BP921766 |
Clone id |
YMU001_000153_H07 |
Library |
YMU01 |
Length |
216 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000153_H07. |
Accession |
BP921766 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1594Contig1 |
Sequence |
ACAATCTGCGCCGGTATGGATGGATAGTTCCAGCATACACAATGGCACCTGATGCAGAAC ATATATGTCTATAGAGGGTGGTCGTGAGGGAGGACTTTAGTTGCACATTAGCCCAACGCC TTGTTGAGGACATCCGCAAAGTTCTGGACTATCTCGACGCACGGGCACCCAAGCTTGTTG AGGCGGTGGCAGTTGCTATTGCTCAAAAAGAACCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54767 |
Definition |
sp|P54767|DCE_SOLLC Glutamate decarboxylase OS=Solanum lycopersicum |
Align length |
58 |
Score (bit) |
84.3 |
E-value |
2.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RXP9 |
Definition |
tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
68 |
Score (bit) |
101.0 |
E-value |
2.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921766|Adiantum capillus-veneris mRNA, clone: YMU001_000153_H07. (216 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella paten... 101 2e-20 tr|A9SDK9|A9SDK9_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|B6TT27|B6TT27_MAIZE Glutamate decarboxylase OS=Zea mays PE=2 ... 87 6e-16 tr|Q7XJB3|Q7XJB3_SOYBN Putative glutamate decarboxylase (Fragmen... 84 3e-15 tr|B1Q3F0|B1Q3F0_SOLLC Glutamate decarboxylase isoform1 OS=Solan... 84 3e-15 tr|A8C8H5|A8C8H5_SOYBN Glutamate decarboxylase OS=Glycine max GN... 84 3e-15 tr|A8C8H3|A8C8H3_SOYBN Glutamate decarboxylase OS=Glycine max GN... 84 3e-15 tr|Q8LLP2|Q8LLP2_ORYSJ Putative glutamate carboxylase OS=Oryza s... 82 2e-14 tr|Q6ASV4|Q6ASV4_ORYSJ Os03g0720300 protein OS=Oryza sativa subs... 82 2e-14 tr|B8AQQ2|B8AQQ2_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|B8AQP6|B8AQP6_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A9RI73|A9RI73_PHYPA Predicted protein (Fragment) OS=Physcomit... 82 2e-14 tr|B4F972|B4F972_MAIZE Glutamate decarboxylase OS=Zea mays PE=2 ... 81 2e-14 tr|A9RGP7|A9RGP7_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-14 tr|A7QSV8|A7QSV8_VITVI Chromosome undetermined scaffold_163, who... 81 2e-14 tr|A7PTR5|A7PTR5_VITVI Chromosome undetermined scaffold_30, whol... 81 2e-14 tr|A0EJ89|A0EJ89_PINPS Glutamate decarboxylase OS=Pinus pinaster... 81 2e-14 tr|A7P433|A7P433_VITVI Chromosome chr1 scaffold_5, whole genome ... 80 4e-14 tr|A5BI27|A5BI27_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|B1Q3F1|B1Q3F1_SOLLC Glutamate decarboxylase isoform2 OS=Solan... 80 7e-14 tr|A3AM59|A3AM59_ORYSJ Putative uncharacterized protein OS=Oryza... 80 7e-14 tr|B8LQL2|B8LQL2_PICSI Putative uncharacterized protein OS=Picea... 79 9e-14 tr|B8LNM2|B8LNM2_PICSI Putative uncharacterized protein OS=Picea... 79 9e-14 tr|Q8LKR4|Q8LKR4_TOBAC Glutamate decarboxylase OS=Nicotiana taba... 79 1e-13 tr|Q84U04|Q84U04_ORYSJ Os03g0236200 protein OS=Oryza sativa subs... 79 1e-13 tr|A2XEB3|A2XEB3_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|A0EJ88|A0EJ88_9ROSI Glutamate decarboxylase OS=Populus tremul... 79 1e-13 tr|Q9AT17|Q9AT17_TOBAC Glutamate decarboxylase isozyme 1 OS=Nico... 78 2e-13 tr|Q8RXH0|Q8RXH0_ARATH Glutamate decarboxylase, putative OS=Arab... 78 2e-13 tr|Q8RVS4|Q8RVS4_ORYSA Glutamate decarboxylase (Fragment) OS=Ory... 78 2e-13
>tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105373 PE=3 SV=1 Length = 533
Score = 101 bits (252), Expect = 2e-20 Identities = 48/68 (70%), Positives = 57/68 (83%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVEA 185 LRRYGW VPAYTMAPDA+H+ L RVVVREDFS +LA RLV DI++VLD+ DAR PKL+E Sbjct: 399 LRRYGWTVPAYTMAPDAQHVTLLRVVVREDFSRSLANRLVTDIKRVLDHFDARPPKLIEV 458
Query: 186 VAVAIAQK 209 V A+AQ+ Sbjct: 459 VTAAVAQE 466
>tr|A9SDK9|A9SDK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127975 PE=3 SV=1 Length = 518
Score = 89.0 bits (219), Expect = 1e-16 Identities = 42/68 (61%), Positives = 53/68 (77%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVEA 185 LR YGW VPAYTMA DA+H+ L RVVVREDFS +L+ RL+ DI++VL Y DAR KL+EA Sbjct: 391 LRHYGWTVPAYTMAADAQHVTLLRVVVREDFSRSLSDRLLTDIKRVLAYFDARPSKLIEA 450
Query: 186 VAVAIAQK 209 V A+ ++ Sbjct: 451 VTAAVVEE 458
>tr|B6TT27|B6TT27_MAIZE Glutamate decarboxylase OS=Zea mays PE=2 SV=1 Length = 499
Score = 86.7 bits (213), Expect = 6e-16 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = +3
Query: 3 NLRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVE 182 NLRR+GWIVPAYTM DAEH+ + RVVVREDFS +LA+RLV D+RK+L LDARA V Sbjct: 398 NLRRFGWIVPAYTMPADAEHVAVLRVVVREDFSRSLAERLVSDVRKILRELDARATHAVR 457
Query: 183 AVAVAIAQK 209 VA A A++ Sbjct: 458 -VATATAEQ 465
>tr|Q7XJB3|Q7XJB3_SOYBN Putative glutamate decarboxylase (Fragment) OS=Glycine max GN=GAD PE=2 SV=1 Length = 450
Score = 84.3 bits (207), Expect = 3e-15 Identities = 38/69 (55%), Positives = 53/69 (76%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVEA 185 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LD+ +++ + Sbjct: 342 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELDSLPARVISS 401
Query: 186 VAVAIAQKE 212 V ++ +E Sbjct: 402 TTVTLSAEE 410
>tr|B1Q3F0|B1Q3F0_SOLLC Glutamate decarboxylase isoform1 OS=Solanum lycopersicum GN=LeGAD1 PE=2 SV=1 Length = 502
Score = 84.3 bits (207), Expect = 3e-15 Identities = 39/58 (67%), Positives = 48/58 (82%) Frame = +3
Query: 3 NLRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKL 176 +LRR+GWIVPAYTM PDAEHI + RVV+REDFS +LA+RLV DI K+L LD + P+L Sbjct: 395 HLRRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRL 452
>tr|A8C8H5|A8C8H5_SOYBN Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1 Length = 503
Score = 84.3 bits (207), Expect = 3e-15 Identities = 38/69 (55%), Positives = 53/69 (76%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVEA 185 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LD+ +++ + Sbjct: 395 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELDSLPARVISS 454
Query: 186 VAVAIAQKE 212 V ++ +E Sbjct: 455 TTVTLSAEE 463
>tr|A8C8H3|A8C8H3_SOYBN Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1 Length = 503
Score = 84.3 bits (207), Expect = 3e-15 Identities = 38/69 (55%), Positives = 53/69 (76%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLVEA 185 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LD+ +++ + Sbjct: 395 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELDSLPARVISS 454
Query: 186 VAVAIAQKE 212 +V + +E Sbjct: 455 TSVTVTAEE 463
>tr|Q8LLP2|Q8LLP2_ORYSJ Putative glutamate carboxylase OS=Oryza sativa subsp. japonica GN=OSJNBa0031O09.06 PE=3 SV=1 Length = 513
Score = 81.6 bits (200), Expect = 2e-14 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 4/73 (5%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLV-- 179 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LDA ++V Sbjct: 416 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVAN 475
Query: 180 --EAVAVAIAQKE 212 +A A + +++E Sbjct: 476 GGDAAAASASERE 488
>tr|Q6ASV4|Q6ASV4_ORYSJ Os03g0720300 protein OS=Oryza sativa subsp. japonica GN=B1377B10.13 PE=3 SV=1 Length = 492
Score = 81.6 bits (200), Expect = 2e-14 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 4/73 (5%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLV-- 179 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LDA ++V Sbjct: 395 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVAN 454
Query: 180 --EAVAVAIAQKE 212 +A A + +++E Sbjct: 455 GGDAAAASASERE 467
>tr|B8AQQ2|B8AQQ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13319 PE=4 SV=1 Length = 480
Score = 81.6 bits (200), Expect = 2e-14 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 4/73 (5%) Frame = +3
Query: 6 LRRYGWIVPAYTMAPDAEHICL*RVVVREDFSCTLAQRLVEDIRKVLDYLDARAPKLV-- 179 LRR+GWIVPAYTM PDA+H+ + RVV+REDFS TLA+RLV D+ KVL LDA ++V Sbjct: 383 LRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVAN 442
Query: 180 --EAVAVAIAQKE 212 +A A + +++E Sbjct: 443 GGDAAAASASERE 455
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