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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944327
Clone id YMU02A01NGRL0005_L06
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_L06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GTGCAAGGCCTTCATCGGCTGCCACAGAGATACCAATAGATCTGGATGGGCTTGAAGGTG
GAAGCACAAGTCAAAATCCTCAAATGGAGGCGGCAGAGCAAGTGGAGCTTGATGGGATTT
GCGAGAGGAAGGTAAAGCCGTCAAAACGGTCTTCTTTAGGTTCAGTTGCTCGCACGATGG
GTGATGGCATGAGGGAGATGTGGGCAGCTTATGAGCGAGCAGAGGAGAAAAGGACGGCAA
CCTTGCGAGAGCTAGAGATGAACAGGACGGCACATGAAGAGAGGCTTGTCCGTATCAAAG
AAGAGGAAGAGACGAGGCGACAGCAAATGTTCTTTGCTACGCAGTTAGAGATCGCAAAAC
TCCTTGCTAGGAGGCAGGACTAATGCGGAGGTTGTGTTGATTGTGTGCAGTGTATTCCAG
ACCTTGCAGATTTTCAGGTAGAGATGAGCAGGTCATCGACAGATGTTCCAATGCAGGCAG
TTTTATCTTTGTAGTGTTTTTTCCATAGCTCTCCTTGAGCTATTTTCTTTAGTCTGTATC
TCAATTGATACGTTTTTTT
■■Homology search results ■■ -
sp_hit_id Q8N412
Definition sp|Q8N412|CD037_HUMAN Uncharacterized protein C4orf37 OS=Homo sapiens
Align length 93
Score (bit) 30.8
E-value 4.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944327|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L06, 5'
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N412|CD037_HUMAN Uncharacterized protein C4orf37 OS=Homo sa...    31   4.7  
sp|A7MB40|K1931_BOVIN Uncharacterized protein KIAA1931 ortholog ...    30   6.2  

>sp|Q8N412|CD037_HUMAN Uncharacterized protein C4orf37 OS=Homo
           sapiens GN=C4orf37 PE=2 SV=1
          Length = 459

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = -2

Query: 351 SLTA*QRTFAVASSLPLL*YGQASLHVPSCSSLALARLPSFSPLLAHK--LPTSPSCHHP 178
           SLTA + TF +ASS+      + ++  P   +++ A+  S SP L     +P+ PSC   
Sbjct: 44  SLTARESTFTIASSI------EKAVPGPGHYNVSEAQKISRSPTLTRSVDVPSIPSCGKS 97

Query: 177 SCEQLNLKKTVLTALPSSRKSHQAPLALPPPFE 79
               +N   +++   P +  S   P    P F+
Sbjct: 98  YGYHINDDGSIIKCFPPACDSTLGPAYYKPQFD 130


>sp|A7MB40|K1931_BOVIN Uncharacterized protein KIAA1931 ortholog
           OS=Bos taurus PE=2 SV=1
          Length = 823

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
 Frame = -2

Query: 276 HVPSCSSLALARLPSF-SPLLAHKLPTSPSCHHPSCEQLNLKKTVLTALPSSRKSHQAP- 103
           H P  + L  +   SF SP   H LPT+P+ H P+  Q++     + A P +    Q+P 
Sbjct: 253 HHPQPAPLIPSHPGSFGSPPHPHLLPTTPAVHFPA--QVSECPVAVAAAPHTPGPCQSPH 310

Query: 102 --------LALPPPF 82
                   L +PPPF
Sbjct: 311 LPSTSMPLLKMPPPF 325
tr_hit_id Q0PW22
Definition tr|Q0PW22|Q0PW22_POPTO Leucine-rich repeat receptor-like kinase OS=Populus tomentosa
Align length 53
Score (bit) 36.2
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944327|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_L06, 5'
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0PW22|Q0PW22_POPTO Leucine-rich repeat receptor-like kinase ...    36   1.2  
tr|A7VM45|A7VM45_MARPO Receptor-like kinase OS=Marchantia polymo...    35   2.7  
tr|Q5QNK4|Q5QNK4_ORYSJ Putative uncharacterized protein P0515G01...    35   2.8  
tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole geno...    35   2.8  
tr|A9U422|A9U422_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.6  
tr|A7PNC8|A7PNC8_VITVI Chromosome chr1 scaffold_22, whole genome...    34   4.6  
tr|A5BQD1|A5BQD1_VITVI Putative uncharacterized protein OS=Vitis...    34   4.6  
tr|A7PSA9|A7PSA9_VITVI Chromosome chr14 scaffold_27, whole genom...    34   4.7  
tr|A5ASS9|A5ASS9_VITVI Putative uncharacterized protein OS=Vitis...    34   4.7  
tr|B6Q1K2|B6Q1K2_PENMA Putative uncharacterized protein OS=Penic...    34   4.7  
tr|A5CA72|A5CA72_VITVI Putative uncharacterized protein (Chromos...    33   7.9  
tr|B7DIS2|B7DIS2_DESSA Putative uncharacterized protein OS=Desul...    33   8.1  
tr|B7BZF6|B7BZF6_9FIRM Putative uncharacterized protein OS=Roseb...    33   8.1  

>tr|Q0PW22|Q0PW22_POPTO Leucine-rich repeat receptor-like kinase
           OS=Populus tomentosa GN=SERK1 PE=2 SV=1
          Length = 622

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +3

Query: 81  QMEAAEQVELDGICERKVKPSKRSSLGSVARTM-GDGMREMWAAYERAEEKRT 236
           ++E  E V++  +C + + PS R  +  V R + GDG+ E W A +RAEE R+
Sbjct: 540 RIELEEIVQVALLCTQYL-PSHRPKMSEVVRMLEGDGLAEKWEASQRAEESRS 591


>tr|A7VM45|A7VM45_MARPO Receptor-like kinase OS=Marchantia
           polymorpha GN=MpRLK29 PE=2 SV=1
          Length = 620

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 81  QMEAAEQVELDGICERKVKPSKRSSLGSVARTM-GDGMREMWAAYERAEEKRT 236
           ++E  E V++  +C + V P+ R  +  V R + GDG+ E W  + R+E +R+
Sbjct: 539 KVELEEMVQVALLCTQ-VSPTDRPKMAEVVRMLEGDGLAERWETWRRSESRRS 590


>tr|Q5QNK4|Q5QNK4_ORYSJ Putative uncharacterized protein P0515G01.32
           OS=Oryza sativa subsp. japonica GN=P0515G01.32 PE=4 SV=1
          Length = 121

 Score = 35.0 bits (79), Expect = 2.8
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
 Frame = -2

Query: 270 PSCSSLALARLPSF-------SPLLAHKLPTSPSCHHPSCEQLNLKKTV----LTALPSS 124
           P+ SSL+L+ LPSF       SP     LP SP   HP C +    +      LTAL   
Sbjct: 12  PTASSLSLSLLPSFPKVARGKSPFPLSFLPFSPRRRHPPCRRFGCDRRAPARSLTALGRF 71

Query: 123 RKSHQAPL-ALPPPF 82
              H  P+    PPF
Sbjct: 72  PNRHCPPIKPRRPPF 86


>tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000042001
           PE=4 SV=1
          Length = 206

 Score = 35.0 bits (79), Expect = 2.8
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 237 PSFSPLLAHKLPTSPSCHHPSCEQLNLKKTVLTALPSSRKS-HQAPLALPPPFE 79
           P+FSPLL H + T      P+ + ++ +K   T  P   K    +PLA PPP +
Sbjct: 37  PTFSPLLIHSMATQKPTLPPASKTISSRK-ASTVFPLGEKGPRSSPLATPPPIK 89


>tr|A9U422|A9U422_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_61917 PE=4 SV=1
          Length = 626

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 69  SQNPQMEAAEQVELDGICERKVKPSKRSSLGSVARTM-GDGMREMWAAYERAEEKRT 236
           S+   +E  E V++  +C + V PS+R  +  VAR + GDG+ E W  +   E +R+
Sbjct: 542 SEYNSLELEEMVQVALLCTQ-VLPSERPKMLDVARMLEGDGLAERWEQWREVENRRS 597


>tr|A7PNC8|A7PNC8_VITVI Chromosome chr1 scaffold_22, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021194001
           PE=4 SV=1
          Length = 625

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 81  QMEAAEQVELDGICERKVKPSKRSSLGSVARTM-GDGMREMWAAYERAEEKR 233
           ++E  E V++  +C + + PS R  +  V R + GDG+ E W A +RAE  R
Sbjct: 543 RIELEEMVQVALLCTQYL-PSHRPKMSEVVRMLEGDGLAEKWEATQRAEATR 593


>tr|A5BQD1|A5BQD1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025883 PE=4 SV=1
          Length = 609

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 81  QMEAAEQVELDGICERKVKPSKRSSLGSVARTM-GDGMREMWAAYERAEEKR 233
           ++E  E V++  +C + + PS R  +  V R + GDG+ E W A +RAE  R
Sbjct: 527 RIELEEMVQVALLCTQYL-PSHRPKMSEVVRMLEGDGLAEKWEATQRAEATR 577


>tr|A7PSA9|A7PSA9_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022835001
           PE=3 SV=1
          Length = 1205

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
 Frame = -2

Query: 489 KIKLPALEHLSMTCSSLPENLQGLEYTAHNQHNLRISPAS*QGVLRSLTA*QRTFAVASS 310
           ++KL A EH+   C SL E ++ LE     +   R+   +     R++ A       +SS
Sbjct: 478 QLKLAAREHI---CRSLQEKVRDLENQLAEERKTRLKQET-----RAIAAACPKPPASSS 529

Query: 309 L---PLL*YGQASLHVPSCSSLALARLPSF----SPLLAHKLPTSPSCHHPSC-EQLNLK 154
           L   PL    +    +PS   + L R+ +F    SP+  HK  +S S H  S  ++ N+ 
Sbjct: 530 LLKQPLKTIAEKKPPLPSKPRMPLRRISNFLPPPSPIPPHKTMSSSSIHPASTDDKENML 589

Query: 153 KTVLTALPSSRKSHQAP------LALPP 88
           +T  TA  ++ KS   P      + LPP
Sbjct: 590 RT--TAAATNTKSFLQPRRTSFAVRLPP 615


>tr|A5ASS9|A5ASS9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018287 PE=3 SV=1
          Length = 726

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
 Frame = -2

Query: 489 KIKLPALEHLSMTCSSLPENLQGLEYTAHNQHNLRISPAS*QGVLRSLTA*QRTFAVASS 310
           ++KL A EH+   C SL E ++ LE     +   R+   +     R++ A       +SS
Sbjct: 440 QLKLAAREHI---CRSLQEKVRDLENQLAEERKTRLKQET-----RAIAAACPKPPASSS 491

Query: 309 L---PLL*YGQASLHVPSCSSLALARLPSF----SPLLAHKLPTSPSCHHPSC-EQLNLK 154
           L   PL    +    +PS   + L R+ +F    SP+  HK  +S S H  S  ++ N+ 
Sbjct: 492 LLKQPLKTIAEKKPPLPSKPRMPLRRISNFLPPPSPIPPHKTMSSSSIHPASTDDKENML 551

Query: 153 KTVLTALPSSRKSHQAP------LALPP 88
           +T  TA  ++ KS   P      + LPP
Sbjct: 552 RT--TAAATNTKSFLQPRRTSFAVRLPP 577


>tr|B6Q1K2|B6Q1K2_PENMA Putative uncharacterized protein
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_027100 PE=4
           SV=1
          Length = 403

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 282 SLHVPSCSSLALARLPSFSPLLAHKLPTSPSCHHPSCEQLN--LKKTVLTALPSSRKSHQ 109
           S H  S S L+ + +PS  P+LAH   +S + HH      +  L  T L +L S R+ HQ
Sbjct: 47  SAHGQSTSYLSSSSVPSTPPILAHSRASSRTRHHRRTRSSSHALSDTDLRSLASRREIHQ 106