BP921416 |
Clone id |
YMU001_000149_F04 |
Library |
YMU01 |
Length |
459 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_F04. |
Accession |
BP921416 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCAAAGTGAAGCCTGCCTTCCAATAATTGACCATGATCAAAAACCCTTTAAATCGTCCAC TCAAGTACTTTTTTTGATACATGAACGAGCCAATTAGTTCAATGATAGCCATCACAATGC CTGCCACTAAGACATCCCAATCTCCTGTTTGTCCAAGGATTGTCGCCAGCGCATTTGCTG CATAGAAACCAAGGAGAACAAGGAAGATTTTCATTGGAAGTTTCTTCCGGCCTTCATTGA TTTTCCCAACAAGCTCGGTTCTTCTCTTCACTAAAACTTGGCTGAGGCGAGTGCCGATAG ACGCACTCTCACGGGTTCTGCTGCCAAGACCATTGTCAGATGTGAAGCTTGCCCTCACTC TCAGCGAAGTGGCCGGGCATTTGACATTCAGTCTTTCGAGCCCATGATCTCTGGGCCAGA ACGTTAATTGTATAGCTGAAAGTTCCTGCATCCCAACGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O80813 |
Definition |
sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana |
Align length |
154 |
Score (bit) |
126.0 |
E-value |
4.0e-29 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R4B3 |
Definition |
tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
99 |
Score (bit) |
116.0 |
E-value |
6.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921416|Adiantum capillus-veneris mRNA, clone: YMU001_000149_F04. (459 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, who... 116 6e-25 tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea m... 115 1e-24 tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment) OS=A... 115 1e-24 tr|Q84K02|Q84K02_ARATH Putative antigen receptor (Fragment) OS=A... 115 1e-24 tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa sub... 113 4e-24 tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza... 113 4e-24 tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza... 113 4e-24 tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subs... 111 2e-23 tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza... 110 3e-23 tr|B6SY75|B6SY75_MAIZE Putative uncharacterized protein OS=Zea m... 108 1e-22 tr|A9RW08|A9RW08_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 1e-21 tr|Q0DLP9|Q0DLP9_ORYSJ Os03g0852600 protein (Fragment) OS=Oryza ... 100 5e-20 tr|Q9LES5|Q9LES5_ARATH Putative uncharacterized protein T8M16_16... 95 2e-18 tr|Q2V3N7|Q2V3N7_ARATH Uncharacterized protein At3g56830.1 OS=Ar... 95 2e-18 tr|A7PYD5|A7PYD5_VITVI Chromosome chr15 scaffold_37, whole genom... 92 1e-17 tr|Q1ACD9|Q1ACD9_CHAVU Putative uncharacterized protein ycf20 OS... 75 2e-12 tr|B7JY13|B7JY13_SYNP8 Putative uncharacterized protein OS=Synec... 52 1e-05 tr|B4C2L8|B4C2L8_9CHRO Putative uncharacterized protein OS=Cyano... 52 1e-05 tr|A9BL80|A9BL80_9CRYP Putative uncharacterized protein OS=Crypt... 50 6e-05 tr|B2J391|B2J391_NOSP7 Putative uncharacterized protein OS=Nosto... 49 1e-04 tr|B5W7N3|B5W7N3_SPIMA Putative uncharacterized protein OS=Arthr... 48 3e-04 tr|A2CI67|A2CI67_CHLAT Hypothetical chloroplast RF20 OS=Chloroky... 47 4e-04 tr|B0JN13|B0JN13_MICAN Putative uncharacterized protein ycf20 OS... 46 0.001 tr|Q9AW17|Q9AW17_GUITH Putative uncharacterized protein OS=Guill... 44 0.003 tr|B4W5A6|B4W5A6_9CYAN Putative uncharacterized protein OS=Micro... 44 0.004 tr|A8YH83|A8YH83_MICAE Genome sequencing data, contig C313 OS=Mi... 44 0.004 tr|B8HYI1|B8HYI1_9CHRO Putative uncharacterized protein OS=Cyano... 43 0.007 tr|A0ZKS6|A0ZKS6_NODSP Putative uncharacterized protein OS=Nodul... 43 0.007 tr|Q4PIZ5|Q4PIZ5_CYACA Putative 9.5 kDa allophycocyanin linker p... 43 0.009
>tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004261001 PE=4 SV=1 Length = 209
Score = 116 bits (290), Expect = 6e-25 Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ +L+ K+N RK PMK+FL+LLGFY ANALATILGQTGDWDVLVAG+V Sbjct: 100 TRLGRIVSAGGRQLLAKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 159
Query: 112 MAIIELIGSFMYQK--KYLSGRFKGFLIMVNYWKAGFTL 2 +A IE IG +Y+K +GR + ++M+NYWKAG L Sbjct: 160 VAAIEGIGMLVYKKSSSQSTGRLQSLVVMINYWKAGVCL 198
>tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 115 bits (288), Expect = 1e-24 Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R P KIFLVLLGFY ANALATILGQTGDWDVLVAG+V Sbjct: 123 TRLGRLIQAAARELLDKLNSARTNSPTKIFLVLLGFYTANALATILGQTGDWDVLVAGVV 182
Query: 112 MAIIELIGSFMYQKKYL--SGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF+ + MVNYWKAG L Sbjct: 183 VAAIEGIGMLMYRKPIARPPGRFQSLISMVNYWKAGVCL 221
>tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment) OS=Arabidopsis lyrata GN=At1g65420 PE=4 SV=1 Length = 92
Score = 115 bits (287), Expect = 1e-24 Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 3/85 (3%) Frame = -3
Query: 256 ELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIVMAIIELIGSFMY 77 +L+GKIN RK PMKIFL+LLGFY ANALATILGQTGDWDVLVAGIV+A IE IG MY Sbjct: 7 QLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMY 66
Query: 76 QK---KYLSGRFKGFLIMVNYWKAG 11 +K SG+ + F++ +N+WKAG Sbjct: 67 KKPSSSMFSGKLQSFVVFMNFWKAG 91
>tr|Q84K02|Q84K02_ARATH Putative antigen receptor (Fragment) OS=Arabidopsis thaliana GN=At1g65420 PE=4 SV=1 Length = 92
Score = 115 bits (287), Expect = 1e-24 Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 3/85 (3%) Frame = -3
Query: 256 ELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIVMAIIELIGSFMY 77 +L+GKIN RK PMKIFL+LLGFY ANALATILGQTGDWDVLVAGIV+A IE IG MY Sbjct: 7 QLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMY 66
Query: 76 QK---KYLSGRFKGFLIMVNYWKAG 11 +K SG+ + F++ +N+WKAG Sbjct: 67 KKPSSSMFSGKLQSFVVFMNFWKAG 91
>tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa subsp. japonica GN=OJ1705_E12.41 PE=4 SV=1 Length = 217
Score = 113 bits (283), Expect = 4e-24 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R P KIFLVL GFY ANALATILGQTGDWDVLVAG+V Sbjct: 108 TRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAGVV 167
Query: 112 MAIIELIGSFMYQKKYL--SGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF+ + MVNYWKAG L Sbjct: 168 VAAIEGIGMLMYRKPMSRPPGRFQSLIAMVNYWKAGVCL 206
>tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06472 PE=4 SV=1 Length = 191
Score = 113 bits (283), Expect = 4e-24 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R P KIFLVL GFY ANALATILGQTGDWDVLVAG+V Sbjct: 82 TRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAGVV 141
Query: 112 MAIIELIGSFMYQKKYL--SGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF+ + MVNYWKAG L Sbjct: 142 VAAIEGIGMLMYRKPMSRPPGRFQSLIAMVNYWKAGVCL 180
>tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005828 PE=4 SV=1 Length = 167
Score = 113 bits (283), Expect = 4e-24 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R P KIFLVL GFY ANALATILGQTGDWDVLVAG+V Sbjct: 58 TRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAGVV 117
Query: 112 MAIIELIGSFMYQKKYL--SGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF+ + MVNYWKAG L Sbjct: 118 VAAIEGIGMLMYRKPMSRPPGRFQSLIAMVNYWKAGVCL 156
>tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subsp. japonica GN=P0663H05.33 PE=2 SV=1 Length = 196
Score = 111 bits (278), Expect = 2e-23 Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R K P KIFLVLLGFY ANALAT+LGQTGDWDV VA IV Sbjct: 87 TRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAAIV 146
Query: 112 MAIIELIGSFMYQK--KYLSGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF + MVNYWKAG L Sbjct: 147 VATIEGIGMLMYRKPASRPPGRFWSMITMVNYWKAGVCL 185
>tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30729 PE=4 SV=1 Length = 197
Score = 111 bits (278), Expect = 2e-23 Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R K P KIFLVLLGFY ANALAT+LGQTGDWDV VA IV Sbjct: 88 TRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAAIV 147
Query: 112 MAIIELIGSFMYQK--KYLSGRFKGFLIMVNYWKAGFTL 2 +A IE IG MY+K GRF + MVNYWKAG L Sbjct: 148 VATIEGIGMLMYRKPASRPPGRFWSMITMVNYWKAGVCL 186
>tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027559 PE=4 SV=1 Length = 344
Score = 110 bits (276), Expect = 3e-23 Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 2/96 (2%) Frame = -3
Query: 292 TRLSQVLVKRRTELVGKINEGRKKLPMKIFLVLLGFYAANALATILGQTGDWDVLVAGIV 113 TRL +++ EL+ K+N R K P KIFLVLLGFY ANALAT+LGQTGDWDV VA IV Sbjct: 87 TRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAAIV 146
Query: 112 MAIIELIGSFMYQK--KYLSGRFKGFLIMVNYWKAG 11 +A IE IG MY+K GRF + MVNYWKAG Sbjct: 147 VATIEGIGMLMYRKPASRPPGRFWSMITMVNYWKAG 182
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