DK943515
Clone id YMU02A01NGRL0003_B07
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_B07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TGGCTTGCAAAGCTGAGATTAGACAAGGATGTTGAACAGATGTCTGTAGAGGTGGAAAGG
CGGTTAGAACGAAAAGCGTACGCGGCCAAGAAGTGGAGCAAGAATGCATATGTACCTGCT
TCATACTGCCTATGAGGAACACTTAGGGAAGCAAGGTAAATAGTTGAATGTGTGTGCGCC
TGGTGTTGAAAAGTGTTTCCTGCTTCAATGCAAAAGAGACGTCCACAAAAATTCTTCTGA
GCAGCAGGAAGCACGGGCCTTCTATGATTGACTTGGCGAGTGCTGTGCATGCTCGACCAG
TTTGTAACAATCTATCAAGAAGAGGTGTTGAGGGAGAGAAAAGGATTTGGGAATTGGGGG
GGTGTGCATCTTCTACAGAAAGCAATGCTCTCTGTTTTGCGGTTGTTGAAGTCCCTATGT
TGAGTCCATGCTGCTAGCATCAGCAACAGCTTGCGAAAGTCAATGTTCTAATTCCTTGGT
GTTTGGGC
■■Homology search results ■■ -
sp_hit_id Q5B0Y5
Definition sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Emericella nidulans
Align length 69
Score (bit) 33.5
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
(473 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysi... 33 0.49
sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori... 31 3.2
sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori... 30 5.4

>sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3
lysine-4 specific OS=Emericella nidulans GN=set1 PE=3
SV=1
Length = 1220

Score = 33.5 bits (75), Expect = 0.49
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3

Query: 441 SQAVADASSMDST*GLQQPQ-NREHCFL*KMHTPPIPKSFSLPQHLFLIDCYKLVEHAQH 265
S + A A + D G +Q + N + + +HTPP P + SL Q + ++ KLV
Sbjct: 130 SPSQAKAPNGDEPDGFRQARANVSNSTMTPLHTPPTPTTHSLSQRVAIVKGSKLVHDPDR 189

Query: 264 SPSQS*KAR 238
+PS+ + R
Sbjct: 190 APSKDKRKR 198


>sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori
J99 GN=iscS PE=3 SV=1
Length = 387

Score = 30.8 bits (68), Expect = 3.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3

Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
P ++ + VH P +S RG+EGE +W+L + + + C
Sbjct: 283 PDVMVVGDRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSAC 328


>sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori
GN=iscS PE=3 SV=1
Length = 387

Score = 30.0 bits (66), Expect = 5.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3

Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
P ++ + +H P +S RG+EGE +W+L + + + C
Sbjct: 283 PDVMVVGDRIHRVPNTTLVSVRGIEGEAMLWDLNRSNIAASTGSAC 328


tr_hit_id Q4FVX1
Definition tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin
Align length 49
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
(473 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leish... 35 1.9
tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate tran... 35 2.4
tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase OS=Methyloba... 35 2.4
tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase OS=Methyl... 33 7.1
tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family OS... 33 7.1
tr|B0U993|B0U993_METS4 Putative uncharacterized protein OS=Methy... 33 9.3
tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantia... 33 9.3
tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family OS... 33 9.3

>tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein
OS=Leishmania major strain Friedlin GN=LMJ_1430 PE=4
SV=1
Length = 896

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2

Query: 409 LNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTAL 263
L I STTA++R LL + HPP++ SP+ D + AC AL
Sbjct: 682 LGIAVSTTARERLLLGLSPTHPPSAVPPHSPACVGEDAYQECVTACAAL 730


>tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate
transposon OS=Bacteroides thetaiotaomicron GN=BT_2604
PE=4 SV=1
Length = 235

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1

Query: 272 HSTRQVNHRRPVLPAAQKNFCGRLFCIEAGNTFQHQAHTHSTIYLAS 132
H R N + +A + FCGRLFC AG + ++H H+ + S
Sbjct: 23 HLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRS 69


>tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase
OS=Methylobacterium sp. (strain 4-46) GN=M446_6099 PE=4
SV=1
Length = 482

Score = 34.7 bits (78), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2

Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
+ +VH+H W R + PP++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIDAARGRPPIRTAVVHPC 187


>tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase
OS=Methylobacterium nodulans ORS 2060 GN=Mnod_0409 PE=4
SV=1
Length = 480

Score = 33.1 bits (74), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2

Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
+ +VH+H W R + P++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIAAAQGLAPIRTAVVHPC 187


>tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family
OS=Chloroflexus aggregans DSM 9485 GN=Cagg_2268 PE=4
SV=1
Length = 339

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -2

Query: 418 QHGLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
+ GL IGT A++ +DA P Q LF P + + + + GR C L +I+EG
Sbjct: 268 ERGLTIGTDL-----AIIGFDDA--PMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEG 319


>tr|B0U993|B0U993_METS4 Putative uncharacterized protein
OS=Methylobacterium sp. (strain 4-46) GN=M446_0810 PE=4
SV=1
Length = 930

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3

Query: 198 KETSTKILLSSRKHGPSMIDLASAVHARPVCNNLSRRGVEGEKRIW 335
+E+ K+ HG + + V ARPV N + R GE+R+W
Sbjct: 818 RESIAKVRQFFEAHGDTRFEQIGDVEARPVTNRVGWRKGHGEERVW 863


>tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_2023
PE=4 SV=1
Length = 341

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2

Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
GL IGT A++ +DA P Q LF P T + + + G C L S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321


>tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family
OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0152 PE=4
SV=1
Length = 341

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2

Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
GL IGT A++ +DA P Q LF P T + + + G C L S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321