DK944325 |
Clone id |
YMU02A01NGRL0005_L03 |
Library |
YMU02 |
Length |
545 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_L03. 5' end sequence. |
Accession |
DK944325 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
ACCACACGAGAGGGAGAGAGAGAGCGCAGAGCGTATGTGAGCTAGCTTTGGTGTTCCTAG AGTCCTGGGATGAATTTACAAAACGTTCTGTCGATCTTTTCCAATCATAGCCTCTCTGGA CCCGTTATGTCATGTAGTACCGCCATTGTGATGGAAAGCTGGTCTTGAAGGTCACTGACG ATCGCGTGTGCCTGAAGTACATTACAGACCATCTCCTAGATGCCAAGAAGATGGAGAAAC TTAACAACATTTTCTTCACTATTATGGCACGCGGCCCCTAAGCTGACATCACTGAATATT TTTCAAAGGATTCTGCTTTGGTTCCACCTGCCAAGAAAGGCAGGGGAAGGAGACAATAGG AATACCTGAAATTTTGCTGATTCAGGTCATCAGCTTGTAACTGATTGTTGATATACCAGA CTCTCATTGAACCTTGTTTGCTATCAATAGAAAATTGGACATGCAGCACTACCCGCCTAT ATATCCTGAGCCACTTTTCAGTTGTTGCGTACTCAATTTGGTGGGCATTTATACGATTTG TTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SMU7 |
Definition |
sp|Q9SMU7|SRP09_ARATH Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana |
Align length |
103 |
Score (bit) |
137.0 |
E-value |
3.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PUM9 |
Definition |
tr|A7PUM9|A7PUM9_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
103 |
Score (bit) |
145.0 |
E-value |
2.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944325|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0005_L03, 5' (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PUM9|A7PUM9_VITVI Chromosome chr7 scaffold_31, whole genome... 145 2e-33 tr|B6TGI8|B6TGI8_MAIZE Signal recognition particle 9 kDa protein... 138 2e-31 tr|Q0WS60|Q0WS60_ARATH Signal recognition particle subunit 9-lik... 137 3e-31 tr|B4FJ28|B4FJ28_MAIZE Putative uncharacterized protein OS=Zea m... 137 3e-31 tr|A9SHL1|A9SHL1_PHYPA Predicted protein OS=Physcomitrella paten... 137 3e-31 tr|A9TJC0|A9TJC0_PHYPA Predicted protein OS=Physcomitrella paten... 134 2e-30 tr|A9P8V6|A9P8V6_POPTR Putative uncharacterized protein OS=Popul... 131 2e-29 tr|Q652F6|Q652F6_ORYSJ Putative signal recognition particle 9 kD... 129 1e-28 tr|A6MZW6|A6MZW6_ORYSI Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|B6PU92|B6PU92_BRAFL Putative uncharacterized protein OS=Branc... 88 3e-16 tr|B7Q3G1|B7Q3G1_IXOSC Signal recognition particle, subunit Srp9... 84 5e-15 tr|A8IY91|A8IY91_CHLRE Subunit of the signal recognition particl... 81 3e-14 tr|B3SAJ3|B3SAJ3_TRIAD Putative uncharacterized protein OS=Trich... 74 4e-12 tr|A4IIH7|A4IIH7_XENTR Signal recognition particle 9 OS=Xenopus ... 74 5e-12 tr|Q7ZW94|Q7ZW94_DANRE Signal recognition particle 9 OS=Danio re... 73 9e-12 tr|B5XC93|B5XC93_SALSA Signal recognition particle 9 kDa protein... 73 9e-12 tr|Q6AZS9|Q6AZS9_XENLA MGC81742 protein OS=Xenopus laevis GN=MGC... 72 1e-11 tr|B5XCY6|B5XCY6_SALSA Signal recognition particle 9 kDa protein... 72 1e-11 tr|B5XFS5|B5XFS5_SALSA Signal recognition particle 9 kDa protein... 72 2e-11 tr|B5XEA4|B5XEA4_SALSA Signal recognition particle 9 kDa protein... 70 7e-11 tr|B6P167|B6P167_BRAFL Putative uncharacterized protein (Fragmen... 70 7e-11 tr|Q5ZHT7|Q5ZHT7_CHICK Putative uncharacterized protein OS=Gallu... 70 1e-10 tr|Q0DD40|Q0DD40_ORYSJ Os06g0257200 protein (Fragment) OS=Oryza ... 70 1e-10 tr|Q4SRE3|Q4SRE3_TETNG Chromosome undetermined SCAF14527, whole ... 69 1e-10 tr|A3BAE1|A3BAE1_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|Q5EAT0|Q5EAT0_MOUSE Putative uncharacterized protein OS=Mus m... 66 1e-09 tr|Q3UIK3|Q3UIK3_MOUSE Putative uncharacterized protein OS=Mus m... 66 1e-09 tr|A8K0N0|A8K0N0_HUMAN cDNA FLJ76514, highly similar to Homo sap... 66 1e-09 tr|A8X339|A8X339_CAEBR Putative uncharacterized protein OS=Caeno... 64 5e-09 tr|A8NNV0|A8NNV0_BRUMA Signal recognition particle 9 kDa protein... 63 1e-08
>tr|A7PUM9|A7PUM9_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023864001 PE=4 SV=1 Length = 103
Score = 145 bits (365), Expect = 2e-33 Identities = 71/103 (68%), Positives = 83/103 (80%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V++ESWDEF RSV LF++ P TRYVM YRHCDGKLVLKVTD+R CLK+ TD DAK Sbjct: 1 MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNNIFFT+MARGP DI+E K++ V PAKKGRGR+Q Sbjct: 61 KMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRKQ 103
>tr|B6TGI8|B6TGI8_MAIZE Signal recognition particle 9 kDa protein OS=Zea mays PE=4 SV=1 Length = 103
Score = 138 bits (348), Expect = 2e-31 Identities = 68/103 (66%), Positives = 79/103 (76%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V+++SWDEF +RSV LF+ P TRYVM YRHC+GKLVLKVTDDR CLK+ TD DAK Sbjct: 1 MVYVDSWDEFVERSVQLFRGDPNATRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNNIFF +M RGP DI+E K+ A AKKGRGRRQ Sbjct: 61 KMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103
>tr|Q0WS60|Q0WS60_ARATH Signal recognition particle subunit 9-like OS=Arabidopsis thaliana GN=At3g49100 PE=4 SV=1 Length = 103
Score = 137 bits (346), Expect = 3e-31 Identities = 66/103 (64%), Positives = 80/103 (77%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V++ SWDEF RSV LF++ P TRYVM YRHCDGKLVLKVTD++ CLK+ TD +AK Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNNIFFT+MARGP D++E K+ PAKKGRGR+Q Sbjct: 61 KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
>tr|B4FJ28|B4FJ28_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 103
Score = 137 bits (346), Expect = 3e-31 Identities = 68/103 (66%), Positives = 79/103 (76%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V+++SWDEF +RSV LF++ P TRYVM YRHC+GKLVLKVTDDR CLK+ TD DAK Sbjct: 1 MVYVDSWDEFVERSVQLFRADPNTTRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNNIFF +M RGP ADI+E K A KKGRGRRQ Sbjct: 61 KMEKLNNIFFALMTRGPDADISEVSEKGQAEQQQPKKGRGRRQ 103
>tr|A9SHL1|A9SHL1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212428 PE=4 SV=1 Length = 103
Score = 137 bits (346), Expect = 3e-31 Identities = 65/103 (63%), Positives = 81/103 (78%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V++E+WD+F RS LF+S P+ TRYVM YRHCDGKLVLKVTDD+VCLK+ TD D + Sbjct: 1 MVYIENWDDFQARSSALFRSDPVATRYVMKYRHCDGKLVLKVTDDKVCLKFKTDQAQDIR 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNN FF++MARGP A++ E K+ PP+KKGRGRRQ Sbjct: 61 KMEKLNNTFFSMMARGPDAEVPEDLPKELVAPPPSKKGRGRRQ 103
>tr|A9TJC0|A9TJC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60409 PE=4 SV=1 Length = 103
Score = 134 bits (338), Expect = 2e-30 Identities = 61/103 (59%), Positives = 82/103 (79%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V++E+W++F +R++ LF+S P+ TRYVM YRHCDGKLVLKVTDD+VCLK+ T H D + Sbjct: 1 MVYIENWEDFQERAIVLFRSDPVATRYVMKYRHCDGKLVLKVTDDKVCLKFKTVHAQDIR 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNN FF++MARGP ++ E K+ PP++KGRGRRQ Sbjct: 61 KMEKLNNTFFSMMARGPDVEVPEDLPKEPVAPPPSRKGRGRRQ 103
>tr|A9P8V6|A9P8V6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 103
Score = 131 bits (330), Expect = 2e-29 Identities = 62/103 (60%), Positives = 78/103 (75%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V++ SWD+F RSV LF++ P TRYVM YRHCDGKLVLKVTD++ CLK+ TD D K Sbjct: 1 MVYITSWDDFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDVK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLNN+FFT+M+RGP AD++E K+ KKGRGR+Q Sbjct: 61 KMEKLNNLFFTLMSRGPDADVSEVTGKEQTEARAGKKGRGRKQ 103
>tr|Q652F6|Q652F6_ORYSJ Putative signal recognition particle 9 kDa protein OS=Oryza sativa subsp. japonica GN=P0624H09.23-1 PE=4 SV=1 Length = 103
Score = 129 bits (324), Expect = 1e-28 Identities = 62/103 (60%), Positives = 78/103 (75%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V+ +SWDEF +SV+LF++ P TRYV+ YRHC+GKLVLKVTD+ CLK+ TD DAK Sbjct: 1 MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHECLKFKTDQAQDAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLN IFFT+M GP ADI++ K+ A +KKGRGRRQ Sbjct: 61 KMEKLNTIFFTLMTHGPDADISDVSGKEQAEQQQSKKGRGRRQ 103
>tr|A6MZW6|A6MZW6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22419 PE=4 SV=1 Length = 103
Score = 129 bits (324), Expect = 1e-28 Identities = 62/103 (60%), Positives = 78/103 (75%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 +V+ +SWDEF +SV+LF++ P TRYV+ YRHC+GKLVLKVTD+ CLK+ TD DAK Sbjct: 1 MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHECLKFKTDQAQDAK 60
Query: 228 KMEKLNNIFFTIMARGP*ADITEYFSKDSALVPPAKKGRGRRQ 356 KMEKLN IFFT+M GP ADI++ K+ A +KKGRGRRQ Sbjct: 61 KMEKLNTIFFTLMTHGPDADISDVSGKEQAEQQQSKKGRGRRQ 103
>tr|B6PU92|B6PU92_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_274292 PE=4 SV=1 Length = 78
Score = 88.2 bits (217), Expect = 3e-16 Identities = 39/74 (52%), Positives = 56/74 (75%) Frame = +3
Query: 48 LVFLESWDEFTKRSVDLFQS*PLWTRYVM*YRHCDGKLVLKVTDDRVCLKYITDHLLDAK 227 + ++ SW+EF K + L+Q+ P+ R+V+ YRH DGKLVLKVTDD+VCL+Y T+H D K Sbjct: 1 MTYITSWEEFAKAAERLYQADPVKCRFVVKYRHSDGKLVLKVTDDQVCLQYRTEHAQDVK 60
Query: 228 KMEKLNNIFFTIMA 269 K+EKLN++ +MA Sbjct: 61 KLEKLNSLMMRLMA 74
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