
receptor OS=Bos taurus GN=IGF2R PE=1 SV=2
Length = 2499

Score = 31.2 bits (69), Expect = 1.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFE 107
G PEFVT++ C+HYFE
Sbjct: 145 GTPEFVTATDCVHYFE 160


>sp|O00268|TAF4_HUMAN Transcription initiation factor TFIID subunit
4 OS=Homo sapiens GN=TAF4 PE=1 SV=2
Length = 1085

Score = 30.4 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3

Query: 268 RQLTVNATDYISHHVLQKSPPTSQRSKWVRAQMGSSVVLKNRTKN*ASVT 119
RQLT ++ +I Q PPTSQ + + A + SS V + K A+VT
Sbjct: 665 RQLTPDSAAFIQQSQQQPPPPTSQATTALTAVVLSSSVQRTAGKTAATVT 714


tr_hit_id Q95MJ2
Definition tr|Q95MJ2|Q95MJ2_MACRG Mannose-6-phosphate/insulin-like growth factor II receptor (Fragment) OS=Macropus rufogriseus
Align length 21
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945021|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_P06, 5'
(339 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q95MJ2|Q95MJ2_MACRG Mannose-6-phosphate/insulin-like growth f... 34 4.2
tr|Q4SGS4|Q4SGS4_TETNG Chromosome 14 SCAF14590, whole genome sho... 33 9.3
tr|Q4SGS3|Q4SGS3_TETNG Chromosome 14 SCAF14590, whole genome sho... 33 9.3
tr|Q9N170|Q9N170_DIDMA Mannose 6 phosphate/insulin-like growth f... 33 9.3
tr|Q95MJ0|Q95MJ0_TUPGL Mannose-6-phosphate/insulin-like growth f... 33 9.3
tr|Q95LC8|Q95LC8_DIDMA Mannose-6-phosphate/insulin-like growth f... 33 9.3

>tr|Q95MJ2|Q95MJ2_MACRG Mannose-6-phosphate/insulin-like growth
factor II receptor (Fragment) OS=Macropus rufogriseus
GN=m6p/igf2r PE=2 SV=1
Length = 2358

Score = 33.9 bits (76), Expect = 4.2
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFEVASSV 122
G PEFVTS++C+HYFE ++V
Sbjct: 72 GTPEFVTSTECVHYFEWRTTV 92


>tr|Q4SGS4|Q4SGS4_TETNG Chromosome 14 SCAF14590, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00018498001 PE=4 SV=1
Length = 2493

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3

Query: 30 TFSNAAGA*YGMPEFVTSSKCLHYFE 107
+FS G G PEFV S+C+HYFE
Sbjct: 83 SFSFLCGKTMGTPEFVAVSQCVHYFE 108


>tr|Q4SGS3|Q4SGS3_TETNG Chromosome 14 SCAF14590, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00018499001 PE=4 SV=1
Length = 1389

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3

Query: 30 TFSNAAGA*YGMPEFVTSSKCLHYFE 107
+FS G G PEFV S+C+HYFE
Sbjct: 83 SFSFLCGKTMGTPEFVAVSQCVHYFE 108


>tr|Q9N170|Q9N170_DIDMA Mannose 6 phosphate/insulin-like growth
factor 2 receptor (Fragment) OS=Didelphis marsupialis
virginiana PE=2 SV=1
Length = 550

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFEVASSV 122
G PEFVTS+ C+HYFE ++V
Sbjct: 86 GTPEFVTSTGCVHYFEWRTTV 106


>tr|Q95MJ0|Q95MJ0_TUPGL Mannose-6-phosphate/insulin-like growth
factor II receptor (Fragment) OS=Tupaia glis
GN=m6p/igf2r PE=2 SV=1
Length = 2425

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFEVASSV 122
G PEFVT+++C+HYFE ++V
Sbjct: 84 GTPEFVTATECVHYFEWKTAV 104


>tr|Q95LC8|Q95LC8_DIDMA Mannose-6-phosphate/insulin-like growth
factor II receptor OS=Didelphis marsupialis virginiana
GN=m6p/igf2r PE=2 SV=1
Length = 2511

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3

Query: 60 GMPEFVTSSKCLHYFEVASSV 122
G PEFVTS+ C+HYFE ++V
Sbjct: 154 GTPEFVTSTGCVHYFEWRTTV 174