DK944834
Clone id YMU02A01NGRL0007_F10
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_F10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCAGGATCCACAGTACCAAGCACCGAAGTACCCGCAGCATCAGTACCAGCATTTCCTGCC
ATACATCAAGCAGCAAATGTTTGTCGATTAGAAACCTTGCAACACATCAAAGAATGGAGT
GGTGCTTCTCTTGAGAGTGCATAAGTCTCTCATATCATCACTAGCCCTACAAATTTGCGT
TCAAGAGCACGGTAATCCAATGCTCGTAAAATGATAAAAACAAAGCTGTATAATTTTTGA
TTTCCCTTAAATCATCAAGCTAGCATAGAGAGTAATCTGTCTAAAGACACAATCTCGTGT
CTGACCAGTCCATTAGGAGCTGGTGTCTTACATGACGACTCTATGTCAATTTGTAGGGTC
GTGCGTCCTAATTGAGCAAGAGAAAACCATGATCTTGAATCAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O93967
Definition sp|O93967|PALY_AMAMU Phenylalanine ammonia-lyase OS=Amanita muscaria
Align length 45
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944834|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F10, 5'
(401 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O93967|PALY_AMAMU Phenylalanine ammonia-lyase OS=Amanita musc... 30 4.9
sp|Q07755|NODC_AZOC5 N-acetylglucosaminyltransferase OS=Azorhizo... 29 8.3
sp|Q55F68|CYAD_DICDI Adenylate cyclase, terminal-differentiation... 29 8.3

>sp|O93967|PALY_AMAMU Phenylalanine ammonia-lyase OS=Amanita
muscaria GN=PAL PE=2 SV=1
Length = 740

Score = 29.6 bits (65), Expect = 4.9
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1

Query: 302 RHEIVSLDRLLSMLA**FKGNQKLYSFVFIILRALDYRALERKFV 168
R I SL+ L S++A S+++I+ +ALD RAL+R+F+
Sbjct: 523 RATITSLEVLTSLIA----------SYLYILCQALDLRALQREFL 557


>sp|Q07755|NODC_AZOC5 N-acetylglucosaminyltransferase
OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=nodC PE=3 SV=2
Length = 397

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2

Query: 59 PYIKQQMFVD*KPCNTSKNGVVLLLRVHKSLISSLALQICVQEHGNPMLV 208
PY++QQ+ + ++ L LR+ K+L + +IC Q G +L+
Sbjct: 272 PYLRQQL----RWARSTYRDTALALRIKKNLSKYITFEICAQNLGTALLL 317


>sp|Q55F68|CYAD_DICDI Adenylate cyclase, terminal-differentiation
specific OS=Dictyostelium discoideum GN=acrA PE=1 SV=1
Length = 2123

Score = 28.9 bits (63), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2

Query: 2 QDPQYQAPKYPQHQYQHFLPYIKQQ 76
Q PQ Q + Q+QYQH L Y +QQ
Sbjct: 1981 QQPQQQQQQQIQNQYQHQLQYQRQQ 2005


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944834|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F10, 5'
(401 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******