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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944379
Clone id YMU02A01NGRL0005_N22
Library
Length 316
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_N22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
AACTCAGAAGATGATACAGATAACGTTTATACTCTCGTGCATTGTTCACGTTGGGGAGGG
TGGGTATGCGTGGTTACTGGCAAAAAGAGTCGATCCCGCAAATGCCAATGGGTGGTTTTG
GCAGACATTCTTTGTAGGCTTTCCCTCTCTCTTACTTCTGAGAAGTCGAGCCCGGCATCT
GAGTAAGTCTTGACTCACCAGCAATGAGAGTGCTCATTTAACAGGTACCTCTCAGCTGCA
TATAGATATGTTGATTTTTATTCCATTTTTGTATACATTGAACTCCCNAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q55DB6
Definition sp|Q55DB6|AHSA_DICDI Activator of 90 kDa heat shock protein ATPase homolog OS=Dictyostelium discoideum
Align length 24
Score (bit) 32.7
E-value 0.57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944379|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N22, 5'
         (288 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55DB6|AHSA_DICDI Activator of 90 kDa heat shock protein ATPa...    33   0.57 
sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATP...    31   1.7  
sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATP...    31   1.7  
sp|Q5R9A6|CJ057_PONAB Transmembrane protein C10orf57 homolog OS=...    31   2.2  
sp|Q9DCV5|CJ057_MOUSE Transmembrane protein C10orf57 homolog OS=...    31   2.2  
sp|Q8TBM7|CJ057_HUMAN Transmembrane protein C10orf57 OS=Homo sap...    31   2.2  
sp|Q5U220|CJ057_RAT Transmembrane protein C10orf57 homolog OS=Ra...    30   2.8  
sp|Q92247|BLI4_NEUCR Putative oxidoreductase bli-4, mitochondria...    30   3.7  
sp|A1SYX8|URED_PSYIN Urease accessory protein ureD OS=Psychromon...    30   4.8  
sp|P19712|POLG_CSFVA Genome polyprotein OS=Classical swine fever...    29   8.2  
sp|Q5RAD0|CO7_PONAB Complement component C7 OS=Pongo abelii GN=C...    29   8.2  
sp|P19505|POL_SIVSP Gag-Pol polyprotein OS=Simian immunodeficien...    29   8.3  
sp|P12502|POL_SIVS4 Gag-Pol polyprotein OS=Simian immunodeficien...    29   8.3  
sp|P05897|POL_SIVMK Gag-Pol polyprotein OS=Simian immunodeficien...    29   8.3  
sp|P05896|POL_SIVM1 Gag-Pol polyprotein OS=Simian immunodeficien...    29   8.3  
sp|P12451|POL_HV2SB Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P04584|POL_HV2RO Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P05962|POL_HV2NZ Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P18042|POL_HV2G1 Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P15833|POL_HV2D2 Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P17757|POL_HV2D1 Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|P24107|POL_HV2CA Gag-Pol polyprotein OS=Human immunodeficienc...    29   8.3  
sp|Q8N9S3|AHSA2_MOUSE Activator of 90 kDa heat shock protein ATP...    29   8.3  
sp|A6QQC0|AHSA2_BOVIN Activator of 90 kDa heat shock protein ATP...    29   8.3  

>sp|Q55DB6|AHSA_DICDI Activator of 90 kDa heat shock protein ATPase
           homolog OS=Dictyostelium discoideum GN=ahsa PE=2 SV=1
          Length = 383

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 50  VGEGGYAWLLAKRVDPANANGWFW 121
           VGEG   W++  R D  N NGW W
Sbjct: 4   VGEGDPRWIVENREDGHNVNGWHW 27


>sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATPase
           homolog 1 OS=Mus musculus GN=Ahsa1 PE=2 SV=2
          Length = 338

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 53  GEGGYAWLLAKRVDPANANGWFW 121
           GEG   W++ +R D  N N W W
Sbjct: 5   GEGDPRWIVEERADATNVNNWHW 27


>sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATPase
           homolog 1 OS=Homo sapiens GN=AHSA1 PE=1 SV=1
          Length = 338

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 53  GEGGYAWLLAKRVDPANANGWFW 121
           GEG   W++ +R D  N N W W
Sbjct: 5   GEGDPRWIVEERADATNVNNWHW 27


>sp|Q5R9A6|CJ057_PONAB Transmembrane protein C10orf57 homolog
           OS=Pongo abelii PE=2 SV=1
          Length = 123

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 32  LSCIVHVGEGGYAWLLAKRVDPANANG---WFWQTFFVG 139
           L+ ++HVGE  YA +L K     +      WF QTFF G
Sbjct: 67  LAWLIHVGESLYAIVLCKHKGITSGRAQLLWFLQTFFFG 105


>sp|Q9DCV5|CJ057_MOUSE Transmembrane protein C10orf57 homolog OS=Mus
           musculus GN=D14Ertd449e PE=2 SV=1
          Length = 123

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 32  LSCIVHVGEGGYAWLLAKRVDPANANG---WFWQTFFVG 139
           L+ ++HVGE  YA +L KR    +      WF QTF  G
Sbjct: 67  LAWLIHVGESLYALVLCKRKGITDVQAQLLWFLQTFLFG 105


>sp|Q8TBM7|CJ057_HUMAN Transmembrane protein C10orf57 OS=Homo
           sapiens GN=C10orf57 PE=2 SV=1
          Length = 123

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 32  LSCIVHVGEGGYAWLLAKRVDPANANG---WFWQTFFVG 139
           L+ ++HVGE  YA +L K     +      WF QTFF G
Sbjct: 67  LAWLIHVGESLYAIVLCKHKGITSGRAQLLWFLQTFFFG 105


>sp|Q5U220|CJ057_RAT Transmembrane protein C10orf57 homolog
           OS=Rattus norvegicus PE=2 SV=1
          Length = 123

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 32  LSCIVHVGEGGYAWLLAKRVDPANANG---WFWQTFFVG 139
           L+ +VHVGE  YA +L +R    ++     WF QTF  G
Sbjct: 67  LAWLVHVGESLYALVLCRRKGITDSQAQLLWFLQTFLFG 105


>sp|Q92247|BLI4_NEUCR Putative oxidoreductase bli-4, mitochondrial
           OS=Neurospora crassa GN=bli-4 PE=1 SV=1
          Length = 412

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +1

Query: 7   EDDTDNVYTLVHCSRWGGWVCVVTGKKSRSRKCQWVVLADILCRLSLSLTSEKSSPAS 180
           E     VY +   +  G W+C     ++ +   Q   LAD L  L+  + SEK+ P S
Sbjct: 341 EGAVPTVYAVTMANEGGQWICAPAKAEAGTDLAQSDELADNLMELTRKIISEKTWPKS 398


>sp|A1SYX8|URED_PSYIN Urease accessory protein ureD OS=Psychromonas
           ingrahamii (strain 37) GN=ureD PE=3 SV=2
          Length = 308

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 183 LRCRARLLRSKREGKPTKNVCQNHPLAFAGSTLFASNHAYPP 58
           L C A+L+   R      N    HP   AG+T+FA+  AY P
Sbjct: 183 LFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAP 224


>sp|P19712|POLG_CSFVA Genome polyprotein OS=Classical swine fever
           virus (strain Alfort) PE=1 SV=2
          Length = 3898

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +1

Query: 34  LVHCSRWGGWVCV----VTGKKSRSRKCQW 111
           L HC   G W CV    VT K  + ++C+W
Sbjct: 866 LFHCKLGGNWTCVKGDPVTYKGGQVKQCRW 895
tr_hit_id A7QPG5
Definition tr|A7QPG5|A7QPG5_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera
Align length 43
Score (bit) 67.0
E-value 4.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944379|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_N22, 5'
         (288 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QPG5|A7QPG5_VITVI Chromosome chr18 scaffold_137, whole geno...    67   4e-10
tr|Q6ZHP8|Q6ZHP8_ORYSJ Os02g0715200 protein OS=Oryza sativa subs...    66   8e-10
tr|B7FM12|B7FM12_MEDTR Putative uncharacterized protein OS=Medic...    64   5e-09
tr|O22813|O22813_ARATH Putative steroid dehydrogenase (At2g33630...    60   5e-08
tr|B4FG67|B4FG67_MAIZE Putative uncharacterized protein OS=Zea m...    60   7e-08
tr|A9STX1|A9STX1_PHYPA Predicted protein OS=Physcomitrella paten...    59   1e-07
tr|A9SBL1|A9SBL1_PHYPA Predicted protein OS=Physcomitrella paten...    51   3e-05
tr|B8AHL9|B8AHL9_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015
tr|A3AAP6|A3AAP6_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.015
tr|Q4QE21|Q4QE21_LEIMA Putative uncharacterized protein OS=Leish...    35   1.4  
tr|A4HXP7|A4HXP7_LEIIN Putative uncharacterized protein OS=Leish...    35   1.4  
tr|A4H9C6|A4H9C6_LEIBR Putative uncharacterized protein OS=Leish...    35   1.4  
tr|B4RIR2|B4RIR2_PHEZH Transcriptional regulator, LysR family OS...    34   3.2  
tr|Q6D494|Q6D494_ERWCT Putative uncharacterized protein OS=Erwin...    34   4.2  
tr|Q01GC7|Q01GC7_OSTTA DNA alkylation damage repair protein (ISS...    33   5.5  
tr|Q015D0|Q015D0_OSTTA AHA1, activator of heat shock 90kDa prote...    33   7.1  
tr|A4RRA4|A4RRA4_OSTLU Predicted protein OS=Ostreococcus lucimar...    33   7.1  
tr|Q4PCV2|Q4PCV2_USTMA Putative uncharacterized protein OS=Ustil...    33   9.3  

>tr|A7QPG5|A7QPG5_VITVI Chromosome chr18 scaffold_137, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002931001
           PE=4 SV=1
          Length = 478

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVG 139
           +I++ F+L+   H+GE  YAW LAKRVDPANA GWFWQTF +G
Sbjct: 423 IIRVVFLLATAAHIGEAVYAWHLAKRVDPANARGWFWQTFALG 465


>tr|Q6ZHP8|Q6ZHP8_ORYSJ Os02g0715200 protein OS=Oryza sativa subsp.
           japonica GN=OJ1191_G08.12 PE=2 SV=1
          Length = 478

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVGF 142
           +I++ F+++  +HVGE  YAW LAK+ DP NA GWFWQTF +GF
Sbjct: 423 VIRLVFVIATALHVGEAVYAWFLAKKYDPRNATGWFWQTFMLGF 466


>tr|B7FM12|B7FM12_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 239

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVGF 142
           M ++ FI++  VH  E  YAW LAKRVDP NA GWFWQTF +GF
Sbjct: 184 MTRLVFIIATAVHFIEAIYAWYLAKRVDPVNARGWFWQTFALGF 227


>tr|O22813|O22813_ARATH Putative steroid dehydrogenase
           (At2g33630/F4P9.40) OS=Arabidopsis thaliana GN=At2g33630
           PE=2 SV=1
          Length = 480

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   TQKMIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVGF 142
           T  +++  FI++ ++HV EG YAW LAKRVDP NA GWF QT  +GF
Sbjct: 419 TITIVKAVFIVAVVLHVAEGIYAWFLAKRVDPGNAMGWFLQTSALGF 465


>tr|B4FG67|B4FG67_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 479

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVGF 142
           +I++   ++  +H GE  YAW LA+RVDP NA GWFWQTF +G+
Sbjct: 424 VIRLVLAVAIALHAGEAVYAWFLARRVDPRNAAGWFWQTFALGY 467


>tr|A9STX1|A9STX1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_215702 PE=4 SV=1
          Length = 487

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 22/48 (45%), Positives = 34/48 (70%)
 Frame = +2

Query: 2   TQKMIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVGFP 145
           +Q+ ++I   L+C+ H+ EG YAW++A + D  NA GWFWQT  +G+P
Sbjct: 423 SQETLRIILYLACLAHLLEGIYAWIVAMKADRKNARGWFWQTLALGYP 470


>tr|A9SBL1|A9SBL1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163976 PE=4 SV=1
          Length = 225

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 2   TQKMIQITFILSCIVHVGEGGYAWLLAKRVDPANANGWFWQTFFVG 139
           T +++Q    +  ++HV E  YAW LA RVDP N   WFWQT ++G
Sbjct: 163 TPQVLQSVLYVGVVLHVLEATYAWYLAGRVDPHNQTLWFWQTLYLG 208


>tr|B8AHL9|B8AHL9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08687 PE=4 SV=1
          Length = 477

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANA 106
           +I++ F+++  +HVGE  YAW LAK+ DP NA
Sbjct: 423 VIRLVFVIATALHVGEAVYAWFLAKKYDPRNA 454


>tr|A3AAP6|A3AAP6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007868 PE=4 SV=1
          Length = 506

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +2

Query: 11  MIQITFILSCIVHVGEGGYAWLLAKRVDPANA 106
           +I++ F+++  +HVGE  YAW LAK+ DP NA
Sbjct: 452 VIRLVFVIATALHVGEAVYAWFLAKKYDPRNA 483


>tr|Q4QE21|Q4QE21_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LmjF18.0210 PE=4 SV=1
          Length = 351

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 50  VGEGGYAWLLAKRVDPANANGWFWQ 124
           VGEG   W++++R D AN N W W+
Sbjct: 4   VGEGDPRWIVSERTDGANVNSWHWE 28