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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921773
Clone id YMU001_000154_A04
Library
Length 367
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGGTGGTGGTTGATCATGCTGTCCTATAATCACTTCCGGCGACGTACAGACGAAAACAC
ACAAATAACTGCAATCTAACACTTAGCAATACTTTTAGTACTTCAAAAGAACTATGAGAG
AGAGAGAGAGAAAGAAAATCTATTAACATCCTGTGGAGGCCAAAGCTAACCTATAGGACA
AAACCGATACATCTTTGGTTACATTCCACTTCGGGTATCATAAAAGGAAAATGAGTGCAT
GTGCAAAACATAACCTCATTGCTCTCATGACTCATGAGAGCTAGGTTTACAATGGTAAGA
AATCACCGTGTTCATACTGTGTCTACATCTATAGAAGACCTAAGTCCATGTCTTTGTGGG
AATGGAT
■■Homology search results ■■ -
sp_hit_id A6TGM5
Definition sp|A6TGM5|PEPQ_KLEP7 Xaa-Pro dipeptidase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Align length 43
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921773|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_A04.
         (350 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6TGM5|PEPQ_KLEP7 Xaa-Pro dipeptidase OS=Klebsiella pneumonia...    31   2.2  
sp|A4WFX3|PEPQ_ENT38 Xaa-Pro dipeptidase OS=Enterobacter sp. (st...    30   2.8  
sp|Q9ZDZ8|Y165_RICPR Uncharacterized protein RP165 OS=Rickettsia...    29   8.2  
sp|Q3YVC0|PEPQ_SHISS Xaa-Pro dipeptidase OS=Shigella sonnei (str...    29   8.2  
sp|Q83PG0|PEPQ_SHIFL Xaa-Pro dipeptidase OS=Shigella flexneri GN...    29   8.2  
sp|Q0SZ37|PEPQ_SHIF8 Xaa-Pro dipeptidase OS=Shigella flexneri se...    29   8.2  
sp|Q32A22|PEPQ_SHIDS Xaa-Pro dipeptidase OS=Shigella dysenteriae...    29   8.2  
sp|Q31UE2|PEPQ_SHIBS Xaa-Pro dipeptidase OS=Shigella boydii sero...    29   8.2  
sp|Q7CPD4|PEPQ_SALTY Xaa-Pro dipeptidase OS=Salmonella typhimuri...    29   8.2  
sp|Q9L6L4|PEPQ_SALTI Xaa-Pro dipeptidase OS=Salmonella typhi GN=...    29   8.2  
sp|A9MYB1|PEPQ_SALPB Xaa-Pro dipeptidase OS=Salmonella paratyphi...    29   8.2  
sp|Q5PKQ1|PEPQ_SALPA Xaa-Pro dipeptidase OS=Salmonella paratyphi...    29   8.2  
sp|Q57HM5|PEPQ_SALCH Xaa-Pro dipeptidase OS=Salmonella choleraes...    29   8.2  
sp|Q1R465|PEPQ_ECOUT Xaa-Pro dipeptidase OS=Escherichia coli (st...    29   8.2  
sp|P21165|PEPQ_ECOLI Xaa-Pro dipeptidase OS=Escherichia coli (st...    29   8.2  
sp|B1IW60|PEPQ_ECOLC Xaa-Pro dipeptidase OS=Escherichia coli (st...    29   8.2  
sp|Q8FBI1|PEPQ_ECOL6 Xaa-Pro dipeptidase OS=Escherichia coli O6 ...    29   8.2  
sp|Q0TAK9|PEPQ_ECOL5 Xaa-Pro dipeptidase OS=Escherichia coli O6:...    29   8.2  
sp|A1AI34|PEPQ_ECOK1 Xaa-Pro dipeptidase OS=Escherichia coli O1:...    29   8.2  
sp|A8A6V2|PEPQ_ECOHS Xaa-Pro dipeptidase OS=Escherichia coli O9:...    29   8.2  
sp|Q8X8I1|PEPQ_ECO57 Xaa-Pro dipeptidase OS=Escherichia coli O15...    29   8.2  
sp|A7ZU52|PEPQ_ECO24 Xaa-Pro dipeptidase OS=Escherichia coli O13...    29   8.2  

>sp|A6TGM5|PEPQ_KLEP7 Xaa-Pro dipeptidase OS=Klebsiella pneumoniae
           subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
           GN=pepQ PE=3 SV=1
          Length = 443

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K  TS + +H  +H+R      KH L+  M+ E+ V N    P
Sbjct: 289 KAGTSYIDYHIQFHQRIAKLLRKHQLVTDMSEEAMVENDLTGP 331


>sp|A4WFX3|PEPQ_ENT38 Xaa-Pro dipeptidase OS=Enterobacter sp.
           (strain 638) GN=pepQ PE=3 SV=1
          Length = 443

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K  TS V +H  +H+R      KH ++  M+ E+ V N    P
Sbjct: 289 KAGTSYVDYHIQFHQRIAKLLRKHQIVTDMSEEAMVENDLTGP 331


>sp|Q9ZDZ8|Y165_RICPR Uncharacterized protein RP165 OS=Rickettsia
           prowazekii GN=RP165 PE=4 SV=1
          Length = 368

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 106 RERKKIY*HPVEAKANL*DKTDTSLVTFHFGYHKRKMSACAKHNLIA 246
           +E K I+      KA++ D  D +L+TFH+  +K K++     N+I+
Sbjct: 81  KETKTIHIASAGTKADINDIWDDALITFHYAPNKLKIAQKFVDNIIS 127


>sp|Q3YVC0|PEPQ_SHISS Xaa-Pro dipeptidase OS=Shigella sonnei (strain
           Ss046) GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q83PG0|PEPQ_SHIFL Xaa-Pro dipeptidase OS=Shigella flexneri
           GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q0SZ37|PEPQ_SHIF8 Xaa-Pro dipeptidase OS=Shigella flexneri
           serotype 5b (strain 8401) GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q32A22|PEPQ_SHIDS Xaa-Pro dipeptidase OS=Shigella dysenteriae
           serotype 1 (strain Sd197) GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q31UE2|PEPQ_SHIBS Xaa-Pro dipeptidase OS=Shigella boydii
           serotype 4 (strain Sb227) GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q7CPD4|PEPQ_SALTY Xaa-Pro dipeptidase OS=Salmonella typhimurium
           GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331


>sp|Q9L6L4|PEPQ_SALTI Xaa-Pro dipeptidase OS=Salmonella typhi
           GN=pepQ PE=3 SV=1
          Length = 443

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 163 KTDTSLVTFHFGYHKRKMSACAKHNLIALMTHES*VYNGKKSP 291
           K   S V +H  +H+R      KH +I  M+ E+ V N    P
Sbjct: 289 KAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGP 331
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921773|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_A04.
         (350 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******